RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 ZKSCAN5Q9Y2L8 839 aa21.49■■□□□ 1.03
SCARB1-206ENST00000539320 TDRKHQ9Y2W6 561 aaKnown RBP21.49■■□□□ 1.03
SCARB1-206ENST00000539320 SETXQ7Z333 2677 aaKnown RBP21.49■■□□□ 1.03
SCARB1-206ENST00000539320 MEN1O00255 615 aa21.48■■□□□ 1.03
SCARB1-206ENST00000539320 CHRM5P08912 532 aaPredicted RBP21.48■■□□□ 1.03
SCARB1-206ENST00000539320 CASRP41180 1078 aa21.48■■□□□ 1.03
SCARB1-206ENST00000539320 CSE1LP55060 971 aaKnown RBP21.48■■□□□ 1.03
SCARB1-206ENST00000539320 ITGA1P56199 1179 aa21.48■■□□□ 1.03
SCARB1-206ENST00000539320 SESN2P58004 480 aaPredicted RBP21.48■■□□□ 1.03
SCARB1-206ENST00000539320 BASP1P80723 227 aaKnown RBP21.48■■□□□ 1.03
SCARB1-206ENST00000539320 IZUMO3Q5VZ72 239 aa21.48■■□□□ 1.03
SCARB1-206ENST00000539320 CDHR3Q6ZTQ4 885 aa21.48■■□□□ 1.03
SCARB1-206ENST00000539320 APLFQ8IW19 511 aaPredicted RBP21.48■■□□□ 1.03
SCARB1-206ENST00000539320 LKAAEAR1Q8TD35 194 aa21.48■■□□□ 1.03
SCARB1-206ENST00000539320 THAP4Q8WY91 577 aa21.48■■□□□ 1.03
SCARB1-206ENST00000539320 CATSPERZQ9NTU4 200 aa21.48■■□□□ 1.03
SCARB1-206ENST00000539320 PCMTD2Q9NV79 361 aa21.48■■□□□ 1.03
SCARB1-206ENST00000539320 OR6C2Q9NZP2 312 aa21.48■■□□□ 1.03
SCARB1-206ENST00000539320 E7EQ34 232 aa21.47■■□□□ 1.03
SCARB1-206ENST00000539320 KDM1AO60341 852 aa21.47■■□□□ 1.03
SCARB1-206ENST00000539320 FGGP02679 453 aa21.47■■□□□ 1.03
SCARB1-206ENST00000539320 RAB40ALP0C0E4 278 aa21.47■■□□□ 1.03
SCARB1-206ENST00000539320 NR1D1P20393 614 aa21.47■■□□□ 1.03
SCARB1-206ENST00000539320 DNAJC21Q5F1R6 531 aaKnown RBP21.47■■□□□ 1.03
SCARB1-206ENST00000539320 PCID2Q5JVF3 399 aa21.47■■□□□ 1.03
SCARB1-206ENST00000539320 TCTN3Q6NUS6 607 aa21.47■■□□□ 1.03
SCARB1-206ENST00000539320 FAM198BQ6UWH4 519 aa21.47■■□□□ 1.03
SCARB1-206ENST00000539320 C4orf22Q6V702 233 aa21.47■■□□□ 1.03
SCARB1-206ENST00000539320 SYTL1Q8IYJ3 562 aa21.47■■□□□ 1.03
SCARB1-206ENST00000539320 SLC22A15Q8IZD6 547 aa21.47■■□□□ 1.03
SCARB1-206ENST00000539320 ENDOVQ8N8Q3 282 aaKnown RBP21.47■■□□□ 1.03
SCARB1-206ENST00000539320 TRIM58Q8NG06 486 aa21.47■■□□□ 1.03
SCARB1-206ENST00000539320 AP1M1Q9BXS5 423 aa21.47■■□□□ 1.03
SCARB1-206ENST00000539320 SLC7A5P2Q9GIP4 190 aa21.47■■□□□ 1.03
SCARB1-206ENST00000539320 SERTAD3Q9UJW9 196 aa21.47■■□□□ 1.03
SCARB1-206ENST00000539320 ANAPC5Q9UJX4 755 aa21.47■■□□□ 1.03
SCARB1-206ENST00000539320 PLAGL1Q9UM63 463 aa21.47■■□□□ 1.03
SCARB1-206ENST00000539320 DRG1Q9Y295 367 aaKnown RBP21.47■■□□□ 1.03
SCARB1-206ENST00000539320 SNRNP200O75643 2136 aaKnown RBP21.46■■□□□ 1.03
SCARB1-206ENST00000539320 A0A0J9YY10 115 aa21.46■■□□□ 1.03
SCARB1-206ENST00000539320 CCR7P32248 378 aa21.46■■□□□ 1.03
SCARB1-206ENST00000539320 LCN10Q6JVE6 187 aa21.46■■□□□ 1.03
SCARB1-206ENST00000539320 GSTA5Q7RTV2 222 aa21.46■■□□□ 1.03
SCARB1-206ENST00000539320 N4BP2L2Q92802 583 aaPredicted RBP21.46■■□□□ 1.03
SCARB1-206ENST00000539320 OR2A14Q96R47 310 aa21.46■■□□□ 1.03
SCARB1-206ENST00000539320 CARD6Q9BX69 1037 aa21.46■■□□□ 1.03
SCARB1-206ENST00000539320 IL22Q9GZX6 179 aa21.46■■□□□ 1.03
SCARB1-206ENST00000539320 CHRAC1Q9NRG0 131 aa21.46■■□□□ 1.03
SCARB1-206ENST00000539320 SPHK1Q9NYA1 384 aa21.46■■□□□ 1.03
SCARB1-206ENST00000539320 MARCH4Q9P2E8 410 aaPredicted RBP21.46■■□□□ 1.03
SCARB1-206ENST00000539320 TLK1Q9UKI8 766 aa21.46■■□□□ 1.03
SCARB1-206ENST00000539320 SNX7Q9UNH6 387 aa21.46■■□□□ 1.03
SCARB1-206ENST00000539320 PRMT5O14744 637 aaPredicted RBP21.45■■□□□ 1.02
SCARB1-206ENST00000539320 DNAJB5O75953 348 aa21.45■■□□□ 1.02
SCARB1-206ENST00000539320 APOA4P06727 396 aa21.45■■□□□ 1.02
SCARB1-206ENST00000539320 TPBGLP0DKB5 382 aa21.45■■□□□ 1.02
SCARB1-206ENST00000539320 PKLRP30613 574 aa21.45■■□□□ 1.02
SCARB1-206ENST00000539320 TTPAP49638 278 aa21.45■■□□□ 1.02
SCARB1-206ENST00000539320 CRADDP78560 199 aa21.45■■□□□ 1.02
SCARB1-206ENST00000539320 HSPA14Q0VDF9 509 aa21.45■■□□□ 1.02
SCARB1-206ENST00000539320 KLRB1Q12918 225 aa21.45■■□□□ 1.02
SCARB1-206ENST00000539320 TMED2Q15363 201 aa21.45■■□□□ 1.02
SCARB1-206ENST00000539320 DEFB110Q30KQ9 67 aa21.45■■□□□ 1.02
SCARB1-206ENST00000539320 PTCHD3Q3KNS1 767 aa21.45■■□□□ 1.02
SCARB1-206ENST00000539320 CPZQ66K79 652 aa21.45■■□□□ 1.02
SCARB1-206ENST00000539320 LDB1Q86U70 411 aaPredicted RBP21.45■■□□□ 1.02
SCARB1-206ENST00000539320 VRK3Q8IV63 474 aa21.45■■□□□ 1.02
SCARB1-206ENST00000539320 GPR135Q8IZ08 494 aa21.45■■□□□ 1.02
SCARB1-206ENST00000539320 FLVCR1-AS1Q8TAF5 88 aa21.45■■□□□ 1.02
SCARB1-206ENST00000539320 ASZ1Q8WWH4 475 aa21.45■■□□□ 1.02
SCARB1-206ENST00000539320 TCTN2Q96GX1 697 aa21.45■■□□□ 1.02
SCARB1-206ENST00000539320 NLNQ9BYT8 704 aa21.45■■□□□ 1.02
SCARB1-206ENST00000539320 TRIM55Q9BYV6 548 aa21.45■■□□□ 1.02
SCARB1-206ENST00000539320 CHRNA10Q9GZZ6 450 aa21.45■■□□□ 1.02
SCARB1-206ENST00000539320 FAM60AQ9NP50 221 aa21.45■■□□□ 1.02
SCARB1-206ENST00000539320 TREX1Q9NSU2 369 aa21.45■■□□□ 1.02
SCARB1-206ENST00000539320 BFARQ9NZS9 450 aa21.45■■□□□ 1.02
SCARB1-206ENST00000539320 PTPN13Q12923 2485 aa21.44■■□□□ 1.02
SCARB1-206ENST00000539320 IQCF5A8MTL0 148 aa21.44■■□□□ 1.02
SCARB1-206ENST00000539320 K7EM74 188 aa21.44■■□□□ 1.02
SCARB1-206ENST00000539320 AP3B1O00203 1094 aa21.44■■□□□ 1.02
SCARB1-206ENST00000539320 ZNF749O43361 778 aa21.44■■□□□ 1.02
SCARB1-206ENST00000539320 CEP104O60308 925 aa21.44■■□□□ 1.02
SCARB1-206ENST00000539320 GPC4O75487 556 aa21.44■■□□□ 1.02
SCARB1-206ENST00000539320 RPN2P04844 631 aa21.44■■□□□ 1.02
SCARB1-206ENST00000539320 HBQ1P09105 142 aa21.44■■□□□ 1.02
SCARB1-206ENST00000539320 PEBP1P30086 187 aaKnown RBP21.44■■□□□ 1.02
SCARB1-206ENST00000539320 RAB28P51157 221 aa21.44■■□□□ 1.02
SCARB1-206ENST00000539320 ZIC1Q15915 447 aa21.44■■□□□ 1.02
SCARB1-206ENST00000539320 SLC5A12Q1EHB4 618 aa21.44■■□□□ 1.02
SCARB1-206ENST00000539320 DCUN1D3Q8IWE4 304 aa21.44■■□□□ 1.02
SCARB1-206ENST00000539320 MPP5Q8N3R9 675 aa21.44■■□□□ 1.02
SCARB1-206ENST00000539320 CDYLQ9Y232 598 aa21.44■■□□□ 1.02
SCARB1-206ENST00000539320 FER1L5A0AVI2 2057 aa21.44■■□□□ 1.02
SCARB1-206ENST00000539320 MED13Q9UHV7 2174 aa21.44■■□□□ 1.02
SCARB1-206ENST00000539320 ARGFXA6NJG6 315 aa21.43■■□□□ 1.02
SCARB1-206ENST00000539320 ISM1B1AKI9 464 aa21.43■■□□□ 1.02
SCARB1-206ENST00000539320 C9J4A7 227 aa21.43■■□□□ 1.02
SCARB1-206ENST00000539320 CD3EAPO15446 510 aaKnown RBP21.43■■□□□ 1.02
SCARB1-206ENST00000539320 CAPN1P07384 714 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms