RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 SPESP1Q6UW49 350 aa16.23■□□□□ 0.19
DDB1-215ENST00000539712 CDHR3Q6ZTQ4 885 aa16.23■□□□□ 0.19
DDB1-215ENST00000539712 GSTA5Q7RTV2 222 aa16.23■□□□□ 0.19
DDB1-215ENST00000539712 TRIM73Q86UV7 250 aa16.23■□□□□ 0.19
DDB1-215ENST00000539712 MS4A14Q96JA4 679 aa16.23■□□□□ 0.19
DDB1-215ENST00000539712 LRFN5Q96NI6 719 aa16.23■□□□□ 0.19
DDB1-215ENST00000539712 ACTL8Q9H568 366 aa16.23■□□□□ 0.19
DDB1-215ENST00000539712 FAM60AQ9NP50 221 aa16.23■□□□□ 0.19
DDB1-215ENST00000539712 HOMER3Q9NSC5 361 aa16.23■□□□□ 0.19
DDB1-215ENST00000539712 CATSPERZQ9NTU4 200 aa16.23■□□□□ 0.19
DDB1-215ENST00000539712 SYBUQ9NX95 663 aa16.23■□□□□ 0.19
DDB1-215ENST00000539712 PCDHB3Q9Y5E6 796 aa16.23■□□□□ 0.19
DDB1-215ENST00000539712 PRRC2CQ9Y520 2896 aaKnown RBP16.23■□□□□ 0.19
DDB1-215ENST00000539712 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.22■□□□□ 0.19
DDB1-215ENST00000539712 CPNE3O75131 537 aaKnown RBP16.22■□□□□ 0.19
DDB1-215ENST00000539712 SLCO2B1O94956 709 aa16.22■□□□□ 0.19
DDB1-215ENST00000539712 CAPN1P07384 714 aa16.22■□□□□ 0.19
DDB1-215ENST00000539712 CHRM5P08912 532 aaPredicted RBP16.22■□□□□ 0.19
DDB1-215ENST00000539712 UGT2B7P16662 529 aa16.22■□□□□ 0.19
DDB1-215ENST00000539712 MGAT1P26572 445 aa16.22■□□□□ 0.19
DDB1-215ENST00000539712 PEBP1P30086 187 aaKnown RBP16.22■□□□□ 0.19
DDB1-215ENST00000539712 SHMT2P34897 504 aa16.22■□□□□ 0.19
DDB1-215ENST00000539712 GABRA4P48169 554 aa16.22■□□□□ 0.19
DDB1-215ENST00000539712 RPS18P62269 152 aaKnown RBP16.22■□□□□ 0.19
DDB1-215ENST00000539712 CDK16Q00536 496 aa16.22■□□□□ 0.19
DDB1-215ENST00000539712 TRIP13Q15645 432 aaPredicted RBP16.22■□□□□ 0.19
DDB1-215ENST00000539712 ANKRD22Q5VYY1 191 aa16.22■□□□□ 0.19
DDB1-215ENST00000539712 CES3Q6UWW8 571 aa16.22■□□□□ 0.19
DDB1-215ENST00000539712 TMEM126BQ8IUX1 230 aa16.22■□□□□ 0.19
DDB1-215ENST00000539712 KRT222Q8N1A0 295 aa16.22■□□□□ 0.19
DDB1-215ENST00000539712 MFSD3Q96ES6 412 aa16.22■□□□□ 0.19
DDB1-215ENST00000539712 TTC1Q99614 292 aa16.22■□□□□ 0.19
DDB1-215ENST00000539712 GPR87Q9BY21 358 aa16.22■□□□□ 0.19
DDB1-215ENST00000539712 FAM117AQ9C073 453 aa16.22■□□□□ 0.19
DDB1-215ENST00000539712 CHST8Q9H2A9 424 aa16.22■□□□□ 0.19
DDB1-215ENST00000539712 SYTL2Q9HCH5 934 aa16.22■□□□□ 0.19
DDB1-215ENST00000539712 OR6C2Q9NZP2 312 aa16.22■□□□□ 0.19
DDB1-215ENST00000539712 POLG2Q9UHN1 485 aa16.22■□□□□ 0.19
DDB1-215ENST00000539712 TTC7AQ9ULT0 858 aaPredicted RBP16.22■□□□□ 0.19
DDB1-215ENST00000539712 PLAGL1Q9UM63 463 aa16.22■□□□□ 0.19
DDB1-215ENST00000539712 NEU2Q9Y3R4 380 aa16.22■□□□□ 0.19
DDB1-215ENST00000539712 SNRNP200O75643 2136 aaKnown RBP16.21■□□□□ 0.19
DDB1-215ENST00000539712 PIPSLA2A3N6 862 aa16.21■□□□□ 0.19
DDB1-215ENST00000539712 TMEM150CB9EJG8 249 aa16.21■□□□□ 0.19
DDB1-215ENST00000539712 MEN1O00255 615 aa16.21■□□□□ 0.19
DDB1-215ENST00000539712 PRMT5O14744 637 aaPredicted RBP16.21■□□□□ 0.19
DDB1-215ENST00000539712 AVILO75366 819 aa16.21■□□□□ 0.19
DDB1-215ENST00000539712 CTSBP07858 339 aa16.21■□□□□ 0.19
DDB1-215ENST00000539712 PTPN4P29074 926 aa16.21■□□□□ 0.19
DDB1-215ENST00000539712 TTPAP49638 278 aa16.21■□□□□ 0.19
DDB1-215ENST00000539712 HSPA14Q0VDF9 509 aa16.21■□□□□ 0.19
DDB1-215ENST00000539712 SYTL3Q4VX76 610 aa16.21■□□□□ 0.19
DDB1-215ENST00000539712 DNAJC21Q5F1R6 531 aaKnown RBP16.21■□□□□ 0.19
DDB1-215ENST00000539712 AARS2Q5JTZ9 985 aaKnown RBP16.21■□□□□ 0.19
DDB1-215ENST00000539712 PRICKLE2Q7Z3G6 844 aa16.21■□□□□ 0.19
DDB1-215ENST00000539712 CAND1Q86VP6 1230 aaKnown RBP16.21■□□□□ 0.19
DDB1-215ENST00000539712 REXO1L1PQ8IX06 675 aa16.21■□□□□ 0.19
DDB1-215ENST00000539712 DSELQ8IZU8 1212 aa16.21■□□□□ 0.19
DDB1-215ENST00000539712 MPP5Q8N3R9 675 aa16.21■□□□□ 0.19
DDB1-215ENST00000539712 LMNTD1Q8N9Z9 388 aa16.21■□□□□ 0.19
DDB1-215ENST00000539712 LINC01555Q8NAE3 123 aa16.21■□□□□ 0.19
DDB1-215ENST00000539712 ASZ1Q8WWH4 475 aa16.21■□□□□ 0.19
DDB1-215ENST00000539712 ABHD17AQ96GS6 310 aa16.21■□□□□ 0.19
DDB1-215ENST00000539712 CHRNA10Q9GZZ6 450 aa16.21■□□□□ 0.19
DDB1-215ENST00000539712 MRM3Q9HC36 420 aaKnown RBP16.21■□□□□ 0.19
DDB1-215ENST00000539712 PCMTD2Q9NV79 361 aa16.21■□□□□ 0.19
DDB1-215ENST00000539712 BFARQ9NZS9 450 aa16.21■□□□□ 0.19
DDB1-215ENST00000539712 TDRKHQ9Y2W6 561 aaKnown RBP16.21■□□□□ 0.19
DDB1-215ENST00000539712 JRKLQ9Y4A0 524 aa16.21■□□□□ 0.19
DDB1-215ENST00000539712 NBASA2RRP1 2371 aa16.21■□□□□ 0.19
DDB1-215ENST00000539712 CDC14CA4D256 554 aa16.2■□□□□ 0.18
DDB1-215ENST00000539712 K7EM74 188 aa16.2■□□□□ 0.18
DDB1-215ENST00000539712 VAPBO95292 243 aa16.2■□□□□ 0.18
DDB1-215ENST00000539712 IL10RAQ13651 578 aa16.2■□□□□ 0.18
DDB1-215ENST00000539712 CYP1B1Q16678 543 aa16.2■□□□□ 0.18
DDB1-215ENST00000539712 KYNUQ16719 465 aa16.2■□□□□ 0.18
DDB1-215ENST00000539712 CTSL3PQ5NE16 218 aa16.2■□□□□ 0.18
DDB1-215ENST00000539712 IZUMO3Q5VZ72 239 aa16.2■□□□□ 0.18
DDB1-215ENST00000539712 ZNF385CQ66K41 422 aaPredicted RBP16.2■□□□□ 0.18
DDB1-215ENST00000539712 PTRH1Q86Y79 214 aaKnown RBP16.2■□□□□ 0.18
DDB1-215ENST00000539712 MR1Q95460 341 aa16.2■□□□□ 0.18
DDB1-215ENST00000539712 BIRC8Q96P09 236 aa16.2■□□□□ 0.18
DDB1-215ENST00000539712 TRIM56Q9BRZ2 755 aaKnown RBP16.2■□□□□ 0.18
DDB1-215ENST00000539712 ZNF71Q9NQZ8 489 aaPredicted RBP16.2■□□□□ 0.18
DDB1-215ENST00000539712 SOX13Q9UN79 622 aa16.2■□□□□ 0.18
DDB1-215ENST00000539712 FARSAQ9Y285 508 aaKnown RBP16.2■□□□□ 0.18
DDB1-215ENST00000539712 GOLGA8KD6RF30 607 aa16.19■□□□□ 0.18
DDB1-215ENST00000539712 GOLGA8TH3BQL2 631 aa16.19■□□□□ 0.18
DDB1-215ENST00000539712 AP3B1O00203 1094 aa16.19■□□□□ 0.18
DDB1-215ENST00000539712 TMEM63AO94886 807 aa16.19■□□□□ 0.18
DDB1-215ENST00000539712 RPS3P23396 243 aaKnown RBP eCLIP16.19■□□□□ 0.183e-7■■■□□ 17.1
DDB1-215ENST00000539712 PKLRP30613 574 aa16.19■□□□□ 0.18
DDB1-215ENST00000539712 PPARGP37231 505 aaPredicted RBP16.19■□□□□ 0.18
DDB1-215ENST00000539712 VPS41P49754 854 aa16.19■□□□□ 0.18
DDB1-215ENST00000539712 GPS1Q13098 491 aa16.19■□□□□ 0.18
DDB1-215ENST00000539712 UGT8Q16880 541 aa16.19■□□□□ 0.18
DDB1-215ENST00000539712 TYSND1Q2T9J0 566 aa16.19■□□□□ 0.18
DDB1-215ENST00000539712 FAM69BQ5VUD6 431 aa16.19■□□□□ 0.18
DDB1-215ENST00000539712 FAM20CQ8IXL6 584 aa16.19■□□□□ 0.18
DDB1-215ENST00000539712 DNAJC22Q8N4W6 341 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms