RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 RPS18P62269 152 aaKnown RBP8.63□□□□□ -1.03
TRAPPC1-202ENST00000540486 XIAPP98170 497 aa8.63□□□□□ -1.03
TRAPPC1-202ENST00000540486 IL10RAQ13651 578 aa8.63□□□□□ -1.03
TRAPPC1-202ENST00000540486 LAMB3Q13751 1172 aa8.63□□□□□ -1.03
TRAPPC1-202ENST00000540486 ATP13A5Q4VNC0 1218 aa8.63□□□□□ -1.03
TRAPPC1-202ENST00000540486 KHDC1Q4VXA5 237 aaKnown RBP8.63□□□□□ -1.03
TRAPPC1-202ENST00000540486 MTFR2Q6P444 385 aa8.63□□□□□ -1.03
TRAPPC1-202ENST00000540486 CCDC137Q6PK04 289 aaKnown RBP8.63□□□□□ -1.03
TRAPPC1-202ENST00000540486 Q6ZS92 163 aa8.63□□□□□ -1.03
TRAPPC1-202ENST00000540486 GSTA5Q7RTV2 222 aa8.63□□□□□ -1.03
TRAPPC1-202ENST00000540486 MRGPRGQ86SM5 289 aa8.63□□□□□ -1.03
TRAPPC1-202ENST00000540486 PPP1R3BQ86XI6 285 aa8.63□□□□□ -1.03
TRAPPC1-202ENST00000540486 ZNF761Q86XN6 746 aaPredicted RBP8.63□□□□□ -1.03
TRAPPC1-202ENST00000540486 SFRP1Q8N474 314 aa8.63□□□□□ -1.03
TRAPPC1-202ENST00000540486 CCDC89Q8N998 374 aa8.63□□□□□ -1.03
TRAPPC1-202ENST00000540486 OR4K2Q8NGD2 314 aa8.63□□□□□ -1.03
TRAPPC1-202ENST00000540486 OR13C4Q8NGS5 318 aa8.63□□□□□ -1.03
TRAPPC1-202ENST00000540486 DTX3LQ8TDB6 740 aa8.63□□□□□ -1.03
TRAPPC1-202ENST00000540486 ADAMTS17Q8TE56 1095 aa8.63□□□□□ -1.03
TRAPPC1-202ENST00000540486 TM9SF4Q92544 642 aa8.63□□□□□ -1.03
TRAPPC1-202ENST00000540486 PLEKHG4BQ96PX9 1271 aa8.63□□□□□ -1.03
TRAPPC1-202ENST00000540486 NAPGQ99747 312 aaPredicted RBP8.63□□□□□ -1.03
TRAPPC1-202ENST00000540486 SPATA16Q9BXB7 569 aa8.63□□□□□ -1.03
TRAPPC1-202ENST00000540486 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.63□□□□□ -1.03
TRAPPC1-202ENST00000540486 STN1Q9H668 368 aaKnown RBP8.63□□□□□ -1.03
TRAPPC1-202ENST00000540486 LRRC40Q9H9A6 602 aa8.63□□□□□ -1.03
TRAPPC1-202ENST00000540486 ARFGAP3Q9NP61 516 aa8.63□□□□□ -1.03
TRAPPC1-202ENST00000540486 SARS2Q9NP81 518 aaKnown RBP8.63□□□□□ -1.03
TRAPPC1-202ENST00000540486 ATXN10Q9UBB4 475 aa8.63□□□□□ -1.03
TRAPPC1-202ENST00000540486 SUCOQ9UBS9 1254 aaKnown RBP8.63□□□□□ -1.03
TRAPPC1-202ENST00000540486 KLHL3Q9UH77 587 aa8.63□□□□□ -1.03
TRAPPC1-202ENST00000540486 ZNHIT2Q9UHR6 403 aa8.63□□□□□ -1.03
TRAPPC1-202ENST00000540486 SUFUQ9UMX1 484 aa8.63□□□□□ -1.03
TRAPPC1-202ENST00000540486 SAR1BQ9Y6B6 198 aa8.63□□□□□ -1.03
TRAPPC1-202ENST00000540486 ZNF469Q96JG9 3925 aaPredicted RBP8.63□□□□□ -1.03
TRAPPC1-202ENST00000540486 CSPG4Q6UVK1 2322 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 CTAGE9A4FU28 777 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 MROH6A6NGR9 719 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 C2orf81A6NN90 581 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 ERI2A8K979 691 aaKnown RBP8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 AGAP14A8MT82 685 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 CCL22O00626 93 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 E2F3O00716 465 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 STX7O15400 261 aaKnown RBP8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 GPR39O43194 453 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 PHF2O75151 1096 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 MTX2O75431 263 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 IPO13O94829 963 aaKnown RBP8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 SLC25A14O95258 325 aaPredicted RBP8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 KRT14P02533 472 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 C9P02748 559 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 PYGLP06737 847 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 C8BP07358 591 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 IVLP07476 585 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 FOSL1P15407 271 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 PSMA3P25788 255 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 ADCY8P40145 1251 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 ACTR1BP42025 376 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 TNNT3P45378 269 aaPredicted RBP8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 GNPDA1P46926 289 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 ACTR1AP61163 376 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 ETF1P62495 437 aaKnown RBP8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 TMPRSS15P98073 1019 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 PDE1BQ01064 536 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 HHEXQ03014 270 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 SRSF11Q05519 484 aaKnown RBP8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 PYCR3Q53H96 274 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 DOK6Q6PKX4 331 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 XKRXQ6PP77 449 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 RPTNQ6XPR3 784 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 ZNF517Q6ZMY9 492 aaPredicted RBP8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 ZNF534Q76KX8 674 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 ADGRG6Q86SQ4 1221 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 TGIF2LYQ8IUE0 185 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 ZADH2Q8N4Q0 377 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 CHDHQ8NE62 594 aaPredicted RBP8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 ZNF398Q8TD17 642 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 SLC37A2Q8TED4 501 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 CHTF18Q8WVB6 975 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 FAR1Q8WVX9 515 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 INPP5DQ92835 1189 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 GLYATL1Q969I3 302 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 CAPZA3Q96KX2 299 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 C9orf72Q96LT7 481 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 NAP1L3Q99457 506 aaPredicted RBP8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 ZSCAN5AQ9BUG6 496 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 DDX47Q9H0S4 455 aaKnown RBP8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 TRIM39Q9HCM9 518 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 RAD18Q9NS91 495 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.62□□□□□ -1.034e-7■■□□□ 12.6
TRAPPC1-202ENST00000540486 FEZ2Q9UHY8 353 aaPredicted RBP8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 PRKAB1Q9Y478 270 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 NBEAL1Q6ZS30 2694 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 ACANP16112 2415 aa8.62□□□□□ -1.03
TRAPPC1-202ENST00000540486 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.61□□□□□ -1.03
TRAPPC1-202ENST00000540486 TRBV23OR9-2A0A075B6M9 112 aa8.61□□□□□ -1.03
TRAPPC1-202ENST00000540486 GLYATL1P3A0A0U1RQE8 302 aa8.61□□□□□ -1.03
TRAPPC1-202ENST00000540486 E7EVH7 732 aa8.61□□□□□ -1.03
TRAPPC1-202ENST00000540486 NUAK1O60285 661 aa8.61□□□□□ -1.03
TRAPPC1-202ENST00000540486 ASMTLO95671 621 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms