RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 BOP1Q14137 746 aaKnown RBP24.34■■□□□ 1.49
RAB40C-204ENST00000538492 CYBRD1Q53TN4 286 aa24.34■■□□□ 1.49
RAB40C-204ENST00000538492 BORAQ6PGQ7 559 aa24.34■■□□□ 1.49
RAB40C-204ENST00000538492 VRK3Q8IV63 474 aa24.34■■□□□ 1.49
RAB40C-204ENST00000538492 FAM86B1Q8N7N1 296 aa24.34■■□□□ 1.49
RAB40C-204ENST00000538492 BDH2Q9BUT1 245 aa24.34■■□□□ 1.49
RAB40C-204ENST00000538492 ACPTQ9BZG2 426 aa24.34■■□□□ 1.49
RAB40C-204ENST00000538492 BRD9Q9H8M2 597 aa24.34■■□□□ 1.49
RAB40C-204ENST00000538492 SLC25A37Q9NYZ2 338 aa24.34■■□□□ 1.49
RAB40C-204ENST00000538492 B4GALT6Q9UBX8 382 aa24.34■■□□□ 1.49
RAB40C-204ENST00000538492 A0A1B0GVG6 124 aa24.34■■□□□ 1.49
RAB40C-204ENST00000538492 CCL16O15467 120 aa24.34■■□□□ 1.49
RAB40C-204ENST00000538492 WDR47O94967 919 aa24.34■■□□□ 1.49
RAB40C-204ENST00000538492 PDYNP01213 254 aa24.34■■□□□ 1.49
RAB40C-204ENST00000538492 CSF2RAP15509 400 aa24.34■■□□□ 1.49
RAB40C-204ENST00000538492 CCR2P41597 374 aa24.34■■□□□ 1.49
RAB40C-204ENST00000538492 ALDH3B2P48448 385 aa24.34■■□□□ 1.49
RAB40C-204ENST00000538492 WDR5P61964 334 aaKnown RBP24.34■■□□□ 1.49
RAB40C-204ENST00000538492 GTDC1Q4AE62 458 aa24.34■■□□□ 1.49
RAB40C-204ENST00000538492 DHRSXQ8N5I4 330 aa24.34■■□□□ 1.49
RAB40C-204ENST00000538492 USP7Q93009 1102 aa24.34■■□□□ 1.49
RAB40C-204ENST00000538492 TBCDQ9BTW9 1192 aa24.34■■□□□ 1.49
RAB40C-204ENST00000538492 SLC32A1Q9H598 525 aa24.34■■□□□ 1.49
RAB40C-204ENST00000538492 C1orf109Q9NX04 203 aa24.34■■□□□ 1.49
RAB40C-204ENST00000538492 TMPRSS11EQ9UL52 423 aa24.34■■□□□ 1.49
RAB40C-204ENST00000538492 NEDD8-MDP1E9PL57 170 aa24.33■■□□□ 1.49
RAB40C-204ENST00000538492 CBSLP0DN79 551 aa24.33■■□□□ 1.49
RAB40C-204ENST00000538492 BCKDHAP12694 445 aa24.33■■□□□ 1.49
RAB40C-204ENST00000538492 ITGB8P26012 769 aa24.33■■□□□ 1.49
RAB40C-204ENST00000538492 SLC5A2P31639 672 aa24.33■■□□□ 1.49
RAB40C-204ENST00000538492 CBSP35520 551 aa24.33■■□□□ 1.49
RAB40C-204ENST00000538492 OR52E6Q96RD3 313 aa24.33■■□□□ 1.49
RAB40C-204ENST00000538492 MCCC1Q96RQ3 725 aaPredicted RBP24.33■■□□□ 1.49
RAB40C-204ENST00000538492 ZBP1Q9H171 429 aa24.33■■□□□ 1.49
RAB40C-204ENST00000538492 NTN4Q9HB63 628 aa24.33■■□□□ 1.49
RAB40C-204ENST00000538492 GSTA4O15217 222 aa24.33■■□□□ 1.48
RAB40C-204ENST00000538492 GMNNO75496 209 aa24.33■■□□□ 1.48
RAB40C-204ENST00000538492 OR56A5P0C7T3 313 aa24.33■■□□□ 1.48
RAB40C-204ENST00000538492 CYP4F3Q08477 520 aa24.33■■□□□ 1.48
RAB40C-204ENST00000538492 RBBP5Q15291 538 aaKnown RBP24.33■■□□□ 1.48
RAB40C-204ENST00000538492 MSRB3Q8IXL7 192 aa24.33■■□□□ 1.48
RAB40C-204ENST00000538492 FBXO30Q8TB52 745 aa24.33■■□□□ 1.48
RAB40C-204ENST00000538492 CLMPQ9H6B4 373 aa24.33■■□□□ 1.48
RAB40C-204ENST00000538492 CARS2Q9HA77 564 aaKnown RBP24.33■■□□□ 1.48
RAB40C-204ENST00000538492 SLC25A13Q9UJS0 675 aa24.33■■□□□ 1.48
RAB40C-204ENST00000538492 MAGED1Q9Y5V3 778 aaPredicted RBP24.33■■□□□ 1.48
RAB40C-204ENST00000538492 ACRP10323 421 aa24.32■■□□□ 1.48
RAB40C-204ENST00000538492 CAPGP40121 348 aa24.32■■□□□ 1.48
RAB40C-204ENST00000538492 PTPN5P54829 565 aa24.32■■□□□ 1.48
RAB40C-204ENST00000538492 USP39Q53GS9 565 aaKnown RBP24.32■■□□□ 1.48
RAB40C-204ENST00000538492 CARD16Q5EG05 197 aa24.32■■□□□ 1.48
RAB40C-204ENST00000538492 SLC6A13Q9NSD5 602 aa24.32■■□□□ 1.48
RAB40C-204ENST00000538492 MAFFQ9ULX9 164 aa24.32■■□□□ 1.48
RAB40C-204ENST00000538492 DLGAP4Q9Y2H0 992 aa24.32■■□□□ 1.48
RAB40C-204ENST00000538492 KRT6AP02538 564 aa24.32■■□□□ 1.48
RAB40C-204ENST00000538492 KRT6BP04259 564 aa24.32■■□□□ 1.48
RAB40C-204ENST00000538492 IL6P05231 212 aa24.32■■□□□ 1.48
RAB40C-204ENST00000538492 AOAHP28039 575 aa24.32■■□□□ 1.48
RAB40C-204ENST00000538492 KRT6CP48668 564 aa24.32■■□□□ 1.48
RAB40C-204ENST00000538492 SH3BGRP55822 239 aaPredicted RBP24.32■■□□□ 1.48
RAB40C-204ENST00000538492 TUBA4AP68366 448 aa24.32■■□□□ 1.48
RAB40C-204ENST00000538492 KCTD21Q4G0X4 260 aa24.32■■□□□ 1.48
RAB40C-204ENST00000538492 FAM98BQ52LJ0 330 aaKnown RBP24.32■■□□□ 1.48
RAB40C-204ENST00000538492 ENPP6Q6UWR7 440 aa24.32■■□□□ 1.48
RAB40C-204ENST00000538492 SERPINA13PQ6UXR4 307 aa24.32■■□□□ 1.48
RAB40C-204ENST00000538492 PHACTR4Q8IZ21 702 aa24.32■■□□□ 1.48
RAB40C-204ENST00000538492 SELENOMQ8WWX9 145 aa24.32■■□□□ 1.48
RAB40C-204ENST00000538492 PPIL1Q9Y3C6 166 aa24.32■■□□□ 1.48
RAB40C-204ENST00000538492 TULP3O75386 442 aa24.31■■□□□ 1.48
RAB40C-204ENST00000538492 POP4O95707 220 aaKnown RBP24.31■■□□□ 1.48
RAB40C-204ENST00000538492 RAP2AP10114 183 aa24.31■■□□□ 1.48
RAB40C-204ENST00000538492 C7P10643 843 aa24.31■■□□□ 1.48
RAB40C-204ENST00000538492 SPINT3P49223 89 aa24.31■■□□□ 1.48
RAB40C-204ENST00000538492 PLCL1Q15111 1095 aa24.31■■□□□ 1.48
RAB40C-204ENST00000538492 ZIK1Q3SY52 487 aaPredicted RBP24.31■■□□□ 1.48
RAB40C-204ENST00000538492 ELMOD1Q8N336 334 aa24.31■■□□□ 1.48
RAB40C-204ENST00000538492 GLB1L3Q8NCI6 653 aaPredicted RBP24.31■■□□□ 1.48
RAB40C-204ENST00000538492 TNIP2Q8NFZ5 429 aa24.31■■□□□ 1.48
RAB40C-204ENST00000538492 C8orf4Q9NR00 106 aa24.31■■□□□ 1.48
RAB40C-204ENST00000538492 ASAH2Q9NR71 780 aa24.31■■□□□ 1.48
RAB40C-204ENST00000538492 FAM8A1Q9UBU6 413 aa24.31■■□□□ 1.48
RAB40C-204ENST00000538492 ZNF639Q9UID6 485 aa24.31■■□□□ 1.48
RAB40C-204ENST00000538492 LTBP2Q14767 1821 aa24.31■■□□□ 1.48
RAB40C-204ENST00000538492 AREL1O15033 823 aa24.31■■□□□ 1.48
RAB40C-204ENST00000538492 GRM6O15303 877 aa24.31■■□□□ 1.48
RAB40C-204ENST00000538492 CTSAP10619 480 aa24.31■■□□□ 1.48
RAB40C-204ENST00000538492 HTRA3P83110 453 aa24.31■■□□□ 1.48
RAB40C-204ENST00000538492 CHRNB3Q05901 458 aa24.31■■□□□ 1.48
RAB40C-204ENST00000538492 SMU1Q2TAY7 513 aa24.31■■□□□ 1.48
RAB40C-204ENST00000538492 METTL2BQ6P1Q9 378 aaKnown RBP24.31■■□□□ 1.48
RAB40C-204ENST00000538492 KREMEN2Q8NCW0 462 aa24.31■■□□□ 1.48
RAB40C-204ENST00000538492 ZNF548Q8NEK5 533 aaPredicted RBP24.31■■□□□ 1.48
RAB40C-204ENST00000538492 SCAMP4Q969E2 229 aa24.31■■□□□ 1.48
RAB40C-204ENST00000538492 TMBIM1Q969X1 311 aa24.31■■□□□ 1.48
RAB40C-204ENST00000538492 PARVBQ9HBI1 364 aa24.31■■□□□ 1.48
RAB40C-204ENST00000538492 THEGQ9P2T0 379 aa24.31■■□□□ 1.48
RAB40C-204ENST00000538492 RSL24D1Q9UHA3 163 aaKnown RBP24.31■■□□□ 1.48
RAB40C-204ENST00000538492 PPM1AP35813 382 aa24.3■■□□□ 1.48
RAB40C-204ENST00000538492 PTCHD3Q3KNS1 767 aa24.3■■□□□ 1.48
RAB40C-204ENST00000538492 TCEAL4Q96EI5 215 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms