RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 VANGL1Q8TAA9 524 aaPredicted RBP3.68□□□□□ -1.82
VBP1-203ENST00000535916 MOAP1Q96BY2 351 aa3.68□□□□□ -1.82
VBP1-203ENST00000535916 NCAPGQ9BPX3 1015 aa3.68□□□□□ -1.82
VBP1-203ENST00000535916 S1PR5Q9H228 398 aa3.68□□□□□ -1.82
VBP1-203ENST00000535916 GPR83Q9NYM4 423 aa3.68□□□□□ -1.82
VBP1-203ENST00000535916 AMACRQ9UHK6 382 aa3.68□□□□□ -1.82
VBP1-203ENST00000535916 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.68□□□□□ -1.82
VBP1-203ENST00000535916 A8MZ25 164 aa3.67□□□□□ -1.82
VBP1-203ENST00000535916 KLLNB2CW77 178 aa3.67□□□□□ -1.82
VBP1-203ENST00000535916 SRRM5B3KS81 715 aa3.67□□□□□ -1.82
VBP1-203ENST00000535916 CDH2P19022 906 aaPredicted RBP3.67□□□□□ -1.82
VBP1-203ENST00000535916 ITIH1P19827 911 aa3.67□□□□□ -1.82
VBP1-203ENST00000535916 LY6DQ14210 128 aa3.67□□□□□ -1.82
VBP1-203ENST00000535916 MELKQ14680 651 aa3.67□□□□□ -1.82
VBP1-203ENST00000535916 KIAA0930Q6ICG6 404 aaPredicted RBP3.67□□□□□ -1.82
VBP1-203ENST00000535916 CLEC4GQ6UXB4 293 aa3.67□□□□□ -1.82
VBP1-203ENST00000535916 BTN2A1Q7KYR7 527 aa3.67□□□□□ -1.82
VBP1-203ENST00000535916 NME8Q8N427 588 aa3.67□□□□□ -1.82
VBP1-203ENST00000535916 C17orf47Q8NEP4 570 aa3.67□□□□□ -1.82
VBP1-203ENST00000535916 OR13J1Q8NGT2 312 aa3.67□□□□□ -1.82
VBP1-203ENST00000535916 ERLEC1Q96DZ1 483 aa3.67□□□□□ -1.82
VBP1-203ENST00000535916 C16orf70Q9BSU1 422 aa3.67□□□□□ -1.82
VBP1-203ENST00000535916 RPP25Q9BUL9 199 aaKnown RBP3.67□□□□□ -1.82
VBP1-203ENST00000535916 TAS2R14Q9NYV8 317 aa3.67□□□□□ -1.82
VBP1-203ENST00000535916 MTUS1Q9ULD2 1270 aa3.67□□□□□ -1.82
VBP1-203ENST00000535916 LAS1LQ9Y4W2 734 aaKnown RBP3.67□□□□□ -1.82
VBP1-203ENST00000535916 KLF2Q9Y5W3 355 aaPredicted RBP3.67□□□□□ -1.82
VBP1-203ENST00000535916 PIAS3Q9Y6X2 628 aa3.67□□□□□ -1.82
VBP1-203ENST00000535916 MPTX1A8MV57 137 aa3.66□□□□□ -1.82
VBP1-203ENST00000535916 HMGB1P1B2RPK0 211 aaPredicted RBP3.66□□□□□ -1.82
VBP1-203ENST00000535916 WDHD1O75717 1129 aaPredicted RBP3.66□□□□□ -1.82
VBP1-203ENST00000535916 RSL1D1O76021 490 aaKnown RBP3.66□□□□□ -1.82
VBP1-203ENST00000535916 TPPPO94811 219 aa3.66□□□□□ -1.82
VBP1-203ENST00000535916 RTN3O95197 1032 aaPredicted RBP3.66□□□□□ -1.82
VBP1-203ENST00000535916 HSPA1AP0DMV8 641 aaKnown RBP3.66□□□□□ -1.82
VBP1-203ENST00000535916 HSPA1BP0DMV9 641 aaKnown RBP3.66□□□□□ -1.82
VBP1-203ENST00000535916 PRKACGP22612 351 aa3.66□□□□□ -1.82
VBP1-203ENST00000535916 PDX1P52945 283 aa3.66□□□□□ -1.82
VBP1-203ENST00000535916 HERV-K104P61576 105 aa3.66□□□□□ -1.82
VBP1-203ENST00000535916 SQLEQ14534 574 aa3.66□□□□□ -1.82
VBP1-203ENST00000535916 MOGAT2Q3SYC2 334 aa3.66□□□□□ -1.82
VBP1-203ENST00000535916 SLC25A53Q5H9E4 307 aa3.66□□□□□ -1.82
VBP1-203ENST00000535916 PDILTQ8N807 584 aa3.66□□□□□ -1.82
VBP1-203ENST00000535916 TRIML1Q8N9V2 468 aa3.66□□□□□ -1.82
VBP1-203ENST00000535916 UBE2Q2Q8WVN8 375 aa3.66□□□□□ -1.82
VBP1-203ENST00000535916 ZNF486Q96H40 463 aaPredicted RBP3.66□□□□□ -1.82
VBP1-203ENST00000535916 ZNF701Q9NV72 531 aaPredicted RBP3.66□□□□□ -1.82
VBP1-203ENST00000535916 OSER1Q9NX31 292 aa3.66□□□□□ -1.82
VBP1-203ENST00000535916 GRID1Q9ULK0 1009 aa3.66□□□□□ -1.82
VBP1-203ENST00000535916 ZNF646O15015 1829 aaPredicted RBP3.65□□□□□ -1.82
VBP1-203ENST00000535916 A0A1W2PR77 199 aa3.65□□□□□ -1.83
VBP1-203ENST00000535916 HYKKA2RU49 373 aa3.65□□□□□ -1.83
VBP1-203ENST00000535916 CENPBP07199 599 aaPredicted RBP3.65□□□□□ -1.83
VBP1-203ENST00000535916 RARGP13631 454 aa3.65□□□□□ -1.83
VBP1-203ENST00000535916 DLG2Q15700 870 aa3.65□□□□□ -1.83
VBP1-203ENST00000535916 SARM1Q6SZW1 724 aa3.65□□□□□ -1.83
VBP1-203ENST00000535916 ADGRA1Q86SQ6 560 aa3.65□□□□□ -1.83
VBP1-203ENST00000535916 AQP11Q8NBQ7 271 aa3.65□□□□□ -1.83
VBP1-203ENST00000535916 PPFIBP2Q8ND30 876 aa3.65□□□□□ -1.83
VBP1-203ENST00000535916 ARSGQ96EG1 525 aa3.65□□□□□ -1.83
VBP1-203ENST00000535916 NUP85Q9BW27 656 aa3.65□□□□□ -1.83
VBP1-203ENST00000535916 PUS3Q9BZE2 481 aaKnown RBP3.65□□□□□ -1.83
VBP1-203ENST00000535916 TUBE1Q9UJT0 475 aa3.65□□□□□ -1.83
VBP1-203ENST00000535916 PPP2R2CQ9Y2T4 447 aa3.65□□□□□ -1.83
VBP1-203ENST00000535916 RTL8CO15255 209 aa3.64□□□□□ -1.83
VBP1-203ENST00000535916 IGHV4-31P0DP07 118 aa3.64□□□□□ -1.83
VBP1-203ENST00000535916 PON1P27169 355 aa3.64□□□□□ -1.83
VBP1-203ENST00000535916 CYCSP99999 105 aaKnown RBP3.64□□□□□ -1.83
VBP1-203ENST00000535916 FAM98BQ52LJ0 330 aaKnown RBP3.64□□□□□ -1.83
VBP1-203ENST00000535916 XKR3Q5GH77 459 aa3.64□□□□□ -1.83
VBP1-203ENST00000535916 TBC1D1Q86TI0 1168 aaPredicted RBP3.64□□□□□ -1.83
VBP1-203ENST00000535916 TEX11Q8IYF3 940 aa3.64□□□□□ -1.83
VBP1-203ENST00000535916 RFFLQ8WZ73 363 aa3.64□□□□□ -1.83
VBP1-203ENST00000535916 POMGNT1Q8WZA1 660 aa3.64□□□□□ -1.83
VBP1-203ENST00000535916 IRGQQ8WZA9 623 aa3.64□□□□□ -1.83
VBP1-203ENST00000535916 CMTM3Q96MX0 182 aa3.64□□□□□ -1.83
VBP1-203ENST00000535916 GAL3ST4Q96RP7 486 aa3.64□□□□□ -1.83
VBP1-203ENST00000535916 SH2D4AQ9H788 454 aa3.64□□□□□ -1.83
VBP1-203ENST00000535916 FGF21Q9NSA1 209 aa3.64□□□□□ -1.83
VBP1-203ENST00000535916 TEX10Q9NXF1 929 aaPredicted RBP3.64□□□□□ -1.83
VBP1-203ENST00000535916 CACNG4Q9UBN1 327 aa3.64□□□□□ -1.83
VBP1-203ENST00000535916 ZHX1Q9UKY1 873 aaPredicted RBP3.64□□□□□ -1.83
VBP1-203ENST00000535916 CORO1CQ9ULV4 474 aaPredicted RBP3.64□□□□□ -1.83
VBP1-203ENST00000535916 SESN1Q9Y6P5 492 aa3.64□□□□□ -1.83
VBP1-203ENST00000535916 ANKRD61A6NGH8 418 aa3.63□□□□□ -1.83
VBP1-203ENST00000535916 SSX4O60224 188 aa3.63□□□□□ -1.83
VBP1-203ENST00000535916 PRLRP16471 622 aa3.63□□□□□ -1.83
VBP1-203ENST00000535916 GABRB1P18505 474 aa3.63□□□□□ -1.83
VBP1-203ENST00000535916 PSMA4P25789 261 aaKnown RBP3.63□□□□□ -1.83
VBP1-203ENST00000535916 TMEM50BP56557 158 aa3.63□□□□□ -1.83
VBP1-203ENST00000535916 ITPRIPL2Q3MIP1 535 aa3.63□□□□□ -1.83
VBP1-203ENST00000535916 PHLDA2Q53GA4 152 aa3.63□□□□□ -1.83
VBP1-203ENST00000535916 C20orf194Q5TEA3 1177 aa3.63□□□□□ -1.83
VBP1-203ENST00000535916 KLHL35Q6PF15 583 aa3.63□□□□□ -1.83
VBP1-203ENST00000535916 SLC25A47Q6Q0C1 308 aa3.63□□□□□ -1.83
VBP1-203ENST00000535916 TMEM207Q6UWW9 146 aa3.63□□□□□ -1.83
VBP1-203ENST00000535916 PXKQ7Z7A4 578 aa3.63□□□□□ -1.83
VBP1-203ENST00000535916 TMEM139Q8IV31 216 aa3.63□□□□□ -1.83
VBP1-203ENST00000535916 SMAP1Q8IYB5 467 aaPredicted RBP3.63□□□□□ -1.83
VBP1-203ENST00000535916 PHLDA1Q8WV24 401 aaPredicted RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms