RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 E9PBE3 544 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 NDUFS4O43181 175 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 KLHL41O60662 606 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 NR1D1P20393 614 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 CCR4P51679 360 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 SEC24CP53992 1094 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 PPP1CAP62136 330 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 HMGCS1Q01581 520 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 SEMA3AQ14563 771 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 INAVAQ3KP66 663 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 FAM199XQ6PEV8 388 aaPredicted RBP7.06□□□□□ -1.28
MSH6-209ENST00000538136 ARCQ7LC44 396 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 CCDC74AQ96AQ1 378 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 APOLD1Q96LR9 279 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 TUBGCP5Q96RT8 1024 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 FRMD8P1Q9BZ68 369 aaPredicted RBP7.06□□□□□ -1.28
MSH6-209ENST00000538136 NOL11Q9H8H0 719 aaKnown RBP7.06□□□□□ -1.28
MSH6-209ENST00000538136 MRPS30Q9NP92 439 aaKnown RBP7.06□□□□□ -1.28
MSH6-209ENST00000538136 SLC17A7Q9P2U7 560 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 GIMAP2Q9UG22 337 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 GPN3Q9UHW5 284 aaPredicted RBP7.06□□□□□ -1.28
MSH6-209ENST00000538136 PCDHB3Q9Y5E6 796 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 OR51B4Q9Y5P0 310 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 TLN2Q9Y4G6 2542 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 MGAT4DA6NG13 374 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 KLK10O43240 276 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 PRKNO60260 465 aaPredicted RBP7.06□□□□□ -1.28
MSH6-209ENST00000538136 STC1P52823 247 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 PTPN5P54829 565 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 ALDH18A1P54886 795 aaKnown RBP7.06□□□□□ -1.28
MSH6-209ENST00000538136 STARD6P59095 220 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 IFT88Q13099 833 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 STX3Q13277 289 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 IHHQ14623 411 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 CYP2A13Q16696 494 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 ANKS6Q68DC2 871 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 HIBCHQ6NVY1 386 aaPredicted RBP7.06□□□□□ -1.28
MSH6-209ENST00000538136 CERS6Q6ZMG9 384 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 TMEM174Q8WUU8 243 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 PITPNM3Q9BZ71 974 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 EHD3Q9NZN3 535 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 HCN3Q9P1Z3 774 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 PACSIN3Q9UKS6 424 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 GRID1Q9ULK0 1009 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 TCP11X1B4DZS4 312 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 OR2B3O76000 313 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 NUDT14O95848 222 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 LINC00032P0C843 101 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 TPBGLP0DKB5 382 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 STX1BP61266 288 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 SH3BP2P78314 561 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 GPR18Q14330 331 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 KHDRBS2Q5VWX1 349 aaKnown RBP7.06□□□□□ -1.28
MSH6-209ENST00000538136 SLC9B2Q86UD5 537 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 VASH2Q86V25 355 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 RASGEF1CQ8N431 466 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 ARFGAP2Q8N6H7 521 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 AVL9Q8NBF6 648 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 STAG3L4Q8TBR4 150 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 SPOCK2Q92563 424 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 INSM2Q96T92 566 aaPredicted RBP7.06□□□□□ -1.28
MSH6-209ENST00000538136 DUSP15Q9H1R2 295 aaPredicted RBP7.06□□□□□ -1.28
MSH6-209ENST00000538136 EXO5Q9H790 373 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 WDR41Q9HAD4 459 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 MIEF1Q9NQG6 463 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 CCDC177Q9NQR7 707 aaPredicted RBP7.06□□□□□ -1.28
MSH6-209ENST00000538136 ANKRD10Q9NXR5 420 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 GRHL1Q9NZI5 618 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 TMEM216Q9P0N5 145 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 SCN3AQ9NY46 2000 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 JMJD1CQ15652 2540 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 PRR5-ARHGAP8B1AHC4 643 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 OR10H2O60403 315 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 NME6O75414 186 aaPredicted RBP7.05□□□□□ -1.28
MSH6-209ENST00000538136 KLK3P07288 261 aaPredicted RBP7.05□□□□□ -1.28
MSH6-209ENST00000538136 LTA4HP09960 611 aaKnown RBP7.05□□□□□ -1.28
MSH6-209ENST00000538136 CDH1P12830 882 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 VARSP26640 1264 aaKnown RBP7.05□□□□□ -1.28
MSH6-209ENST00000538136 CCR7P32248 378 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 GRK6P43250 576 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 HADHBP55084 474 aaKnown RBP7.05□□□□□ -1.28
MSH6-209ENST00000538136 CDKN2DP55273 166 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 SLC13A2Q13183 592 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 GLIPR1L2Q4G1C9 344 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 ARHGAP40Q5TG30 622 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 TRMT10CQ7L0Y3 403 aaKnown RBP7.05□□□□□ -1.28
MSH6-209ENST00000538136 AMIGO1Q86WK6 493 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 CRLF3Q8IUI8 442 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 CILP2Q8IUL8 1156 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 ARL14Q8N4G2 192 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 IFI44Q8TCB0 444 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 SLC30A3Q99726 388 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 CPNE1Q99829 537 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 IPPKQ9H8X2 491 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 C5AR2Q9P296 337 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 EFCAB7A8K855 629 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 TMEM150CB9EJG8 249 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 DUX1O43812 170 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 STK16O75716 305 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 MYCLP1P12525 358 aaPredicted RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms