RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 TXNDC16Q9P2K2 825 aa16.27■□□□□ 0.2
UBC-208ENST00000540700 KLHL42Q9P2K6 505 aa16.27■□□□□ 0.2
UBC-208ENST00000540700 TRMT6Q9UJA5 497 aaKnown RBP16.27■□□□□ 0.2
UBC-208ENST00000540700 ZNF180Q9UJW8 692 aa16.27■□□□□ 0.2
UBC-208ENST00000540700 F8W8V4 182 aa16.26■□□□□ 0.19
UBC-208ENST00000540700 APOA4P06727 396 aa16.26■□□□□ 0.19
UBC-208ENST00000540700 INHBAP08476 426 aa16.26■□□□□ 0.19
UBC-208ENST00000540700 SLC35G4P0C7Q5 338 aa16.26■□□□□ 0.19
UBC-208ENST00000540700 TPBGLP0DKB5 382 aa16.26■□□□□ 0.19
UBC-208ENST00000540700 MTHFD1P11586 935 aaKnown RBP16.26■□□□□ 0.19
UBC-208ENST00000540700 CKMT1AP12532 417 aa16.26■□□□□ 0.19
UBC-208ENST00000540700 XRCC1P18887 633 aaPredicted RBP16.26■□□□□ 0.19
UBC-208ENST00000540700 MAGEA12P43365 314 aa16.26■□□□□ 0.19
UBC-208ENST00000540700 SLCO1A2P46721 670 aa16.26■□□□□ 0.19
UBC-208ENST00000540700 DAB2P98082 770 aa16.26■□□□□ 0.19
UBC-208ENST00000540700 POU4F1Q01851 419 aa16.26■□□□□ 0.19
UBC-208ENST00000540700 ABRQ12979 859 aa16.26■□□□□ 0.19
UBC-208ENST00000540700 NR0B2Q15466 257 aa16.26■□□□□ 0.19
UBC-208ENST00000540700 RASGRP3Q8IV61 690 aa16.26■□□□□ 0.19
UBC-208ENST00000540700 CYP4X1Q8N118 509 aa16.26■□□□□ 0.19
UBC-208ENST00000540700 OR5AR1Q8NGP9 310 aa16.26■□□□□ 0.19
UBC-208ENST00000540700 MAPK15Q8TD08 544 aa16.26■□□□□ 0.19
UBC-208ENST00000540700 EEF1AKMT1Q8WVE0 214 aa16.26■□□□□ 0.19
UBC-208ENST00000540700 JPH3Q8WXH2 748 aaPredicted RBP16.26■□□□□ 0.19
UBC-208ENST00000540700 ZBTB9Q96C00 473 aa16.26■□□□□ 0.19
UBC-208ENST00000540700 IMP3Q9NV31 184 aaKnown RBP16.26■□□□□ 0.19
UBC-208ENST00000540700 CPNE7Q9UBL6 633 aa16.26■□□□□ 0.19
UBC-208ENST00000540700 FETUBQ9UGM5 382 aa16.26■□□□□ 0.19
UBC-208ENST00000540700 ARHGEF17Q96PE2 2063 aaPredicted RBP16.26■□□□□ 0.19
UBC-208ENST00000540700 PTPN13Q12923 2485 aa16.26■□□□□ 0.19
UBC-208ENST00000540700 KIR2DS5A0A0G2JLQ3 304 aa16.25■□□□□ 0.19
UBC-208ENST00000540700 A0A0G2JNG1 304 aa16.25■□□□□ 0.19
UBC-208ENST00000540700 EME2A4GXA9 379 aaPredicted RBP16.25■□□□□ 0.19
UBC-208ENST00000540700 B8ZZF3 427 aa16.25■□□□□ 0.19
UBC-208ENST00000540700 KIR2DS3K7RE56 304 aa16.25■□□□□ 0.19
UBC-208ENST00000540700 KLK10O43240 276 aa16.25■□□□□ 0.19
UBC-208ENST00000540700 SLC35E2BP0CK96 405 aa16.25■□□□□ 0.19
UBC-208ENST00000540700 H2AFXP16104 143 aaPredicted RBP16.25■□□□□ 0.19
UBC-208ENST00000540700 ZNF37AP17032 561 aaPredicted RBP16.25■□□□□ 0.19
UBC-208ENST00000540700 ACP1P24666 158 aa16.25■□□□□ 0.19
UBC-208ENST00000540700 ATP5DP30049 168 aa16.25■□□□□ 0.19
UBC-208ENST00000540700 FASLGP48023 281 aa16.25■□□□□ 0.19
UBC-208ENST00000540700 GABREP78334 506 aa16.25■□□□□ 0.19
UBC-208ENST00000540700 DLG1Q12959 904 aa16.25■□□□□ 0.19
UBC-208ENST00000540700 KIR2DS5Q14953 304 aa16.25■□□□□ 0.19
UBC-208ENST00000540700 TMED2Q15363 201 aa16.25■□□□□ 0.19
UBC-208ENST00000540700 MAP9Q49MG5 647 aa16.25■□□□□ 0.19
UBC-208ENST00000540700 CCSMST1Q4G0I0 132 aa16.25■□□□□ 0.19
UBC-208ENST00000540700 ZNF438Q7Z4V0 828 aa16.25■□□□□ 0.19
UBC-208ENST00000540700 CACTIN-AS1Q8N1I8 211 aa16.25■□□□□ 0.19
UBC-208ENST00000540700 SPATA6LQ8N4H0 392 aa16.25■□□□□ 0.19
UBC-208ENST00000540700 TFGQ92734 400 aaPredicted RBP16.25■□□□□ 0.19
UBC-208ENST00000540700 DLG3Q92796 817 aa16.25■□□□□ 0.19
UBC-208ENST00000540700 ISL2Q96A47 359 aa16.25■□□□□ 0.19
UBC-208ENST00000540700 LINGO1Q96FE5 620 aa16.25■□□□□ 0.19
UBC-208ENST00000540700 ZNF578Q96N58 590 aaPredicted RBP16.25■□□□□ 0.19
UBC-208ENST00000540700 UNKQ9C0B0 810 aaKnown RBP16.25■□□□□ 0.19
UBC-208ENST00000540700 SNX15Q9NRS6 342 aa16.25■□□□□ 0.19
UBC-208ENST00000540700 SLC24A2Q9UI40 661 aa16.25■□□□□ 0.19
UBC-208ENST00000540700 ADAMTS6Q9UKP5 1117 aa16.25■□□□□ 0.19
UBC-208ENST00000540700 PADI4Q9UM07 663 aa16.25■□□□□ 0.19
UBC-208ENST00000540700 PLAAQ9Y263 795 aa16.25■□□□□ 0.19
UBC-208ENST00000540700 SMIM23A6NLE4 172 aa16.24■□□□□ 0.19
UBC-208ENST00000540700 TRIM49D1C9J1S8 452 aa16.24■□□□□ 0.19
UBC-208ENST00000540700 KPNA5O15131 536 aa16.24■□□□□ 0.19
UBC-208ENST00000540700 SLC28A2O43868 658 aa16.24■□□□□ 0.19
UBC-208ENST00000540700 TCEA3O75764 348 aa16.24■□□□□ 0.19
UBC-208ENST00000540700 MATN4O95460 622 aa16.24■□□□□ 0.19
UBC-208ENST00000540700 HALP42357 657 aa16.24■□□□□ 0.19
UBC-208ENST00000540700 BDKRB1P46663 353 aa16.24■□□□□ 0.19
UBC-208ENST00000540700 UCNP55089 124 aa16.24■□□□□ 0.19
UBC-208ENST00000540700 RAB10P61026 200 aa16.24■□□□□ 0.19
UBC-208ENST00000540700 IRF9Q00978 393 aa16.24■□□□□ 0.19
UBC-208ENST00000540700 E2F1Q01094 437 aa16.24■□□□□ 0.19
UBC-208ENST00000540700 PLOD1Q02809 727 aaPredicted RBP16.24■□□□□ 0.19
UBC-208ENST00000540700 HHEXQ03014 270 aa16.24■□□□□ 0.19
UBC-208ENST00000540700 PDAP1Q13442 181 aaKnown RBP16.24■□□□□ 0.19
UBC-208ENST00000540700 GRB7Q14451 532 aa16.24■□□□□ 0.19
UBC-208ENST00000540700 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.24■□□□□ 0.19
UBC-208ENST00000540700 FBXO38Q6PIJ6 1188 aa16.24■□□□□ 0.19
UBC-208ENST00000540700 EFL1Q7Z2Z2 1120 aaKnown RBP16.24■□□□□ 0.19
UBC-208ENST00000540700 TDRPQ86YL5 185 aa16.24■□□□□ 0.19
UBC-208ENST00000540700 LMNTD1Q8N9Z9 388 aa16.24■□□□□ 0.19
UBC-208ENST00000540700 KCNE4Q8WWG9 221 aa16.24■□□□□ 0.19
UBC-208ENST00000540700 CCDC74AQ96AQ1 378 aa16.24■□□□□ 0.19
UBC-208ENST00000540700 WBP1Q96G27 269 aa16.24■□□□□ 0.19
UBC-208ENST00000540700 TBC1D10AQ9BXI6 508 aa16.24■□□□□ 0.19
UBC-208ENST00000540700 SLC40A1Q9NP59 571 aa16.24■□□□□ 0.19
UBC-208ENST00000540700 POT1Q9NUX5 634 aa16.24■□□□□ 0.19
UBC-208ENST00000540700 LRIT1Q9P2V4 623 aa16.24■□□□□ 0.19
UBC-208ENST00000540700 PSMC3IPQ9P2W1 217 aaPredicted RBP16.24■□□□□ 0.19
UBC-208ENST00000540700 CIDEBQ9UHD4 219 aa16.24■□□□□ 0.19
UBC-208ENST00000540700 COL12A1Q99715 3063 aa16.24■□□□□ 0.19
UBC-208ENST00000540700 CPED1A4D0V7 1026 aa16.23■□□□□ 0.19
UBC-208ENST00000540700 OR5K4A6NMS3 321 aa16.23■□□□□ 0.19
UBC-208ENST00000540700 RFPL1O75677 317 aa16.23■□□□□ 0.19
UBC-208ENST00000540700 MPC1LP0DKB6 136 aa16.23■□□□□ 0.19
UBC-208ENST00000540700 GLB1P16278 677 aa16.23■□□□□ 0.19
UBC-208ENST00000540700 SKIV2L2P42285 1042 aaKnown RBP16.23■□□□□ 0.19
UBC-208ENST00000540700 SERPINB9P50453 376 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms