RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 STEAP3Q658P3 488 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 CLEC6AQ6EIG7 209 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 PIGZQ86VD9 579 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 PSTKQ8IV42 348 aaKnown RBP8.53□□□□□ -1.04
DDB1-217ENST00000540166 SLC22A9Q8IVM8 553 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 NDRG1Q92597 394 aaKnown RBP8.53□□□□□ -1.04
DDB1-217ENST00000540166 QKIQ96PU8 341 aaKnown RBP eCLIP8.53□□□□□ -1.04
DDB1-217ENST00000540166 ZBTB18Q99592 522 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 FSD1LQ9BXM9 530 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 ROGDIQ9GZN7 287 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 TBC1D17Q9HA65 648 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 QPCTLQ9NXS2 382 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 ZNF224Q9NZL3 707 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 MAT2BQ9NZL9 334 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 FNIP2Q9P278 1114 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 TMEM181Q9P2C4 612 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 MFHAS1Q9Y4C4 1052 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 GMPPBQ9Y5P6 360 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 U3KQV3 271 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 A0A1W2PRU2 124 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 XPNPEP2O43895 674 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 CYBBP04839 570 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 CYP4B1P13584 511 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 HGFP14210 728 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 YWHAQP27348 245 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 OXTRP30559 389 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 ACADSBP45954 432 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 BCAT1P54687 386 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 MLLT10P55197 1068 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 NIPAL4Q0D2K0 466 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 POU6F1Q14863 301 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 LINC00299Q6ZSB3 139 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 LYSMD2Q8IV50 215 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 SLC38A6Q8IZM9 456 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 MTERF3Q96E29 417 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 TSPAN17Q96FV3 270 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 AURKBQ96GD4 344 aaPredicted RBP8.53□□□□□ -1.04
DDB1-217ENST00000540166 LPIN3Q9BQK8 851 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 MRPL45Q9BRJ2 306 aaKnown RBP8.53□□□□□ -1.04
DDB1-217ENST00000540166 AIFM2Q9BRQ8 373 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 BEX2Q9BXY8 128 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 RHOJQ9H4E5 214 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 INSL5Q9Y5Q6 135 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 SPTBN2O15020 2390 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 NEMP2A6NFY4 417 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 DFFAO00273 331 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 SLC9A3R1O14745 358 aaPredicted RBP8.53□□□□□ -1.04
DDB1-217ENST00000540166 PDE9AO76083 593 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 NDST3O95803 873 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 ANXA6P08133 673 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 UBL4AP11441 157 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 GJA1P17302 382 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 WEE1P30291 646 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 AVPR2P30518 371 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 FMO3P31513 532 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 OR3A3P47888 321 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 IFITM2Q01629 132 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 RAB33AQ14088 237 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 TAB1Q15750 504 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 PDZK1Q5T2W1 519 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 NAPEPLDQ6IQ20 393 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 TAS1R1Q7RTX1 841 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 CENPLQ8N0S6 344 aaPredicted RBP8.53□□□□□ -1.04
DDB1-217ENST00000540166 OR6P1Q8NGX9 317 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 FGF13Q92913 245 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 LRRC58Q96CX6 371 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 C19orf60Q96EN9 201 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 MID1IP1Q9NPA3 183 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 MAGEL2Q9UJ55 1249 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 TTC3P53804 2025 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 A0A0G2JMZ2 1700 aa8.53□□□□□ -1.04
DDB1-217ENST00000540166 RLFQ13129 1914 aa8.52□□□□□ -1.04
DDB1-217ENST00000540166 UBXN8O00124 270 aa8.52□□□□□ -1.04
DDB1-217ENST00000540166 NME4O00746 187 aa8.52□□□□□ -1.04
DDB1-217ENST00000540166 IL7P13232 177 aa8.52□□□□□ -1.04
DDB1-217ENST00000540166 MSH3P20585 1137 aa8.52□□□□□ -1.04
DDB1-217ENST00000540166 IMPDH1P20839 514 aa8.52□□□□□ -1.04
DDB1-217ENST00000540166 AZGP1P25311 298 aaKnown RBP8.52□□□□□ -1.04
DDB1-217ENST00000540166 AFF1P51825 1210 aaKnown RBP8.52□□□□□ -1.04
DDB1-217ENST00000540166 CSTF1Q05048 431 aaKnown RBP8.52□□□□□ -1.04
DDB1-217ENST00000540166 ADIGQ0VDE8 80 aa8.52□□□□□ -1.04
DDB1-217ENST00000540166 CDC20Q12834 499 aa8.52□□□□□ -1.04
DDB1-217ENST00000540166 AQP6Q13520 282 aa8.52□□□□□ -1.04
DDB1-217ENST00000540166 DDR2Q16832 855 aa8.52□□□□□ -1.04
DDB1-217ENST00000540166 RFX4Q33E94 735 aa8.52□□□□□ -1.04
DDB1-217ENST00000540166 KLHL17Q6TDP4 642 aa8.52□□□□□ -1.04
DDB1-217ENST00000540166 SPATC1Q76KD6 591 aa8.52□□□□□ -1.04
DDB1-217ENST00000540166 LACC1Q8IV20 430 aa8.52□□□□□ -1.04
DDB1-217ENST00000540166 ADGRG5Q8IZF4 528 aa8.52□□□□□ -1.04
DDB1-217ENST00000540166 TMEM86AQ8N2M4 240 aa8.52□□□□□ -1.04
DDB1-217ENST00000540166 PPHLN1Q8NEY8 458 aaKnown RBP8.52□□□□□ -1.04
DDB1-217ENST00000540166 SLC2A14Q8TDB8 520 aa8.52□□□□□ -1.04
DDB1-217ENST00000540166 SNAPC3Q92966 411 aa8.52□□□□□ -1.04
DDB1-217ENST00000540166 FBXO32Q969P5 355 aa8.52□□□□□ -1.04
DDB1-217ENST00000540166 PMEPA1Q969W9 287 aa8.52□□□□□ -1.04
DDB1-217ENST00000540166 PHF21AQ96BD5 680 aa8.52□□□□□ -1.04
DDB1-217ENST00000540166 BCL7BQ9BQE9 202 aa8.52□□□□□ -1.04
DDB1-217ENST00000540166 TRIM8Q9BZR9 551 aa8.52□□□□□ -1.04
DDB1-217ENST00000540166 SMURF2Q9HAU4 748 aa8.52□□□□□ -1.04
DDB1-217ENST00000540166 ING3Q9NXR8 418 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms