RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 ANKRD34AQ69YU3 496 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 TIGD3Q6B0B8 471 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 CES3Q6UWW8 571 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 NECAB2Q7Z6G3 386 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 GPAT4Q86UL3 456 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 COMMD7Q86VX2 200 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 DNAJA4Q8WW22 397 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 KLHL6Q8WZ60 621 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 CIDECQ96AQ7 238 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 ACOX2Q99424 681 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 SPATA9Q9BWV2 254 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 CATSPERBQ9H7T0 1116 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 AGO3Q9H9G7 860 aaKnown RBP9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 ACOT13Q9NPJ3 140 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 FNIP2Q9P278 1114 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 AGO1Q9UL18 857 aaKnown RBP9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 MAFFQ9ULX9 164 aa9.3□□□□□ -0.92
CTNNA1-243ENST00000540387 LOC100130705A0A1B0GUX0 176 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 NR5A2O00482 541 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 OLFM2O95897 454 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 CYBBP04839 570 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 LCKP06239 509 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 RETP07949 1114 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 ALAS2P22557 587 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 MYL9P24844 172 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 MGAT1P26572 445 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 MIPP30301 263 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 LIMK2P53671 638 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 CDH6P55285 790 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 SLC35A2P78381 396 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 SCRN3Q0VDG4 424 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 SEMA3AQ14563 771 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 SYT16Q17RD7 645 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 TIGD7Q6NT04 549 aaPredicted RBP9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 CNSTQ6PJW8 725 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 PAMR1Q6UXH9 720 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 C15orf39Q6ZRI6 1047 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 STRA8Q7Z7C7 330 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 NLRP8Q86W28 1048 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 RIMKLAQ8IXN7 391 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 FAM126BQ8IXS8 530 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 BLOC1S5Q8TDH9 187 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 ARNTL2Q8WYA1 636 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 DUSP21Q9H596 190 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 APOBEC3GQ9HC16 384 aaKnown RBP9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 CYB5R1Q9UHQ9 305 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 KLHL21Q9UJP4 597 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 PIN4Q9Y237 131 aaKnown RBP9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 MFHAS1Q9Y4C4 1052 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 CSNK1G3Q9Y6M4 447 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 CITO14578 2027 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 BCLAF3A2AJT9 711 aaKnown RBP9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 CCDC182A6NF36 153 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 PRSS44E7EML9 344 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 F5H423 210 aaPredicted RBP9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 SMLR1H3BR10 107 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 DFFAO00273 331 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 DLX3O60479 287 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 PQBP1O60828 265 aaKnown RBP9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 PRSS23O95084 383 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 ALPPP05187 535 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 CKBP12277 381 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 PCSK2P16519 638 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 NPR3P17342 541 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 PGAM1P18669 254 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 CHRM3P20309 590 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 FRG1Q14331 258 aaKnown RBP9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 ZNF273Q14593 569 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 PCBP1Q15365 356 aaKnown RBP eCLIP9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 ZDHHC13Q8IUH4 622 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 HS3ST5Q8IZT8 346 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 ACVR1CQ8NER5 493 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 SLC38A4Q969I6 547 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 TNIP3Q96KP6 325 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 KLHL15Q96M94 604 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 RHNO1Q9BSD3 238 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 GTPBP2Q9BX10 602 aaKnown RBP9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 FAM83DQ9H4H8 585 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 SP110Q9HB58 689 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 BFARQ9NZS9 450 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 RNF112Q9ULX5 631 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 ST3GAL5Q9UNP4 418 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 TRAPPC4Q9Y296 219 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 U3KQV3 271 aa9.29□□□□□ -0.92
CTNNA1-243ENST00000540387 BBIP1A8MTZ0 92 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 G3V2T6 193 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 TNFRSF21O75509 655 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 TRUB2O95900 331 aaKnown RBP9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 STAG3L1P0CL83 205 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 HNRNPLP14866 589 aaKnown RBP eCLIP9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 PTX3P26022 381 aaPredicted RBP9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 SCNN1GP51170 649 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 MAP2K6P52564 334 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 IL5RAQ01344 420 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 VPS26BQ4G0F5 336 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 NOTUMQ6P988 496 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 SLC39A5Q6ZMH5 540 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 BNIPLQ7Z465 357 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 B3GNT8Q7Z7M8 397 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 PTRH1Q86Y79 214 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms