RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 ITIH1P19827 911 aa12.7□□□□□ -0.38
CHFR-216ENST00000538235 SAT1P21673 171 aa12.7□□□□□ -0.38
CHFR-216ENST00000538235 CD9P21926 228 aa12.7□□□□□ -0.38
CHFR-216ENST00000538235 PSMB5P28074 263 aa12.7□□□□□ -0.38
CHFR-216ENST00000538235 SHC2P98077 582 aa12.7□□□□□ -0.38
CHFR-216ENST00000538235 FASTKQ14296 549 aaKnown RBP12.7□□□□□ -0.38
CHFR-216ENST00000538235 TMED2Q15363 201 aa12.7□□□□□ -0.38
CHFR-216ENST00000538235 UNC5DQ6UXZ4 953 aa12.7□□□□□ -0.38
CHFR-216ENST00000538235 ERMP1Q7Z2K6 904 aa12.7□□□□□ -0.38
CHFR-216ENST00000538235 TRIM73Q86UV7 250 aa12.7□□□□□ -0.38
CHFR-216ENST00000538235 TAX1BP1Q86VP1 789 aa12.7□□□□□ -0.38
CHFR-216ENST00000538235 TMPRSS12Q86WS5 348 aa12.7□□□□□ -0.38
CHFR-216ENST00000538235 TBC1D21Q8IYX1 336 aa12.7□□□□□ -0.38
CHFR-216ENST00000538235 SPATA6LQ8N4H0 392 aa12.7□□□□□ -0.38
CHFR-216ENST00000538235 C2orf73Q8N5S3 287 aaPredicted RBP12.7□□□□□ -0.38
CHFR-216ENST00000538235 OR4E2Q8NGC2 313 aa12.7□□□□□ -0.38
CHFR-216ENST00000538235 NCSTNQ92542 709 aa12.7□□□□□ -0.38
CHFR-216ENST00000538235 INPP5DQ92835 1189 aa12.7□□□□□ -0.38
CHFR-216ENST00000538235 LINGO1Q96FE5 620 aa12.7□□□□□ -0.38
CHFR-216ENST00000538235 CPNE1Q99829 537 aa12.7□□□□□ -0.38
CHFR-216ENST00000538235 MVB12BQ9H7P6 319 aa12.7□□□□□ -0.38
CHFR-216ENST00000538235 SYNPO2LQ9H987 977 aa12.7□□□□□ -0.38
CHFR-216ENST00000538235 CTNNAL1Q9UBT7 734 aa12.7□□□□□ -0.38
CHFR-216ENST00000538235 TRMT6Q9UJA5 497 aaKnown RBP12.7□□□□□ -0.38
CHFR-216ENST00000538235 TDRKHQ9Y2W6 561 aaKnown RBP12.7□□□□□ -0.38
CHFR-216ENST00000538235 VWA7Q9Y334 891 aa12.7□□□□□ -0.38
CHFR-216ENST00000538235 COMMD10Q9Y6G5 202 aa12.7□□□□□ -0.38
CHFR-216ENST00000538235 MAP1BP46821 2468 aaKnown RBP12.7□□□□□ -0.38
CHFR-216ENST00000538235 A8MU76 341 aa12.69□□□□□ -0.38
CHFR-216ENST00000538235 CDC7O00311 574 aa12.69□□□□□ -0.38
CHFR-216ENST00000538235 IFRD1O00458 451 aaPredicted RBP12.69□□□□□ -0.38
CHFR-216ENST00000538235 CAPN5O15484 640 aaPredicted RBP12.69□□□□□ -0.38
CHFR-216ENST00000538235 HCRTR1O43613 425 aa12.69□□□□□ -0.38
CHFR-216ENST00000538235 DUX1O43812 170 aa12.69□□□□□ -0.38
CHFR-216ENST00000538235 PRICKLE3O43900 615 aaPredicted RBP12.69□□□□□ -0.38
CHFR-216ENST00000538235 SPAG6O75602 509 aa12.69□□□□□ -0.38
CHFR-216ENST00000538235 TCEA3O75764 348 aa12.69□□□□□ -0.38
CHFR-216ENST00000538235 ITGA2BP08514 1039 aa12.69□□□□□ -0.38
CHFR-216ENST00000538235 ABHD2P08910 425 aa12.69□□□□□ -0.38
CHFR-216ENST00000538235 MPC1LP0DKB6 136 aa12.69□□□□□ -0.38
CHFR-216ENST00000538235 ERGP11308 486 aa12.69□□□□□ -0.38
CHFR-216ENST00000538235 CCL4P13236 92 aa12.69□□□□□ -0.38
CHFR-216ENST00000538235 PVRP15151 417 aa12.69□□□□□ -0.38
CHFR-216ENST00000538235 POLR2CP19387 275 aaPredicted RBP12.69□□□□□ -0.38
CHFR-216ENST00000538235 CCKBRP32239 447 aa12.69□□□□□ -0.38
CHFR-216ENST00000538235 PMS2P54278 862 aa12.69□□□□□ -0.38
CHFR-216ENST00000538235 GPLD1P80108 840 aa12.69□□□□□ -0.38
CHFR-216ENST00000538235 IRF9Q00978 393 aa12.69□□□□□ -0.38
CHFR-216ENST00000538235 COL9A2Q14055 689 aaPredicted RBP12.69□□□□□ -0.38
CHFR-216ENST00000538235 PLCL1Q15111 1095 aa12.69□□□□□ -0.38
CHFR-216ENST00000538235 SNAP47Q5SQN1 464 aa12.69□□□□□ -0.38
CHFR-216ENST00000538235 SBSNQ6UWP8 590 aa12.69□□□□□ -0.38
CHFR-216ENST00000538235 FAM92BQ6ZTR7 304 aa12.69□□□□□ -0.38
CHFR-216ENST00000538235 ARHGAP22Q7Z5H3 698 aa12.69□□□□□ -0.38
CHFR-216ENST00000538235 DCUN1D3Q8IWE4 304 aa12.69□□□□□ -0.38
CHFR-216ENST00000538235 LRRC56Q8IYG6 542 aaPredicted RBP12.69□□□□□ -0.38
CHFR-216ENST00000538235 BMPERQ8N8U9 685 aa12.69□□□□□ -0.38
CHFR-216ENST00000538235 OR10G6Q8NH81 332 aa12.69□□□□□ -0.38
CHFR-216ENST00000538235 SLC44A1Q8WWI5 657 aa12.69□□□□□ -0.38
CHFR-216ENST00000538235 ASB11Q8WXH4 323 aa12.69□□□□□ -0.38
CHFR-216ENST00000538235 TGM7Q96PF1 710 aa12.69□□□□□ -0.38
CHFR-216ENST00000538235 PAFAH2Q99487 392 aa12.69□□□□□ -0.38
CHFR-216ENST00000538235 PKP4Q99569 1192 aa12.69□□□□□ -0.38
CHFR-216ENST00000538235 TSSK1BQ9BXA7 367 aa12.69□□□□□ -0.38
CHFR-216ENST00000538235 CCDC68Q9H2F9 335 aa12.69□□□□□ -0.38
CHFR-216ENST00000538235 TRIT1Q9H3H1 467 aaKnown RBP12.69□□□□□ -0.38
CHFR-216ENST00000538235 TFB2MQ9H5Q4 396 aaKnown RBP12.69□□□□□ -0.38
CHFR-216ENST00000538235 SIDT1Q9NXL6 827 aaKnown RBP12.69□□□□□ -0.38
CHFR-216ENST00000538235 EURLQ9NYK6 297 aa12.69□□□□□ -0.38
CHFR-216ENST00000538235 KLHL42Q9P2K6 505 aa12.69□□□□□ -0.38
CHFR-216ENST00000538235 SLC39A10Q9ULF5 831 aa12.69□□□□□ -0.38
CHFR-216ENST00000538235 CORO1CQ9ULV4 474 aaPredicted RBP12.69□□□□□ -0.38
CHFR-216ENST00000538235 NEUROG3Q9Y4Z2 214 aa12.69□□□□□ -0.38
CHFR-216ENST00000538235 APC2O95996 2303 aa12.69□□□□□ -0.38
CHFR-216ENST00000538235 IGHV5-51A0A0C4DH38 117 aa12.68□□□□□ -0.38
CHFR-216ENST00000538235 NPEPPSL1A6NEC2 478 aa12.68□□□□□ -0.38
CHFR-216ENST00000538235 C1QTNF9BB2RNN3 333 aa12.68□□□□□ -0.38
CHFR-216ENST00000538235 GFYI3L273 518 aa12.68□□□□□ -0.38
CHFR-216ENST00000538235 MYO1CO00159 1063 aa12.68□□□□□ -0.38
CHFR-216ENST00000538235 PFDN6O15212 129 aa12.68□□□□□ -0.38
CHFR-216ENST00000538235 ALDOAP04075 364 aaKnown RBP12.68□□□□□ -0.38
CHFR-216ENST00000538235 MPOP05164 745 aa12.68□□□□□ -0.38
CHFR-216ENST00000538235 CTSBP07858 339 aa12.68□□□□□ -0.38
CHFR-216ENST00000538235 C1QTNF9P0C862 333 aa12.68□□□□□ -0.38
CHFR-216ENST00000538235 SLC35E2BP0CK96 405 aa12.68□□□□□ -0.38
CHFR-216ENST00000538235 MAGEA12P43365 314 aa12.68□□□□□ -0.38
CHFR-216ENST00000538235 INHBCP55103 352 aa12.68□□□□□ -0.38
CHFR-216ENST00000538235 BIRC2Q13490 618 aa12.68□□□□□ -0.38
CHFR-216ENST00000538235 SLC29A2Q14542 456 aa12.68□□□□□ -0.38
CHFR-216ENST00000538235 ZIC1Q15915 447 aa12.68□□□□□ -0.38
CHFR-216ENST00000538235 PPP1R3AQ16821 1122 aa12.68□□□□□ -0.38
CHFR-216ENST00000538235 C3orf38Q5JPI3 329 aa12.68□□□□□ -0.38
CHFR-216ENST00000538235 WDR93Q6P2C0 686 aa12.68□□□□□ -0.38
CHFR-216ENST00000538235 TMEM71Q6P5X7 295 aa12.68□□□□□ -0.38
CHFR-216ENST00000538235 WDR74Q6RFH5 385 aaPredicted RBP12.68□□□□□ -0.38
CHFR-216ENST00000538235 NEK10Q6ZWH5 1172 aa12.68□□□□□ -0.38
CHFR-216ENST00000538235 RBM12BQ8IXT5 1001 aaKnown RBP12.68□□□□□ -0.38
CHFR-216ENST00000538235 CENPLQ8N0S6 344 aaPredicted RBP12.68□□□□□ -0.38
CHFR-216ENST00000538235 CACTIN-AS1Q8N1I8 211 aa12.68□□□□□ -0.38
CHFR-216ENST00000538235 EIF1ADQ8N9N8 165 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms