RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 OR51F1A6NGY5 319 aa12.09□□□□□ -0.47
VAMP1-206ENST00000538970 C9J4A7 227 aa12.09□□□□□ -0.47
VAMP1-206ENST00000538970 QSOX1O00391 747 aa12.09□□□□□ -0.47
VAMP1-206ENST00000538970 HCRTR1O43613 425 aa12.09□□□□□ -0.47
VAMP1-206ENST00000538970 FTH1P02794 183 aa12.09□□□□□ -0.47
VAMP1-206ENST00000538970 PTMAP06454 111 aaKnown RBP12.09□□□□□ -0.47
VAMP1-206ENST00000538970 HBQ1P09105 142 aa12.09□□□□□ -0.47
VAMP1-206ENST00000538970 TPBGLP0DKB5 382 aa12.09□□□□□ -0.47
VAMP1-206ENST00000538970 MSNP26038 577 aaKnown RBP12.09□□□□□ -0.47
VAMP1-206ENST00000538970 ACADLP28330 430 aa12.09□□□□□ -0.47
VAMP1-206ENST00000538970 FOXN2P32314 431 aa12.09□□□□□ -0.47
VAMP1-206ENST00000538970 GABRA4P48169 554 aa12.09□□□□□ -0.47
VAMP1-206ENST00000538970 RRADP55042 308 aa12.09□□□□□ -0.47
VAMP1-206ENST00000538970 ATP1A4Q13733 1029 aa12.09□□□□□ -0.47
VAMP1-206ENST00000538970 ZIC1Q15915 447 aa12.09□□□□□ -0.47
VAMP1-206ENST00000538970 DEFB110Q30KQ9 67 aa12.09□□□□□ -0.47
VAMP1-206ENST00000538970 UNC5AQ6ZN44 842 aa12.09□□□□□ -0.47
VAMP1-206ENST00000538970 PEX26Q7Z412 305 aa12.09□□□□□ -0.47
VAMP1-206ENST00000538970 RAB43Q86YS6 212 aa12.09□□□□□ -0.47
VAMP1-206ENST00000538970 TBC1D21Q8IYX1 336 aa12.09□□□□□ -0.47
VAMP1-206ENST00000538970 GPR135Q8IZ08 494 aa12.09□□□□□ -0.47
VAMP1-206ENST00000538970 TAB3Q8N5C8 712 aaPredicted RBP12.09□□□□□ -0.47
VAMP1-206ENST00000538970 UBL4BQ8N7F7 174 aa12.09□□□□□ -0.47
VAMP1-206ENST00000538970 TMEM102Q8N9M5 508 aaPredicted RBP12.09□□□□□ -0.47
VAMP1-206ENST00000538970 Q8NA96 180 aa12.09□□□□□ -0.47
VAMP1-206ENST00000538970 GLIS1Q8NBF1 620 aa12.09□□□□□ -0.47
VAMP1-206ENST00000538970 FLVCR1-AS1Q8TAF5 88 aa12.09□□□□□ -0.47
VAMP1-206ENST00000538970 ELMO1Q92556 727 aa12.09□□□□□ -0.47
VAMP1-206ENST00000538970 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.09□□□□□ -0.47
VAMP1-206ENST00000538970 TCTN2Q96GX1 697 aa12.09□□□□□ -0.47
VAMP1-206ENST00000538970 OR2A14Q96R47 310 aa12.09□□□□□ -0.47
VAMP1-206ENST00000538970 TMEM121Q9BTD3 319 aa12.09□□□□□ -0.47
VAMP1-206ENST00000538970 DHRS4Q9BTZ2 278 aa12.09□□□□□ -0.47
VAMP1-206ENST00000538970 CHRNA10Q9GZZ6 450 aa12.09□□□□□ -0.47
VAMP1-206ENST00000538970 SPHK1Q9NYA1 384 aa12.09□□□□□ -0.47
VAMP1-206ENST00000538970 AMFRQ9UKV5 643 aa12.09□□□□□ -0.47
VAMP1-206ENST00000538970 ASF1AQ9Y294 204 aa12.09□□□□□ -0.47
VAMP1-206ENST00000538970 PADI2Q9Y2J8 665 aa12.09□□□□□ -0.47
VAMP1-206ENST00000538970 A0A0J9YY10 115 aa12.08□□□□□ -0.48
VAMP1-206ENST00000538970 TCRBV7S2A1N4TA0A589 114 aa12.08□□□□□ -0.48
VAMP1-206ENST00000538970 SLC5A10A0PJK1 596 aa12.08□□□□□ -0.48
VAMP1-206ENST00000538970 CCDC162PA2VCL2 907 aa12.08□□□□□ -0.48
VAMP1-206ENST00000538970 MIF4GDA9UHW6 222 aaKnown RBP12.08□□□□□ -0.48
VAMP1-206ENST00000538970 BHMG1C9JSJ3 638 aaPredicted RBP12.08□□□□□ -0.48
VAMP1-206ENST00000538970 ZNF185O15231 689 aa12.08□□□□□ -0.48
VAMP1-206ENST00000538970 PSMD3O43242 534 aa12.08□□□□□ -0.48
VAMP1-206ENST00000538970 DPM1O60762 260 aa12.08□□□□□ -0.48
VAMP1-206ENST00000538970 KLF7O75840 302 aaPredicted RBP12.08□□□□□ -0.48
VAMP1-206ENST00000538970 OR2B3O76000 313 aa12.08□□□□□ -0.48
VAMP1-206ENST00000538970 CHRM5P08912 532 aaPredicted RBP12.08□□□□□ -0.48
VAMP1-206ENST00000538970 CBSLP0DN79 551 aa12.08□□□□□ -0.48
VAMP1-206ENST00000538970 AGXTP21549 392 aa12.08□□□□□ -0.48
VAMP1-206ENST00000538970 CBSP35520 551 aa12.08□□□□□ -0.48
VAMP1-206ENST00000538970 BRD3Q15059 726 aa12.08□□□□□ -0.48
VAMP1-206ENST00000538970 SYTL3Q4VX76 610 aa12.08□□□□□ -0.48
VAMP1-206ENST00000538970 CCDC38Q502W7 563 aa12.08□□□□□ -0.48
VAMP1-206ENST00000538970 PRR30Q53SZ7 412 aaPredicted RBP12.08□□□□□ -0.48
VAMP1-206ENST00000538970 ZNF787Q6DD87 383 aa12.08□□□□□ -0.48
VAMP1-206ENST00000538970 RHBDD2Q6NTF9 364 aa12.08□□□□□ -0.48
VAMP1-206ENST00000538970 JMJD6Q6NYC1 403 aaPredicted RBP12.08□□□□□ -0.48
VAMP1-206ENST00000538970 NAPRTQ6XQN6 538 aa12.08□□□□□ -0.48
VAMP1-206ENST00000538970 MRGPREQ86SM8 312 aa12.08□□□□□ -0.48
VAMP1-206ENST00000538970 LINC00523Q86TU6 105 aa12.08□□□□□ -0.48
VAMP1-206ENST00000538970 HOOK3Q86VS8 718 aa12.08□□□□□ -0.48
VAMP1-206ENST00000538970 HPS6Q86YV9 775 aa12.08□□□□□ -0.48
VAMP1-206ENST00000538970 OR52K1Q8NGK4 314 aa12.08□□□□□ -0.48
VAMP1-206ENST00000538970 OR13J1Q8NGT2 312 aa12.08□□□□□ -0.48
VAMP1-206ENST00000538970 OR5K2Q8NHB8 316 aa12.08□□□□□ -0.48
VAMP1-206ENST00000538970 N4BP2L2Q92802 583 aaPredicted RBP12.08□□□□□ -0.48
VAMP1-206ENST00000538970 GBP5Q96PP8 586 aa12.08□□□□□ -0.48
VAMP1-206ENST00000538970 ALS2CR12Q96Q35 445 aa12.08□□□□□ -0.48
VAMP1-206ENST00000538970 C17orf62Q9BQA9 187 aa12.08□□□□□ -0.48
VAMP1-206ENST00000538970 GPR83Q9NYM4 423 aa12.08□□□□□ -0.48
VAMP1-206ENST00000538970 OR6C2Q9NZP2 312 aa12.08□□□□□ -0.48
VAMP1-206ENST00000538970 LUZP4Q9P127 313 aa12.08□□□□□ -0.48
VAMP1-206ENST00000538970 POLG2Q9UHN1 485 aa12.08□□□□□ -0.48
VAMP1-206ENST00000538970 G3BP2Q9UN86 482 aaKnown RBP12.08□□□□□ -0.48
VAMP1-206ENST00000538970 AP1M2Q9Y6Q5 423 aa12.08□□□□□ -0.48
VAMP1-206ENST00000538970 A1L4Q6 167 aa12.07□□□□□ -0.48
VAMP1-206ENST00000538970 A6NL46 340 aa12.07□□□□□ -0.48
VAMP1-206ENST00000538970 ZSCAN9O15535 394 aaPredicted RBP12.07□□□□□ -0.48
VAMP1-206ENST00000538970 FTCDO95954 541 aa12.07□□□□□ -0.48
VAMP1-206ENST00000538970 CTSBP07858 339 aa12.07□□□□□ -0.48
VAMP1-206ENST00000538970 OR56A5P0C7T3 313 aa12.07□□□□□ -0.48
VAMP1-206ENST00000538970 PEBP1P30086 187 aaKnown RBP12.07□□□□□ -0.48
VAMP1-206ENST00000538970 OTX2P32243 289 aa12.07□□□□□ -0.48
VAMP1-206ENST00000538970 PLOD1Q02809 727 aaPredicted RBP12.07□□□□□ -0.48
VAMP1-206ENST00000538970 CDH17Q12864 832 aa12.07□□□□□ -0.48
VAMP1-206ENST00000538970 INPP5JQ15735 1006 aaPredicted RBP12.07□□□□□ -0.48
VAMP1-206ENST00000538970 FHL5Q5TD97 284 aa12.07□□□□□ -0.48
VAMP1-206ENST00000538970 C1orf189Q5VU69 101 aa12.07□□□□□ -0.48
VAMP1-206ENST00000538970 SLC6A19Q695T7 634 aa12.07□□□□□ -0.48
VAMP1-206ENST00000538970 KIAA1328Q86T90 577 aa12.07□□□□□ -0.48
VAMP1-206ENST00000538970 SYCE1Q8N0S2 351 aa12.07□□□□□ -0.48
VAMP1-206ENST00000538970 RBMXL3Q8N7X1 1067 aaKnown RBP12.07□□□□□ -0.48
VAMP1-206ENST00000538970 PROKR1Q8TCW9 393 aa12.07□□□□□ -0.48
VAMP1-206ENST00000538970 ATG4AQ8WYN0 398 aa12.07□□□□□ -0.48
VAMP1-206ENST00000538970 SMAD5Q99717 465 aaKnown RBP12.07□□□□□ -0.48
VAMP1-206ENST00000538970 MFRPQ9BY79 579 aa12.07□□□□□ -0.48
VAMP1-206ENST00000538970 SPRTNQ9H040 489 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms