RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 OR7A17O14581 309 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 ABCB7O75027 752 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 GPIP06744 558 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 PFKLP17858 780 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 GP2P55259 537 aaKnown RBP12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 DMPKQ09013 629 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 PTGR1Q14914 329 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 ATP6AP1LQ52LC2 224 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 CCDC92Q53HC0 331 aaPredicted RBP12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 COQ5Q5HYK3 327 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 HECTD3Q5T447 861 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 GTF2IRD2BQ6EKJ0 949 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 SLC16A12Q6ZSM3 486 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 GPRIN3Q6ZVF9 776 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 ANKS3Q6ZW76 656 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 TAS2R42Q7RTR8 314 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 GTF2IRD2Q86UP8 949 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 ZCCHC7Q8N3Z6 543 aaKnown RBP12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 OR6K2Q8NGY2 324 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 LKAAEAR1Q8TD35 194 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 CAPSLQ8WWF8 208 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 SLC22A12Q96S37 553 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 ELAC1Q9H777 363 aaKnown RBP12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 ATP13A3Q9H7F0 1226 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 CD320Q9NPF0 282 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 FAM32AQ9Y421 112 aaKnown RBP12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 PCDHB9Q9Y5E1 797 aa12.32□□□□□ -0.44
SFSWAP-208ENST00000539506 TBKBP1A7MCY6 615 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 STX7O15400 261 aaKnown RBP12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 JRKO75564 520 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 MLYCDO95822 493 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 GUCA1CO95843 209 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 FADS2O95864 444 aaKnown RBP12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 ALPLP05186 524 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 SELPP16109 830 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 MRPL19P49406 292 aaKnown RBP12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 TTPAP49638 278 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 CHRNB3Q05901 458 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 ADPRMQ3LIE5 342 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 C6orf141Q5SZD1 244 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 ADGRF1Q5T601 910 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 SBSNQ6UWP8 590 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 USP51Q70EK9 711 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 PTRH1Q86Y79 214 aaKnown RBP12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 FAM126BQ8IXS8 530 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 CHDHQ8NE62 594 aaPredicted RBP12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 KCNJ9Q92806 393 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 BHMTQ93088 406 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 ISG20Q96AZ6 181 aaKnown RBP12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 TRIM54Q9BYV2 358 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 STARD7Q9NQZ5 370 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 IL17CQ9P0M4 197 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 SNX5Q9Y5X3 404 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 SLC30A1Q9Y6M5 507 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 A0A1B0GVM2 712 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 FZD6O60353 706 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 VPS4BO75351 444 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 PRKD3O94806 890 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 EFEMP2O95967 443 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 BMP4P12644 408 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 ERVK-8P63133 956 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 SULT1C3Q6IMI6 304 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 LAIR2Q6ISS4 152 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 SLC8B1Q6J4K2 584 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 IL27RAQ6UWB1 636 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 DLEU7Q6UYE1 221 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 ADCK1Q86TW2 530 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 ANKRD46Q86W74 232 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 HEATR4Q86WZ0 1026 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 SLC22A15Q8IZD6 547 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 OR56A4Q8NGH8 313 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 RAB2BQ8WUD1 216 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 NUSAP1Q9BXS6 441 aaKnown RBP12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 CWH43Q9H720 699 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 ELOVL2Q9NXB9 296 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 ADGRE2Q9UHX3 823 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 CAB39Q9Y376 341 aaPredicted RBP12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 PRSS21Q9Y6M0 314 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 XIRP2A4UGR9 3374 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 UPK3BL1B0FP48 263 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 UPK3BL2E5RIL1 263 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 KPNA4O00629 521 aaPredicted RBP12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 PRSS23O95084 383 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 CAPN1P07384 714 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 COL6A1P12109 1028 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 GKP32189 559 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 ALDH3A2P51648 485 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 CLCN4P51793 760 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 TMBIM6P55061 237 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 FOXM1Q08050 763 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 TWF1Q12792 350 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 SYT16Q17RD7 645 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 RFTN2Q52LD8 501 aaPredicted RBP12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 GCNT7Q6ZNI0 430 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 OR7A2PQ8NGA2 310 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 FKBP10Q96AY3 582 aa12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 KLF16Q9BXK1 252 aaPredicted RBP12.31□□□□□ -0.44
SFSWAP-208ENST00000539506 ATAD3AQ9NVI7 634 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms