RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 FOXR2Q6PJQ5 311 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 SLITRK4Q8IW52 837 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 ENDOVQ8N8Q3 282 aaKnown RBP7.42□□□□□ -1.22
GNE-205ENST00000539815 TMEM125Q96AQ2 219 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 NUDCD1Q96RS6 583 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 TRIM39Q9HCM9 518 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 FANCLQ9NW38 375 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 EPHA6Q9UF33 1036 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 MRPS18BQ9Y676 258 aaKnown RBP7.42□□□□□ -1.22
GNE-205ENST00000539815 JMJD1CQ15652 2540 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 ARPC4-TTLL3A0A0A6YYG9 625 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 MEN1O00255 615 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 CCL21O00585 134 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 DNAJB5O75953 348 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 FGF1P05230 155 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 NOMO3P69849 1222 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 ZCWPW2Q504Y3 356 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 HSP90AA5PQ58FG0 334 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 ITPRIPL1Q6GPH6 555 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 DET1Q7L5Y6 550 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 GSPT2Q8IYD1 628 aaKnown RBP7.42□□□□□ -1.22
GNE-205ENST00000539815 UMODL1-AS1Q8N2C9 162 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 PYROXD2Q8N2H3 581 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 OR1N1Q8NGS0 311 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 SCRN2Q96FV2 425 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 CGREF1Q99674 301 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 PRMT1Q99873 361 aaKnown RBP7.42□□□□□ -1.22
GNE-205ENST00000539815 HGH1Q9BTY7 390 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 HPSEQ9Y251 543 aa7.42□□□□□ -1.22
GNE-205ENST00000539815 LILRA5A6NI73 299 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 PCP4L1A6NKN8 68 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 OR2AG2A6NM03 316 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 GOLGA8TH3BQL2 631 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 MASP2O00187 686 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 PRRG2O14669 202 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 FTLP02792 175 aaPredicted RBP7.41□□□□□ -1.22
GNE-205ENST00000539815 PIRTP0C851 137 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 PMS1P54277 932 aaKnown RBP7.41□□□□□ -1.22
GNE-205ENST00000539815 GFERP55789 205 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 CNPY1Q3B7I2 92 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 LINC00303Q3SY05 128 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 SP5Q6BEB4 398 aaPredicted RBP7.41□□□□□ -1.22
GNE-205ENST00000539815 ZNF787Q6DD87 383 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 IYDQ6PHW0 289 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 TBC1D1Q86TI0 1168 aaPredicted RBP7.41□□□□□ -1.22
GNE-205ENST00000539815 PALM2Q8IXS6 379 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 IPMKQ8NFU5 416 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 OR52K2Q8NGK3 314 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 JOSD2Q8TAC2 188 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 PTERQ96BW5 349 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 PGAP3Q96FM1 320 aaPredicted RBP7.41□□□□□ -1.22
GNE-205ENST00000539815 C9orf72Q96LT7 481 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 NSMCE3Q96MG7 304 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 CCT8L2Q96SF2 557 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 SNRNP25Q9BV90 132 aaKnown RBP7.41□□□□□ -1.22
GNE-205ENST00000539815 TLR10Q9BXR5 811 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 KLHL25Q9H0H3 589 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 PILRAQ9UKJ1 303 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 TLCD2A6NGC4 264 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 CLDN7O95471 211 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 LSP1P33241 339 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 CD86P42081 329 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 SKP1P63208 163 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 SLC10A7Q0GE19 358 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 MRPL28Q13084 256 aaKnown RBP7.41□□□□□ -1.22
GNE-205ENST00000539815 GNA13Q14344 377 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 TPRG1LQ5T0D9 272 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 WDR74Q6RFH5 385 aaPredicted RBP7.41□□□□□ -1.22
GNE-205ENST00000539815 ARHGEF18Q6ZSZ5 1173 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 KANSL1Q7Z3B3 1105 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 MCEMP1Q8IX19 187 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 CFAP206Q8IYR0 622 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 FAM71AQ8IYT1 594 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 NAGSQ8N159 534 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 GALNT16Q8N428 558 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 TBC1D19Q8N5T2 526 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 HORMAD2Q8N7B1 307 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 ALG14Q96F25 216 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 CCDC177Q9NQR7 707 aaPredicted RBP7.41□□□□□ -1.22
GNE-205ENST00000539815 INTUQ9ULD6 942 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 ZNF148Q9UQR1 794 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 CFAP20Q9Y6A4 193 aaKnown RBP7.41□□□□□ -1.22
GNE-205ENST00000539815 DSPP15924 2871 aaKnown RBP7.41□□□□□ -1.22
GNE-205ENST00000539815 GMNNO75496 209 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 JRKO75564 520 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 SERPINB7O75635 380 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 PGLSO95336 258 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 TUBB4AP04350 444 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 TFPTP0C1Z6 253 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 ADARP55265 1226 aaKnown RBP7.41□□□□□ -1.22
GNE-205ENST00000539815 RPS18P62269 152 aaKnown RBP7.41□□□□□ -1.22
GNE-205ENST00000539815 HPCAP84074 193 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 MRPL49Q13405 166 aaKnown RBP7.41□□□□□ -1.22
GNE-205ENST00000539815 NR1D2Q14995 579 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 CCDC14Q49A88 953 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 FMR1NBQ8N0W7 255 aaPredicted RBP7.41□□□□□ -1.22
GNE-205ENST00000539815 CA5BP1Q8WTZ4 195 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 PNPLA2Q96AD5 504 aa7.41□□□□□ -1.22
GNE-205ENST00000539815 DNAJC1Q96KC8 554 aaKnown RBP7.41□□□□□ -1.22
GNE-205ENST00000539815 MCCC1Q96RQ3 725 aaPredicted RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms