RNA–Protein interactions for RNA: ENST00000537315.5

RFC5-208, Transcript of replication factor C subunit 5, human

TSL 4

Gene RFC5, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFC5-208	ENST00000537315	CDYL	Q9Y232	598 aa		11.65	□□□□□ -0.54
RFC5-208	ENST00000537315	FLNC	Q14315	2725 aa		11.64	□□□□□ -0.55
RFC5-208	ENST00000537315	PIPSL	A2A3N6	862 aa		11.64	□□□□□ -0.55
RFC5-208	ENST00000537315	CDC14C	A4D256	554 aa		11.64	□□□□□ -0.55
RFC5-208	ENST00000537315		B8ZZF3	427 aa		11.64	□□□□□ -0.55
RFC5-208	ENST00000537315	GOLGA8M	H3BSY2	632 aa		11.64	□□□□□ -0.55
RFC5-208	ENST00000537315	PGRMC1	O00264	195 aa	Known RBP	11.64	□□□□□ -0.55
RFC5-208	ENST00000537315	SLC28A2	O43868	658 aa		11.64	□□□□□ -0.55
RFC5-208	ENST00000537315	CPNE3	O75131	537 aa	Known RBP	11.64	□□□□□ -0.55
RFC5-208	ENST00000537315	VAPB	O95292	243 aa		11.64	□□□□□ -0.55
RFC5-208	ENST00000537315	KRT14	P02533	472 aa		11.64	□□□□□ -0.55
RFC5-208	ENST00000537315	CHRM5	P08912	532 aa	Predicted RBP	11.64	□□□□□ -0.55
RFC5-208	ENST00000537315	SHMT2	P34897	504 aa		11.64	□□□□□ -0.55
RFC5-208	ENST00000537315	BDKRB1	P46663	353 aa		11.64	□□□□□ -0.55
RFC5-208	ENST00000537315	EIF3B	P55884	814 aa	Known RBP	11.64	□□□□□ -0.55
RFC5-208	ENST00000537315	KCNAB2	Q13303	367 aa		11.64	□□□□□ -0.55
RFC5-208	ENST00000537315	ERV3-1	Q14264	604 aa		11.64	□□□□□ -0.55
RFC5-208	ENST00000537315	CTSL3P	Q5NE16	218 aa		11.64	□□□□□ -0.55
RFC5-208	ENST00000537315	FAM69B	Q5VUD6	431 aa		11.64	□□□□□ -0.55
RFC5-208	ENST00000537315	PTRHD1	Q6GMV3	140 aa	Known RBP	11.64	□□□□□ -0.55
RFC5-208	ENST00000537315	LRRC8B	Q6P9F7	803 aa		11.64	□□□□□ -0.55
RFC5-208	ENST00000537315	C4orf22	Q6V702	233 aa		11.64	□□□□□ -0.55
RFC5-208	ENST00000537315	UNC5A	Q6ZN44	842 aa		11.64	□□□□□ -0.55
RFC5-208	ENST00000537315	CDHR3	Q6ZTQ4	885 aa		11.64	□□□□□ -0.55
RFC5-208	ENST00000537315	SPNS2	Q8IVW8	549 aa		11.64	□□□□□ -0.55
RFC5-208	ENST00000537315	REXO1L1P	Q8IX06	675 aa		11.64	□□□□□ -0.55
RFC5-208	ENST00000537315	FAM20C	Q8IXL6	584 aa		11.64	□□□□□ -0.55
RFC5-208	ENST00000537315	TBC1D21	Q8IYX1	336 aa		11.64	□□□□□ -0.55
RFC5-208	ENST00000537315	SLC22A15	Q8IZD6	547 aa		11.64	□□□□□ -0.55
RFC5-208	ENST00000537315	SLC38A9	Q8NBW4	561 aa		11.64	□□□□□ -0.55
RFC5-208	ENST00000537315	OR5K2	Q8NHB8	316 aa		11.64	□□□□□ -0.55
RFC5-208	ENST00000537315	CFAP61	Q8NHU2	1237 aa		11.64	□□□□□ -0.55
RFC5-208	ENST00000537315	MAGOHB	Q96A72	148 aa	Known RBP	11.64	□□□□□ -0.55
RFC5-208	ENST00000537315	FAM136A	Q96C01	138 aa		11.64	□□□□□ -0.55
RFC5-208	ENST00000537315	IL17F	Q96PD4	163 aa		11.64	□□□□□ -0.55
RFC5-208	ENST00000537315	TRAPPC9	Q96Q05	1148 aa		11.64	□□□□□ -0.55
RFC5-208	ENST00000537315	P2RY12	Q9H244	342 aa		11.64	□□□□□ -0.55
RFC5-208	ENST00000537315	ACTL8	Q9H568	366 aa		11.64	□□□□□ -0.55
RFC5-208	ENST00000537315	STARD5	Q9NSY2	213 aa		11.64	□□□□□ -0.55
RFC5-208	ENST00000537315	TRMT1	Q9NXH9	659 aa	Known RBP	11.64	□□□□□ -0.55
RFC5-208	ENST00000537315	SOX13	Q9UN79	622 aa		11.64	□□□□□ -0.55
RFC5-208	ENST00000537315	JRKL	Q9Y4A0	524 aa		11.64	□□□□□ -0.55
RFC5-208	ENST00000537315	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	PRMT5	O14744	637 aa	Predicted RBP	11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	ZNF185	O15231	689 aa		11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	HCRTR1	O43613	425 aa		11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	MT-ND3	P03897	115 aa		11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	CTSB	P07858	339 aa		11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	CCNYL3	P0C7X3	344 aa		11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	CYP2A7	P20853	494 aa		11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	PKLR	P30613	574 aa		11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	COIL	P38432	576 aa	Predicted RBP	11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	CCR10	P46092	362 aa		11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	NPY2R	P49146	381 aa		11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	TTPA	P49638	278 aa		11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	MC1R	Q01726	317 aa		11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	IL10RA	Q13651	578 aa		11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	TMED2	Q15363	201 aa		11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	ZIC1	Q15915	447 aa		11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	ZNF789	Q5FWF6	425 aa		11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	LCN10	Q6JVE6	187 aa		11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	CASC4	Q6P4E1	433 aa		11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	CCDC137	Q6PK04	289 aa	Known RBP	11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	CARF	Q8N187	725 aa		11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	C2orf73	Q8N5S3	287 aa	Predicted RBP	11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	C19orf47	Q8N9M1	422 aa	Known RBP	11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	FLVCR1-AS1	Q8TAF5	88 aa		11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	CPT1B	Q92523	772 aa		11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	MR1	Q95460	341 aa		11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	SGSM3	Q96HU1	749 aa		11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	PBK	Q96KB5	322 aa		11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	CATSPER2	Q96P56	530 aa		11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	OR2A14	Q96R47	310 aa		11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	OSBPL9	Q96SU4	736 aa		11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	KIFC1	Q9BW19	673 aa		11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	TSSK1B	Q9BXA7	367 aa		11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	FAM117A	Q9C073	453 aa		11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	TWSG1	Q9GZX9	223 aa		11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	MRM3	Q9HC36	420 aa	Known RBP	11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	KCND1	Q9NSA2	647 aa		11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	HOMER3	Q9NSC5	361 aa		11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	GEMIN8	Q9NWZ8	242 aa	Known RBP	11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	GNPTG	Q9UJJ9	305 aa		11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	PADI1	Q9ULC6	663 aa		11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	HEMK1	Q9Y5R4	338 aa	Predicted RBP	11.63	□□□□□ -0.55
RFC5-208	ENST00000537315	PRRC2C	Q9Y520	2896 aa	Known RBP	11.62	□□□□□ -0.55
RFC5-208	ENST00000537315	ASH1L	Q9NR48	2969 aa	Known RBP	11.62	□□□□□ -0.55
RFC5-208	ENST00000537315		A0A0J9YY10	115 aa		11.62	□□□□□ -0.55
RFC5-208	ENST00000537315	USP27X	A6NNY8	438 aa		11.62	□□□□□ -0.55
RFC5-208	ENST00000537315		F8W8V4	182 aa		11.62	□□□□□ -0.55
RFC5-208	ENST00000537315	PHF2	O75151	1096 aa		11.62	□□□□□ -0.55
RFC5-208	ENST00000537315	NIPSNAP2	O75323	286 aa		11.62	□□□□□ -0.55
RFC5-208	ENST00000537315	NDUFS3	O75489	264 aa		11.62	□□□□□ -0.55
RFC5-208	ENST00000537315	APOA4	P06727	396 aa		11.62	□□□□□ -0.55
RFC5-208	ENST00000537315	NR1D1	P20393	614 aa		11.62	□□□□□ -0.55
RFC5-208	ENST00000537315	AOAH	P28039	575 aa		11.62	□□□□□ -0.55
RFC5-208	ENST00000537315	PPARG	P37231	505 aa	Predicted RBP	11.62	□□□□□ -0.55
RFC5-208	ENST00000537315	MAGEA6	P43360	314 aa		11.62	□□□□□ -0.55
RFC5-208	ENST00000537315	CDK16	Q00536	496 aa		11.62	□□□□□ -0.55
RFC5-208	ENST00000537315	CYP1B1	Q16678	543 aa		11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms