RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 ERVK-8P63133 956 aa14.28□□□□□ -0.12
CACNB1-206ENST00000539338 CDCA2Q69YH5 1023 aaPredicted RBP14.28□□□□□ -0.12
CACNB1-206ENST00000539338 TMEM220Q6QAJ8 160 aa14.28□□□□□ -0.12
CACNB1-206ENST00000539338 AKAP14Q86UN6 197 aa14.28□□□□□ -0.12
CACNB1-206ENST00000539338 NPLOC4Q8TAT6 608 aa14.28□□□□□ -0.12
CACNB1-206ENST00000539338 PYCR2Q96C36 320 aa14.28□□□□□ -0.12
CACNB1-206ENST00000539338 COX4I2Q96KJ9 171 aa14.28□□□□□ -0.12
CACNB1-206ENST00000539338 FCRL4Q96PJ5 515 aa14.28□□□□□ -0.12
CACNB1-206ENST00000539338 BRINP2Q9C0B6 783 aa14.28□□□□□ -0.12
CACNB1-206ENST00000539338 FAM53CQ9NYF3 392 aa14.28□□□□□ -0.12
CACNB1-206ENST00000539338 TOR1BO14657 336 aa14.28□□□□□ -0.12
CACNB1-206ENST00000539338 RAP2AP10114 183 aa14.28□□□□□ -0.12
CACNB1-206ENST00000539338 NSG1P42857 185 aa14.28□□□□□ -0.12
CACNB1-206ENST00000539338 CCR10P46092 362 aa14.28□□□□□ -0.12
CACNB1-206ENST00000539338 PSMD4P55036 377 aaKnown RBP14.28□□□□□ -0.12
CACNB1-206ENST00000539338 DCST1Q5T197 706 aa14.28□□□□□ -0.12
CACNB1-206ENST00000539338 ADGRG2Q8IZP9 1017 aa14.28□□□□□ -0.12
CACNB1-206ENST00000539338 SVOPLQ8N434 492 aa14.28□□□□□ -0.12
CACNB1-206ENST00000539338 PCDHGA4Q9Y5G9 962 aa14.28□□□□□ -0.12
CACNB1-206ENST00000539338 SCAMP1O15126 338 aa14.27□□□□□ -0.12
CACNB1-206ENST00000539338 RNASEH2AO75792 299 aaKnown RBP14.27□□□□□ -0.12
CACNB1-206ENST00000539338 PRNPP04156 253 aa14.27□□□□□ -0.12
CACNB1-206ENST00000539338 RHAGQ02094 409 aa14.27□□□□□ -0.12
CACNB1-206ENST00000539338 IKBIPQ70UQ0 350 aa14.27□□□□□ -0.12
CACNB1-206ENST00000539338 HMGB4Q8WW32 186 aa14.27□□□□□ -0.12
CACNB1-206ENST00000539338 TXNRD2Q9NNW7 524 aa14.27□□□□□ -0.12
CACNB1-206ENST00000539338 MCUBQ9NWR8 336 aa14.27□□□□□ -0.12
CACNB1-206ENST00000539338 PSAT1Q9Y617 370 aa14.27□□□□□ -0.12
CACNB1-206ENST00000539338 NRP1O14786 923 aa14.27□□□□□ -0.12
CACNB1-206ENST00000539338 PGRMC2O15173 223 aa14.27□□□□□ -0.12
CACNB1-206ENST00000539338 FOXD2O60548 495 aaPredicted RBP14.27□□□□□ -0.12
CACNB1-206ENST00000539338 TPST2O60704 377 aa14.27□□□□□ -0.12
CACNB1-206ENST00000539338 KHDRBS3O75525 346 aaKnown RBP14.27□□□□□ -0.12
CACNB1-206ENST00000539338 ALPIP09923 528 aa14.27□□□□□ -0.12
CACNB1-206ENST00000539338 CSKP41240 450 aa14.27□□□□□ -0.12
CACNB1-206ENST00000539338 SEC13P55735 322 aa14.27□□□□□ -0.12
CACNB1-206ENST00000539338 RFTN2Q52LD8 501 aaPredicted RBP14.27□□□□□ -0.12
CACNB1-206ENST00000539338 PTCRAQ6ISU1 281 aaPredicted RBP14.27□□□□□ -0.12
CACNB1-206ENST00000539338 C6orf89Q6UWU4 347 aa14.27□□□□□ -0.12
CACNB1-206ENST00000539338 KAT2AQ92830 837 aa14.27□□□□□ -0.12
CACNB1-206ENST00000539338 ASB9Q96DX5 294 aa14.27□□□□□ -0.12
CACNB1-206ENST00000539338 CDKN2AIPNLQ96HQ2 116 aa14.27□□□□□ -0.12
CACNB1-206ENST00000539338 OSBPL2Q9H1P3 480 aa14.27□□□□□ -0.12
CACNB1-206ENST00000539338 C11orf16Q9NQ32 467 aa14.27□□□□□ -0.12
CACNB1-206ENST00000539338 KLF11O14901 512 aa14.27□□□□□ -0.13
CACNB1-206ENST00000539338 AIREO43918 545 aa14.27□□□□□ -0.13
CACNB1-206ENST00000539338 SCN2BO60939 215 aa14.27□□□□□ -0.13
CACNB1-206ENST00000539338 PSIP1O75475 530 aaKnown RBP14.27□□□□□ -0.13
CACNB1-206ENST00000539338 ACVRL1P37023 503 aa14.27□□□□□ -0.13
CACNB1-206ENST00000539338 LRRC17Q8N6Y2 441 aa14.27□□□□□ -0.13
CACNB1-206ENST00000539338 BEND7Q8N7W2 519 aaPredicted RBP14.27□□□□□ -0.13
CACNB1-206ENST00000539338 KCTD13Q8WZ19 329 aa14.27□□□□□ -0.13
CACNB1-206ENST00000539338 FUBP3Q96I24 572 aaKnown RBP eCLIP14.27□□□□□ -0.13
CACNB1-206ENST00000539338 CCSER2Q9H7U1 834 aa14.27□□□□□ -0.13
CACNB1-206ENST00000539338 SLC25A12O75746 678 aa14.27□□□□□ -0.13
CACNB1-206ENST00000539338 SAGP10523 405 aaPredicted RBP14.27□□□□□ -0.13
CACNB1-206ENST00000539338 AZGP1P25311 298 aaKnown RBP14.27□□□□□ -0.13
CACNB1-206ENST00000539338 MERTKQ12866 999 aa14.27□□□□□ -0.13
CACNB1-206ENST00000539338 HERC3Q15034 1050 aa14.27□□□□□ -0.13
CACNB1-206ENST00000539338 MSANTD2Q6P1R3 559 aa14.27□□□□□ -0.13
CACNB1-206ENST00000539338 RNF19BQ6ZMZ0 732 aa14.27□□□□□ -0.13
CACNB1-206ENST00000539338 OR9I1Q8NGQ6 314 aa14.27□□□□□ -0.13
CACNB1-206ENST00000539338 LRRC58Q96CX6 371 aa14.27□□□□□ -0.13
CACNB1-206ENST00000539338 TOX2Q96NM4 488 aa14.27□□□□□ -0.13
CACNB1-206ENST00000539338 KIFC1Q9BW19 673 aa14.27□□□□□ -0.13
CACNB1-206ENST00000539338 LRRC3Q9BY71 257 aa14.27□□□□□ -0.13
CACNB1-206ENST00000539338 SLC2A4RGQ9NR83 387 aa14.27□□□□□ -0.13
CACNB1-206ENST00000539338 ABCB8Q9NUT2 735 aa14.27□□□□□ -0.13
CACNB1-206ENST00000539338 PTTG2Q9NZH5 202 aa14.27□□□□□ -0.13
CACNB1-206ENST00000539338 OAZ3Q9UMX2 235 aa14.27□□□□□ -0.13
CACNB1-206ENST00000539338 HS3ST4Q9Y661 456 aa14.27□□□□□ -0.13
CACNB1-206ENST00000539338 ADAMDEC1O15204 470 aa14.26□□□□□ -0.13
CACNB1-206ENST00000539338 TAS1R3Q7RTX0 852 aa14.26□□□□□ -0.13
CACNB1-206ENST00000539338 SIGLEC10Q96LC7 697 aa14.26□□□□□ -0.13
CACNB1-206ENST00000539338 HEPHQ9BQS7 1158 aa14.26□□□□□ -0.13
CACNB1-206ENST00000539338 K7EPI3 171 aa14.26□□□□□ -0.13
CACNB1-206ENST00000539338 PLK4O00444 970 aa14.26□□□□□ -0.13
CACNB1-206ENST00000539338 OR1F1O43749 312 aa14.26□□□□□ -0.13
CACNB1-206ENST00000539338 C8GP07360 202 aa14.26□□□□□ -0.13
CACNB1-206ENST00000539338 PSMA1P25786 263 aaKnown RBP14.26□□□□□ -0.13
CACNB1-206ENST00000539338 BMPR1AP36894 532 aa14.26□□□□□ -0.13
CACNB1-206ENST00000539338 HCAR3P49019 387 aa14.26□□□□□ -0.13
CACNB1-206ENST00000539338 MXD1Q05195 221 aa14.26□□□□□ -0.13
CACNB1-206ENST00000539338 PCLAFQ15004 111 aa14.26□□□□□ -0.13
CACNB1-206ENST00000539338 MBLAC2Q68D91 279 aa14.26□□□□□ -0.13
CACNB1-206ENST00000539338 GPR153Q6NV75 609 aa14.26□□□□□ -0.13
CACNB1-206ENST00000539338 FANCFQ9NPI8 374 aa14.26□□□□□ -0.13
CACNB1-206ENST00000539338 GALPQ9UBC7 116 aa14.26□□□□□ -0.13
CACNB1-206ENST00000539338 KCTD3Q9Y597 815 aa14.26□□□□□ -0.13
CACNB1-206ENST00000539338 IQCMA0A1B0GVH7 501 aa14.26□□□□□ -0.13
CACNB1-206ENST00000539338 SAP18O00422 153 aaKnown RBP14.26□□□□□ -0.13
CACNB1-206ENST00000539338 ARPC2O15144 300 aa14.26□□□□□ -0.13
CACNB1-206ENST00000539338 RASGRP1O95267 797 aa14.26□□□□□ -0.13
CACNB1-206ENST00000539338 MYBPC1Q00872 1141 aa14.26□□□□□ -0.13
CACNB1-206ENST00000539338 MPP2Q14168 576 aa14.26□□□□□ -0.13
CACNB1-206ENST00000539338 PIK3R6Q5UE93 754 aa14.26□□□□□ -0.13
CACNB1-206ENST00000539338 ZNF570Q96NI8 536 aa14.26□□□□□ -0.13
CACNB1-206ENST00000539338 DNAJB9Q9UBS3 223 aa14.26□□□□□ -0.13
CACNB1-206ENST00000539338 CHRM5P08912 532 aaPredicted RBP14.26□□□□□ -0.13
CACNB1-206ENST00000539338 MTTPP55157 894 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms