RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 LRRN3E7EW58 273 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 LRCH4O75427 683 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 GNAO1P09471 354 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 SLC35G4P0C7Q5 338 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 NCK1P16333 377 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 PDHA2P29803 388 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 SLC1A2P43004 574 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 TSPAN5P62079 268 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 TAF1AQ15573 450 aaPredicted RBP6.8□□□□□ -1.32
SORT1-209ENST00000538502 ASTE1Q2TB18 679 aaPredicted RBP6.8□□□□□ -1.32
SORT1-209ENST00000538502 C9orf64Q5T6V5 341 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 FAM46CQ5VWP2 391 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 UTS2BQ765I0 119 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 IQCF2Q8IXL9 164 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 SLC43A3Q8NBI5 491 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 BPIFB1Q8TDL5 484 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 PIGKQ92643 395 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 COL26A1Q96A83 441 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 TSSK3Q96PN8 268 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 LRRN3Q9H3W5 708 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 ZNHIT2Q9UHR6 403 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 MFSD11O43934 449 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 CILPO75339 1184 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 RENP00797 406 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 GKN3PP0CG01 181 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 L1CAMP32004 1257 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 ADRA1BP35368 520 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 PFKPQ01813 784 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 SFT2D3Q587I9 215 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 PPM1JQ5JR12 505 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 CLEC6AQ6EIG7 209 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 MON1AQ86VX9 555 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 GLIS3Q8NEA6 775 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 OR2L5Q8NG80 312 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 GTPBP3Q969Y2 492 aaKnown RBP6.8□□□□□ -1.32
SORT1-209ENST00000538502 HYLS1Q96M11 299 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 ZSWIM3Q96MP5 696 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 CDT1Q9H211 546 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 RPF2Q9H7B2 306 aaKnown RBP6.8□□□□□ -1.32
SORT1-209ENST00000538502 KIAA1522Q9P206 1035 aaPredicted RBP6.8□□□□□ -1.32
SORT1-209ENST00000538502 A0A1B0GVM2 712 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 TCAF2A6NFQ2 919 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 hCG_2039718K7EN88 272 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 HTRA2O43464 458 aaPredicted RBP6.8□□□□□ -1.32
SORT1-209ENST00000538502 SLC25A14O95258 325 aaPredicted RBP6.8□□□□□ -1.32
SORT1-209ENST00000538502 COL6A1P12109 1028 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 ARF4P18085 180 aaPredicted RBP6.8□□□□□ -1.32
SORT1-209ENST00000538502 CYP2B6P20813 491 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 SSR2P43308 183 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 PSEN2P49810 448 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 SCARB2Q14108 478 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 TSTQ16762 297 aaKnown RBP6.8□□□□□ -1.32
SORT1-209ENST00000538502 ABCA11PQ4W5N1 156 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 ARSHQ5FYA8 562 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 FAM171A1Q5VUB5 890 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 PNCKQ6P2M8 343 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 ARRDC4Q8NCT1 418 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 ZNF563Q8TA94 476 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 JOSD2Q8TAC2 188 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 SMG7Q92540 1137 aaKnown RBP6.8□□□□□ -1.32
SORT1-209ENST00000538502 AHCYL2Q96HN2 611 aaKnown RBP6.8□□□□□ -1.32
SORT1-209ENST00000538502 SLC35G5Q96KT7 338 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 HSPA12BQ96MM6 686 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 TCEAL7Q9BRU2 100 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 POLR2J3Q9H1A7 115 aaKnown RBP6.8□□□□□ -1.32
SORT1-209ENST00000538502 SPON1Q9HCB6 807 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 PCDHGA11Q9Y5H2 935 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 RIC1Q4ADV7 1423 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 CXCL11O14625 94 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 MEIS2O14770 477 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 SCAMP3O14828 347 aaKnown RBP6.8□□□□□ -1.32
SORT1-209ENST00000538502 TP73O15350 636 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 KAT7O95251 611 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 ZNF182P17025 639 aaPredicted RBP6.8□□□□□ -1.32
SORT1-209ENST00000538502 KLRC2P26717 231 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 GRK5P34947 590 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 IGFALSP35858 605 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 PGDP52209 483 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 CRISP3P54108 245 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 LY6KQ17RY6 165 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 ANKRD22Q5VYY1 191 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 RAET1GQ6H3X3 334 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 DOK6Q6PKX4 331 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 HACD2Q6Y1H2 254 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 C16orf59Q7L2K0 433 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 MARCH9Q86YJ5 346 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 OR10H4Q8NGA5 316 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 NEK7Q8TDX7 302 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 MAFIPQ8WZ33 124 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 CXorf40BQ96DE9 158 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 ZBED6CLQ96FA7 236 aaPredicted RBP6.8□□□□□ -1.32
SORT1-209ENST00000538502 SLC45A3Q96JT2 553 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 BTBD1Q9H0C5 482 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 ZNF304Q9HCX3 659 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 MRPL17Q9NRX2 175 aaKnown RBP6.8□□□□□ -1.32
SORT1-209ENST00000538502 LYARQ9NX58 379 aaKnown RBP6.8□□□□□ -1.32
SORT1-209ENST00000538502 TBC1D14Q9P2M4 693 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 HCN2Q9UL51 889 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 FZD10Q9ULW2 581 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms