RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 ERGP11308 486 aa13.29□□□□□ -0.28
CD9-208ENST00000538834 ITGB6P18564 788 aa13.29□□□□□ -0.28
CD9-208ENST00000538834 PRDX3P30048 256 aaKnown RBP13.29□□□□□ -0.28
CD9-208ENST00000538834 PEBP1P30086 187 aaKnown RBP13.29□□□□□ -0.28
CD9-208ENST00000538834 GABRA4P48169 554 aa13.29□□□□□ -0.28
CD9-208ENST00000538834 MAPK10P53779 464 aa13.29□□□□□ -0.28
CD9-208ENST00000538834 MRPS25P82663 173 aaKnown RBP13.29□□□□□ -0.28
CD9-208ENST00000538834 PRKG2Q13237 762 aa13.29□□□□□ -0.28
CD9-208ENST00000538834 IL11RAQ14626 422 aa13.29□□□□□ -0.28
CD9-208ENST00000538834 FASTKD3Q14CZ7 662 aaKnown RBP13.29□□□□□ -0.28
CD9-208ENST00000538834 BBS9Q3SYG4 887 aa13.29□□□□□ -0.28
CD9-208ENST00000538834 SNAP47Q5SQN1 464 aa13.29□□□□□ -0.28
CD9-208ENST00000538834 ANKS6Q68DC2 871 aa13.29□□□□□ -0.28
CD9-208ENST00000538834 TRMT10BQ6PF06 316 aaKnown RBP13.29□□□□□ -0.28
CD9-208ENST00000538834 FOXR1Q6PIV2 292 aa13.29□□□□□ -0.28
CD9-208ENST00000538834 CNSTQ6PJW8 725 aa13.29□□□□□ -0.28
CD9-208ENST00000538834 ZDHHC24Q6UX98 284 aa13.29□□□□□ -0.28
CD9-208ENST00000538834 FAM92BQ6ZTR7 304 aa13.29□□□□□ -0.28
CD9-208ENST00000538834 LINC01555Q8NAE3 123 aa13.29□□□□□ -0.28
CD9-208ENST00000538834 HMGCLL1Q8TB92 370 aa13.29□□□□□ -0.28
CD9-208ENST00000538834 LCN9Q8WX39 176 aa13.29□□□□□ -0.28
CD9-208ENST00000538834 PPM1MQ96MI6 270 aa13.29□□□□□ -0.28
CD9-208ENST00000538834 FCRL4Q96PJ5 515 aa13.29□□□□□ -0.28
CD9-208ENST00000538834 OR2A14Q96R47 310 aa13.29□□□□□ -0.28
CD9-208ENST00000538834 FAM167BQ9BTA0 163 aa13.29□□□□□ -0.28
CD9-208ENST00000538834 AARSD1Q9BTE6 412 aaKnown RBP13.29□□□□□ -0.28
CD9-208ENST00000538834 TRIT1Q9H3H1 467 aaKnown RBP13.29□□□□□ -0.28
CD9-208ENST00000538834 SRMSQ9H3Y6 488 aa13.29□□□□□ -0.28
CD9-208ENST00000538834 FBXO6Q9NRD1 293 aaPredicted RBP13.29□□□□□ -0.28
CD9-208ENST00000538834 ENAMQ9NRM1 1142 aa13.29□□□□□ -0.28
CD9-208ENST00000538834 SLC39A1Q9NY26 324 aa13.29□□□□□ -0.28
CD9-208ENST00000538834 OR6C2Q9NZP2 312 aa13.29□□□□□ -0.28
CD9-208ENST00000538834 DHRS7Q9Y394 339 aa13.29□□□□□ -0.28
CD9-208ENST00000538834 MRFAP1Q9Y605 127 aa13.29□□□□□ -0.28
CD9-208ENST00000538834 H3BMH7 237 aa13.28□□□□□ -0.28
CD9-208ENST00000538834 GFYI3L273 518 aa13.28□□□□□ -0.28
CD9-208ENST00000538834 RRP8O43159 456 aaKnown RBP13.28□□□□□ -0.28
CD9-208ENST00000538834 PSIP1O75475 530 aaKnown RBP13.28□□□□□ -0.28
CD9-208ENST00000538834 C1orf105O95561 183 aa13.28□□□□□ -0.28
CD9-208ENST00000538834 F7P08709 466 aaPredicted RBP13.28□□□□□ -0.28
CD9-208ENST00000538834 ERVK-10P10266 1014 aa13.28□□□□□ -0.28
CD9-208ENST00000538834 POLR2CP19387 275 aaPredicted RBP13.28□□□□□ -0.28
CD9-208ENST00000538834 PKLRP30613 574 aa13.28□□□□□ -0.28
CD9-208ENST00000538834 SHMT2P34897 504 aa13.28□□□□□ -0.28
CD9-208ENST00000538834 ARL4CP56559 192 aa13.28□□□□□ -0.28
CD9-208ENST00000538834 SH3BP2P78314 561 aa13.28□□□□□ -0.28
CD9-208ENST00000538834 MPP1Q00013 466 aa13.28□□□□□ -0.28
CD9-208ENST00000538834 GUCY2DQ02846 1103 aa13.28□□□□□ -0.28
CD9-208ENST00000538834 THOC5Q13769 683 aaKnown RBP13.28□□□□□ -0.28
CD9-208ENST00000538834 TUBB2AQ13885 445 aa13.28□□□□□ -0.28
CD9-208ENST00000538834 MAP7Q14244 749 aa13.28□□□□□ -0.28
CD9-208ENST00000538834 PLCL1Q15111 1095 aa13.28□□□□□ -0.28
CD9-208ENST00000538834 TRADDQ15628 312 aa13.28□□□□□ -0.28
CD9-208ENST00000538834 WHAMMP3Q1A5X7 153 aa13.28□□□□□ -0.28
CD9-208ENST00000538834 SYTL3Q4VX76 610 aa13.28□□□□□ -0.28
CD9-208ENST00000538834 DCAF12Q5T6F0 453 aa13.28□□□□□ -0.28
CD9-208ENST00000538834 TMEM164Q5U3C3 297 aa13.28□□□□□ -0.28
CD9-208ENST00000538834 IRGCQ6NXR0 463 aa13.28□□□□□ -0.28
CD9-208ENST00000538834 CEACAM20Q6UY09 585 aa13.28□□□□□ -0.28
CD9-208ENST00000538834 OTOAQ7RTW8 1153 aa13.28□□□□□ -0.28
CD9-208ENST00000538834 TIPARPQ7Z3E1 657 aaKnown RBP13.28□□□□□ -0.28
CD9-208ENST00000538834 BPHLQ86WA6 291 aaPredicted RBP13.28□□□□□ -0.28
CD9-208ENST00000538834 ZFAND4Q86XD8 727 aa13.28□□□□□ -0.28
CD9-208ENST00000538834 DCUN1D3Q8IWE4 304 aa13.28□□□□□ -0.28
CD9-208ENST00000538834 MMGT1Q8N4V1 131 aa13.28□□□□□ -0.28
CD9-208ENST00000538834 FBXO15Q8NCQ5 510 aaPredicted RBP13.28□□□□□ -0.28
CD9-208ENST00000538834 CD200R1Q8TD46 325 aa13.28□□□□□ -0.28
CD9-208ENST00000538834 DENND1AQ8TEH3 1009 aa13.28□□□□□ -0.28
CD9-208ENST00000538834 KCNE4Q8WWG9 221 aa13.28□□□□□ -0.28
CD9-208ENST00000538834 NKD1Q969G9 470 aa13.28□□□□□ -0.28
CD9-208ENST00000538834 HGH1Q9BTY7 390 aa13.28□□□□□ -0.28
CD9-208ENST00000538834 TUBB2BQ9BVA1 445 aa13.28□□□□□ -0.28
CD9-208ENST00000538834 TRIM31Q9BZY9 425 aa13.28□□□□□ -0.28
CD9-208ENST00000538834 IARS2Q9NSE4 1012 aaKnown RBP13.28□□□□□ -0.28
CD9-208ENST00000538834 KLHL3Q9UH77 587 aa13.28□□□□□ -0.28
CD9-208ENST00000538834 NFS1Q9Y697 457 aa13.28□□□□□ -0.28
CD9-208ENST00000538834 MED13Q9UHV7 2174 aa13.28□□□□□ -0.28
CD9-208ENST00000538834 EIF3FO00303 357 aaPredicted RBP13.27□□□□□ -0.29
CD9-208ENST00000538834 TERTO14746 1132 aaKnown RBP13.27□□□□□ -0.29
CD9-208ENST00000538834 ZBTB11O95625 1053 aaPredicted RBP13.27□□□□□ -0.29
CD9-208ENST00000538834 CHRM5P08912 532 aaPredicted RBP13.27□□□□□ -0.29
CD9-208ENST00000538834 FOLR1P15328 257 aa13.27□□□□□ -0.29
CD9-208ENST00000538834 RAB28P51157 221 aa13.27□□□□□ -0.29
CD9-208ENST00000538834 HSD11B2P80365 405 aa13.27□□□□□ -0.29
CD9-208ENST00000538834 ABRQ12979 859 aa13.27□□□□□ -0.29
CD9-208ENST00000538834 TMED2Q15363 201 aa13.27□□□□□ -0.29
CD9-208ENST00000538834 TGIF1Q15583 401 aa13.27□□□□□ -0.29
CD9-208ENST00000538834 COL28A1Q2UY09 1125 aa13.27□□□□□ -0.29
CD9-208ENST00000538834 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.27□□□□□ -0.29
CD9-208ENST00000538834 ACSBG2Q5FVE4 666 aa13.27□□□□□ -0.29
CD9-208ENST00000538834 DNTTIP2Q5QJE6 756 aaKnown RBP13.27□□□□□ -0.29
CD9-208ENST00000538834 SPNS2Q8IVW8 549 aa13.27□□□□□ -0.29
CD9-208ENST00000538834 ZBTB2Q8N680 514 aa13.27□□□□□ -0.29
CD9-208ENST00000538834 ZNF501Q96CX3 271 aaPredicted RBP13.27□□□□□ -0.29
CD9-208ENST00000538834 CRELD1Q96HD1 420 aa13.27□□□□□ -0.29
CD9-208ENST00000538834 TRAPPC9Q96Q05 1148 aa13.27□□□□□ -0.29
CD9-208ENST00000538834 XKR8Q9H6D3 395 aa13.27□□□□□ -0.29
CD9-208ENST00000538834 ZDHHC18Q9NUE0 388 aa13.27□□□□□ -0.29
CD9-208ENST00000538834 SPHK1Q9NYA1 384 aa13.27□□□□□ -0.29
CD9-208ENST00000538834 ACTR10Q9NZ32 417 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms