RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 CTDSP2O14595 271 aa12.36□□□□□ -0.43
DDX55-206ENST00000539934 USP12O75317 370 aa12.36□□□□□ -0.43
DDX55-206ENST00000539934 IFNB1P01574 187 aa12.36□□□□□ -0.43
DDX55-206ENST00000539934 EPOP01588 193 aa12.36□□□□□ -0.43
DDX55-206ENST00000539934 ITGAVP06756 1048 aa12.36□□□□□ -0.43
DDX55-206ENST00000539934 KLRC2P26717 231 aa12.36□□□□□ -0.43
DDX55-206ENST00000539934 PIK3R1P27986 724 aa12.36□□□□□ -0.43
DDX55-206ENST00000539934 PCSK1P29120 753 aa12.36□□□□□ -0.43
DDX55-206ENST00000539934 CASP3P42574 277 aa12.36□□□□□ -0.43
DDX55-206ENST00000539934 BRCC3P46736 316 aa12.36□□□□□ -0.43
DDX55-206ENST00000539934 ARSEP51690 589 aa12.36□□□□□ -0.43
DDX55-206ENST00000539934 ERVFC1P60507 584 aa12.36□□□□□ -0.43
DDX55-206ENST00000539934 TEKQ02763 1124 aa12.36□□□□□ -0.43
DDX55-206ENST00000539934 LIPEQ05469 1076 aa12.36□□□□□ -0.43
DDX55-206ENST00000539934 MMRN1Q13201 1228 aa12.36□□□□□ -0.43
DDX55-206ENST00000539934 PDK2Q15119 407 aa12.36□□□□□ -0.43
DDX55-206ENST00000539934 TUSC1Q2TAM9 212 aa12.36□□□□□ -0.43
DDX55-206ENST00000539934 ARCQ7LC44 396 aa12.36□□□□□ -0.43
DDX55-206ENST00000539934 SLC35B2Q8TB61 432 aa12.36□□□□□ -0.43
DDX55-206ENST00000539934 KCTD13Q8WZ19 329 aa12.36□□□□□ -0.43
DDX55-206ENST00000539934 MTFMTQ96DP5 389 aaKnown RBP12.36□□□□□ -0.43
DDX55-206ENST00000539934 PCED1BQ96HM7 432 aa12.36□□□□□ -0.43
DDX55-206ENST00000539934 TMEM121Q9BTD3 319 aa12.36□□□□□ -0.43
DDX55-206ENST00000539934 TMEM120AQ9BXJ8 343 aa12.36□□□□□ -0.43
DDX55-206ENST00000539934 RGS18Q9NS28 235 aa12.36□□□□□ -0.43
DDX55-206ENST00000539934 ACOXLQ9NUZ1 547 aa12.36□□□□□ -0.43
DDX55-206ENST00000539934 GPATCH2LQ9NWQ4 482 aa12.36□□□□□ -0.43
DDX55-206ENST00000539934 ZNF221Q9UK13 617 aa12.36□□□□□ -0.43
DDX55-206ENST00000539934 CHKBQ9Y259 395 aa12.36□□□□□ -0.43
DDX55-206ENST00000539934 TMEM210A6NLX4 147 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 J3QRK9 145 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 APOC4-APOC2K7ER74 178 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 SCAMP3O14828 347 aaKnown RBP12.35□□□□□ -0.43
DDX55-206ENST00000539934 SNAP91O60641 907 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 KRT37O76014 449 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 GOT2P00505 430 aaKnown RBP12.35□□□□□ -0.43
DDX55-206ENST00000539934 APOC2P02655 101 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 DNTTP04053 509 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 NTRK1P04629 796 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 BMI1P35226 326 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 MAPK9P45984 424 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 THOC5Q13769 683 aaKnown RBP12.35□□□□□ -0.43
DDX55-206ENST00000539934 TFDP2Q14188 446 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 DPYSL3Q14195 570 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 CBX2Q14781 532 aaPredicted RBP12.35□□□□□ -0.43
DDX55-206ENST00000539934 ZNF846Q147U1 533 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 EIF2S3LQ2VIR3 472 aaKnown RBP12.35□□□□□ -0.43
DDX55-206ENST00000539934 RSBN1Q5VWQ0 802 aaPredicted RBP12.35□□□□□ -0.43
DDX55-206ENST00000539934 GLB1LQ6UWU2 654 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 LINC00299Q6ZSB3 139 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 SLC24A5Q71RS6 500 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 ZNF767PQ75MW2 155 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 CDH24Q86UP0 819 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 FAM35AQ86V20 835 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 TMEM105Q8N8V8 129 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 KDF1Q8NAX2 398 aaPredicted RBP12.35□□□□□ -0.43
DDX55-206ENST00000539934 GPR156Q8NFN8 814 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 FBXL8Q96CD0 374 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 PRRX2Q99811 253 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 ZNF251Q9BRH9 671 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 SNRNP25Q9BV90 132 aaKnown RBP12.35□□□□□ -0.43
DDX55-206ENST00000539934 B3GNT2Q9NY97 397 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 COX16Q9P0S2 106 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 HRH3Q9Y5N1 445 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 MDM4O15151 490 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 SPAG7O75391 227 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 PIAS2O75928 621 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 ENDOD1O94919 500 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 CDK1P06493 297 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 ZSCAN5DPP0CG00 497 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 ETS1P14921 441 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 TFE3P19532 575 aaPredicted RBP12.35□□□□□ -0.43
DDX55-206ENST00000539934 IMPDH1P20839 514 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 HPCAL1P37235 193 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 ARCN1P48444 511 aaKnown RBP12.35□□□□□ -0.43
DDX55-206ENST00000539934 SERPINH1P50454 418 aaKnown RBP12.35□□□□□ -0.43
DDX55-206ENST00000539934 ATXN1P54253 815 aaKnown RBP12.35□□□□□ -0.43
DDX55-206ENST00000539934 SCARB2Q14108 478 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 INAVAQ3KP66 663 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 RHBDF2Q6PJF5 856 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 DNAJB7Q7Z6W7 309 aaPredicted RBP12.35□□□□□ -0.43
DDX55-206ENST00000539934 DHDDSQ86SQ9 333 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 GALNT12Q8IXK2 581 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 DEFB106AQ8N104 65 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 C4orf33Q8N1A6 199 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 C12orf43Q96C57 262 aaKnown RBP12.35□□□□□ -0.43
DDX55-206ENST00000539934 CSPG4P5Q96PW8 444 aa12.35□□□□□ -0.43
DDX55-206ENST00000539934 BARD1Q99728 777 aaKnown RBP12.35□□□□□ -0.43
DDX55-206ENST00000539934 MRPS30Q9NP92 439 aaKnown RBP12.35□□□□□ -0.43
DDX55-206ENST00000539934 H3BMM5 538 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 EOMESO95936 686 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 ASGR2P07307 311 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 CD63P08962 238 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 NUDT17P0C025 328 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 DDCP20711 480 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 PBX3P40426 434 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 MATKP42679 507 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 AQP4P55087 323 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 CDH4P55283 916 aa12.34□□□□□ -0.43
DDX55-206ENST00000539934 EIF3EP60228 445 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms