RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 KRT33BQ14525 404 aa15.88■□□□□ 0.13
ATL3-202ENST00000535789 IL11RAQ14626 422 aa15.88■□□□□ 0.13
ATL3-202ENST00000535789 AARS2Q5JTZ9 985 aaKnown RBP15.88■□□□□ 0.13
ATL3-202ENST00000535789 PRAMEF17Q5VTA0 474 aa15.88■□□□□ 0.13
ATL3-202ENST00000535789 PWWP2BQ6NUJ5 590 aa15.88■□□□□ 0.13
ATL3-202ENST00000535789 CENPUQ71F23 418 aa15.88■□□□□ 0.13
ATL3-202ENST00000535789 TRIM73Q86UV7 250 aa15.88■□□□□ 0.13
ATL3-202ENST00000535789 AMIGO1Q86WK6 493 aa15.88■□□□□ 0.13
ATL3-202ENST00000535789 KMT5CQ86Y97 462 aa15.88■□□□□ 0.13
ATL3-202ENST00000535789 ZNF669Q96BR6 464 aaPredicted RBP15.88■□□□□ 0.13
ATL3-202ENST00000535789 ZNF501Q96CX3 271 aaPredicted RBP15.88■□□□□ 0.13
ATL3-202ENST00000535789 SIGLEC10Q96LC7 697 aa15.88■□□□□ 0.13
ATL3-202ENST00000535789 RUNDC3BQ96NL0 473 aa15.88■□□□□ 0.13
ATL3-202ENST00000535789 RUFY1Q96T51 708 aa15.88■□□□□ 0.13
ATL3-202ENST00000535789 KLHL25Q9H0H3 589 aa15.88■□□□□ 0.13
ATL3-202ENST00000535789 AKIRIN1Q9H9L7 192 aaPredicted RBP15.88■□□□□ 0.13
ATL3-202ENST00000535789 GALPQ9UBC7 116 aa15.88■□□□□ 0.13
ATL3-202ENST00000535789 CIDEBQ9UHD4 219 aa15.88■□□□□ 0.13
ATL3-202ENST00000535789 RUVBL2Q9Y230 463 aaKnown RBP15.88■□□□□ 0.13
ATL3-202ENST00000535789 ASF1AQ9Y294 204 aa15.88■□□□□ 0.13
ATL3-202ENST00000535789 TNRC6AQ8NDV7 1962 aaKnown RBP15.87■□□□□ 0.13
ATL3-202ENST00000535789 FAM237BA0A1B0GVD1 139 aa15.87■□□□□ 0.13
ATL3-202ENST00000535789 UBA6A0AVT1 1052 aaPredicted RBP15.87■□□□□ 0.13
ATL3-202ENST00000535789 SLC9B1P1A6NJY1 282 aa15.87■□□□□ 0.13
ATL3-202ENST00000535789 NIPSNAP2O75323 286 aa15.87■□□□□ 0.13
ATL3-202ENST00000535789 SLCO2B1O94956 709 aa15.87■□□□□ 0.13
ATL3-202ENST00000535789 ZBTB11O95625 1053 aaPredicted RBP15.87■□□□□ 0.13
ATL3-202ENST00000535789 UGT2B7P16662 529 aa15.87■□□□□ 0.13
ATL3-202ENST00000535789 PRDX3P30048 256 aaKnown RBP15.87■□□□□ 0.13
ATL3-202ENST00000535789 EIF3BP55884 814 aaKnown RBP15.87■□□□□ 0.13
ATL3-202ENST00000535789 HSD11B2P80365 405 aa15.87■□□□□ 0.13
ATL3-202ENST00000535789 MRPS25P82663 173 aaKnown RBP15.87■□□□□ 0.13
ATL3-202ENST00000535789 ABHD18Q0P651 414 aa15.87■□□□□ 0.13
ATL3-202ENST00000535789 HSPA14Q0VDF9 509 aa15.87■□□□□ 0.13
ATL3-202ENST00000535789 ABRQ12979 859 aa15.87■□□□□ 0.13
ATL3-202ENST00000535789 PTK6Q13882 451 aa15.87■□□□□ 0.13
ATL3-202ENST00000535789 DHX34Q14147 1143 aaKnown RBP15.87■□□□□ 0.13
ATL3-202ENST00000535789 GBX1Q14549 363 aa15.87■□□□□ 0.13
ATL3-202ENST00000535789 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.87■□□□□ 0.13
ATL3-202ENST00000535789 TEX35Q5T0J7 233 aa15.87■□□□□ 0.13
ATL3-202ENST00000535789 C8orf74Q6P047 294 aa15.87■□□□□ 0.13
ATL3-202ENST00000535789 UNC5AQ6ZN44 842 aa15.87■□□□□ 0.13
ATL3-202ENST00000535789 TMEM135Q86UB9 458 aa15.87■□□□□ 0.13
ATL3-202ENST00000535789 PPP1R3BQ86XI6 285 aa15.87■□□□□ 0.13
ATL3-202ENST00000535789 RASGRP3Q8IV61 690 aa15.87■□□□□ 0.13
ATL3-202ENST00000535789 TBC1D21Q8IYX1 336 aa15.87■□□□□ 0.13
ATL3-202ENST00000535789 EXD3Q8N9H8 876 aa15.87■□□□□ 0.13
ATL3-202ENST00000535789 LINC01555Q8NAE3 123 aa15.87■□□□□ 0.13
ATL3-202ENST00000535789 EXTL1Q92935 676 aa15.87■□□□□ 0.13
ATL3-202ENST00000535789 TRAPPC9Q96Q05 1148 aa15.87■□□□□ 0.13
ATL3-202ENST00000535789 WDR83Q9BRX9 315 aaKnown RBP15.87■□□□□ 0.13
ATL3-202ENST00000535789 LRRC1Q9BTT6 524 aa15.87■□□□□ 0.13
ATL3-202ENST00000535789 TRIT1Q9H3H1 467 aaKnown RBP15.87■□□□□ 0.13
ATL3-202ENST00000535789 FGF21Q9NSA1 209 aa15.87■□□□□ 0.13
ATL3-202ENST00000535789 ACTR10Q9NZ32 417 aa15.87■□□□□ 0.13
ATL3-202ENST00000535789 MED16Q9Y2X0 877 aa15.87■□□□□ 0.13
ATL3-202ENST00000535789 NFS1Q9Y697 457 aa15.87■□□□□ 0.13
ATL3-202ENST00000535789 DNALI1O14645 258 aaPredicted RBP15.86■□□□□ 0.13
ATL3-202ENST00000535789 TTI1O43156 1089 aa15.86■□□□□ 0.13
ATL3-202ENST00000535789 CHRM5P08912 532 aaPredicted RBP15.86■□□□□ 0.13
ATL3-202ENST00000535789 OGNP20774 298 aaKnown RBP15.86■□□□□ 0.13
ATL3-202ENST00000535789 CDH3P22223 829 aa15.86■□□□□ 0.13
ATL3-202ENST00000535789 MAP4P27816 1152 aaKnown RBP15.86■□□□□ 0.13
ATL3-202ENST00000535789 PKLRP30613 574 aa15.86■□□□□ 0.13
ATL3-202ENST00000535789 GABRA4P48169 554 aa15.86■□□□□ 0.13
ATL3-202ENST00000535789 DR1Q01658 176 aa15.86■□□□□ 0.13
ATL3-202ENST00000535789 ZIC1Q15915 447 aa15.86■□□□□ 0.13
ATL3-202ENST00000535789 CCSMST1Q4G0I0 132 aa15.86■□□□□ 0.13
ATL3-202ENST00000535789 ANKRD20A4Q4UJ75 823 aa15.86■□□□□ 0.13
ATL3-202ENST00000535789 MSS51Q4VC12 460 aa15.86■□□□□ 0.13
ATL3-202ENST00000535789 ATP1A1-AS1Q5TC04 95 aa15.86■□□□□ 0.13
ATL3-202ENST00000535789 SPESP1Q6UW49 350 aa15.86■□□□□ 0.13
ATL3-202ENST00000535789 CILP2Q8IUL8 1156 aa15.86■□□□□ 0.13
ATL3-202ENST00000535789 DENND6AQ8IWF6 608 aa15.86■□□□□ 0.13
ATL3-202ENST00000535789 CARFQ8N187 725 aa15.86■□□□□ 0.13
ATL3-202ENST00000535789 SLC38A9Q8NBW4 561 aa15.86■□□□□ 0.13
ATL3-202ENST00000535789 GRK7Q8WTQ7 553 aa15.86■□□□□ 0.13
ATL3-202ENST00000535789 FAM136AQ96C01 138 aa15.86■□□□□ 0.13
ATL3-202ENST00000535789 SLC45A3Q96JT2 553 aa15.86■□□□□ 0.13
ATL3-202ENST00000535789 OR2A14Q96R47 310 aa15.86■□□□□ 0.13
ATL3-202ENST00000535789 PLAC1Q9HBJ0 212 aa15.86■□□□□ 0.13
ATL3-202ENST00000535789 XAB2Q9HCS7 855 aaKnown RBP15.86■□□□□ 0.13
ATL3-202ENST00000535789 C1GALT1Q9NS00 363 aa15.86■□□□□ 0.13
ATL3-202ENST00000535789 LNPEPQ9UIQ6 1025 aa15.86■□□□□ 0.13
ATL3-202ENST00000535789 GNPTGQ9UJJ9 305 aa15.86■□□□□ 0.13
ATL3-202ENST00000535789 ANAPC5Q9UJX4 755 aa15.86■□□□□ 0.13
ATL3-202ENST00000535789 RARRES3Q9UL19 164 aa15.86■□□□□ 0.13
ATL3-202ENST00000535789 TDRKHQ9Y2W6 561 aaKnown RBP15.86■□□□□ 0.13
ATL3-202ENST00000535789 RPS6KL1Q9Y6S9 549 aa15.86■□□□□ 0.13
ATL3-202ENST00000535789 HELZ2Q9BYK8 2649 aaKnown RBP15.85■□□□□ 0.13
ATL3-202ENST00000535789 FAM187AA6NFU0 413 aa15.85■□□□□ 0.13
ATL3-202ENST00000535789 TK2O00142 265 aa15.85■□□□□ 0.13
ATL3-202ENST00000535789 TP73O15350 636 aa15.85■□□□□ 0.13
ATL3-202ENST00000535789 NKX2-8O15522 239 aa15.85■□□□□ 0.13
ATL3-202ENST00000535789 CTSBP07858 339 aa15.85■□□□□ 0.13
ATL3-202ENST00000535789 OAS2P29728 719 aaKnown RBP15.85■□□□□ 0.13
ATL3-202ENST00000535789 BDKRB1P46663 353 aa15.85■□□□□ 0.13
ATL3-202ENST00000535789 TUBB4BP68371 445 aa15.85■□□□□ 0.13
ATL3-202ENST00000535789 PRKAA1Q13131 559 aa15.85■□□□□ 0.13
ATL3-202ENST00000535789 TBR1Q16650 682 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms