RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 ARPC2O15144 300 aa9.8□□□□□ -0.84
TRAF1-202ENST00000540010 SLC7A4O43246 635 aa9.8□□□□□ -0.84
TRAF1-202ENST00000540010 NIPSNAP2O75323 286 aa9.8□□□□□ -0.84
TRAF1-202ENST00000540010 STK16O75716 305 aa9.8□□□□□ -0.84
TRAF1-202ENST00000540010 CCNKO75909 580 aa9.8□□□□□ -0.84
TRAF1-202ENST00000540010 BCAS2O75934 225 aaPredicted RBP9.8□□□□□ -0.84
TRAF1-202ENST00000540010 PEX11BO96011 259 aa9.8□□□□□ -0.84
TRAF1-202ENST00000540010 UROSP10746 265 aa9.8□□□□□ -0.84
TRAF1-202ENST00000540010 ZNF182P17025 639 aaPredicted RBP9.8□□□□□ -0.84
TRAF1-202ENST00000540010 CTNNB1P35222 781 aa9.8□□□□□ -0.84
TRAF1-202ENST00000540010 HPCAL1P37235 193 aa9.8□□□□□ -0.84
TRAF1-202ENST00000540010 GSK3BP49841 420 aa9.8□□□□□ -0.84
TRAF1-202ENST00000540010 SGSHP51688 502 aa9.8□□□□□ -0.84
TRAF1-202ENST00000540010 TCEAL8Q8IYN2 117 aa9.8□□□□□ -0.84
TRAF1-202ENST00000540010 KBTBD8Q8NFY9 601 aa9.8□□□□□ -0.84
TRAF1-202ENST00000540010 ARRDC2Q8TBH0 407 aa9.8□□□□□ -0.84
TRAF1-202ENST00000540010 STYXQ8WUJ0 223 aa9.8□□□□□ -0.84
TRAF1-202ENST00000540010 COL26A1Q96A83 441 aa9.8□□□□□ -0.84
TRAF1-202ENST00000540010 TAMM41Q96BW9 452 aa9.8□□□□□ -0.84
TRAF1-202ENST00000540010 CRISPLD2Q9H0B8 497 aa9.8□□□□□ -0.84
TRAF1-202ENST00000540010 ABCB9Q9NP78 766 aa9.8□□□□□ -0.84
TRAF1-202ENST00000540010 ZNF624Q9P2J8 865 aaPredicted RBP9.8□□□□□ -0.84
TRAF1-202ENST00000540010 SCN5AQ14524 2016 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 TRAV19A0A0A6YYK7 116 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 A0A1B0GVG6 124 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 A0A1W2PRU2 124 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 MUSKO15146 869 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 CCL16O15467 120 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 IMPDH1P20839 514 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 INTS11Q5TA45 600 aaKnown RBP9.79□□□□□ -0.84
TRAF1-202ENST00000540010 DPF3Q92784 378 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 TRIM43Q96BQ3 446 aaPredicted RBP9.79□□□□□ -0.84
TRAF1-202ENST00000540010 PRICKLE1Q96MT3 831 aaPredicted RBP9.79□□□□□ -0.84
TRAF1-202ENST00000540010 SLC22A12Q96S37 553 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 KLF16Q9BXK1 252 aaPredicted RBP9.79□□□□□ -0.84
TRAF1-202ENST00000540010 RMI1Q9H9A7 625 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 ASAH2Q9NR71 780 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 UBAP1Q9NZ09 502 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 AHSPQ9NZD4 102 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 PRKAB1Q9Y478 270 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 H0Y858 1186 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 FUT4P22083 530 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 PRKACGP22612 351 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 SLC26A3P40879 764 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 GJA8P48165 433 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 LAPTM5Q13571 262 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 UBE2R2Q712K3 238 aaPredicted RBP9.79□□□□□ -0.84
TRAF1-202ENST00000540010 CHST9Q7L1S5 443 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 FGD2Q7Z6J4 655 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 RBFAQ8N0V3 343 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 TEX26Q8N6G2 289 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 TXNDC5Q8NBS9 432 aaKnown RBP9.79□□□□□ -0.84
TRAF1-202ENST00000540010 C2CD4AQ8NCU7 369 aaPredicted RBP9.79□□□□□ -0.84
TRAF1-202ENST00000540010 KREMEN2Q8NCW0 462 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 BRSK1Q8TDC3 778 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 ZFAND2BQ8WV99 257 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 TRMT2BQ96GJ1 504 aaKnown RBP9.79□□□□□ -0.84
TRAF1-202ENST00000540010 MYRFLQ96LU7 910 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 BBS4Q96RK4 519 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 TCF25Q9BQ70 676 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 SERHL2Q9H4I8 314 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 ZFYVE1Q9HBF4 777 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 SERHLQ9NQF3 203 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 MAP10Q9P2G4 905 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 HSFX1Q9UBD0 423 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 EVLQ9UI08 416 aaPredicted RBP9.79□□□□□ -0.84
TRAF1-202ENST00000540010 AP3M1Q9Y2T2 418 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 TGM5O43548 720 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 NDUFS2O75306 463 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 UMPSP11172 480 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 MYCLP1P12525 358 aaPredicted RBP9.79□□□□□ -0.84
TRAF1-202ENST00000540010 FMO3P31513 532 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 GPR153Q6NV75 609 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 ZFP28Q8NHY6 868 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 MAPK15Q8TD08 544 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 WBP2Q969T9 261 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 PSKH2Q96QS6 385 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 ARNT2Q9HBZ2 717 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 ZNF334Q9HCZ1 680 aaPredicted RBP9.79□□□□□ -0.84
TRAF1-202ENST00000540010 KLHL28Q9NXS3 571 aa9.79□□□□□ -0.84
TRAF1-202ENST00000540010 FRMPD3Q5JV73 1810 aa9.78□□□□□ -0.84
TRAF1-202ENST00000540010 ARID1BQ8NFD5 2236 aaPredicted RBP9.78□□□□□ -0.84
TRAF1-202ENST00000540010 A6NHS1 94 aa9.78□□□□□ -0.84
TRAF1-202ENST00000540010 H0YC42 278 aa9.78□□□□□ -0.84
TRAF1-202ENST00000540010 AURKAO14965 403 aa9.78□□□□□ -0.84
TRAF1-202ENST00000540010 TLL1O43897 1013 aa9.78□□□□□ -0.84
TRAF1-202ENST00000540010 GLUD1P00367 558 aa9.78□□□□□ -0.84
TRAF1-202ENST00000540010 SLC6A2P23975 617 aa9.78□□□□□ -0.84
TRAF1-202ENST00000540010 ITGB8P26012 769 aa9.78□□□□□ -0.84
TRAF1-202ENST00000540010 HOXD9P28356 352 aaPredicted RBP9.78□□□□□ -0.84
TRAF1-202ENST00000540010 ARCN1P48444 511 aaKnown RBP9.78□□□□□ -0.84
TRAF1-202ENST00000540010 ARSDP51689 593 aa9.78□□□□□ -0.84
TRAF1-202ENST00000540010 DIO3P55073 304 aa9.78□□□□□ -0.84
TRAF1-202ENST00000540010 MXD1Q05195 221 aa9.78□□□□□ -0.84
TRAF1-202ENST00000540010 SFSWAPQ12872 951 aaKnown RBP9.78□□□□□ -0.84
TRAF1-202ENST00000540010 RFTN1Q14699 578 aaPredicted RBP9.78□□□□□ -0.84
TRAF1-202ENST00000540010 LAPTM4AQ15012 233 aa9.78□□□□□ -0.84
TRAF1-202ENST00000540010 TAB1Q15750 504 aa9.78□□□□□ -0.84
TRAF1-202ENST00000540010 MYLK3Q32MK0 819 aa9.78□□□□□ -0.84
TRAF1-202ENST00000540010 ZBED5Q49AG3 693 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms