RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 SRRDQ9UH36 339 aa6.5□□□□□ -1.37
USP28-202ENST00000535607 ZNF229Q9UJW7 825 aa6.5□□□□□ -1.37
USP28-202ENST00000535607 GJD2Q9UKL4 321 aa6.5□□□□□ -1.37
USP28-202ENST00000535607 CDC14AQ9UNH5 594 aa6.5□□□□□ -1.37
USP28-202ENST00000535607 ANGPTL3Q9Y5C1 460 aa6.5□□□□□ -1.37
USP28-202ENST00000535607 PCDHGA9Q9Y5G4 932 aaKnown RBP6.5□□□□□ -1.37
USP28-202ENST00000535607 PCDHGA8Q9Y5G5 932 aa6.5□□□□□ -1.37
USP28-202ENST00000535607 PCDHGA7Q9Y5G6 932 aa6.5□□□□□ -1.37
USP28-202ENST00000535607 PCDHGA6Q9Y5G7 932 aa6.5□□□□□ -1.37
USP28-202ENST00000535607 PCDHGA3Q9Y5H0 932 aa6.5□□□□□ -1.37
USP28-202ENST00000535607 COPG1Q9Y678 874 aaKnown RBP6.5□□□□□ -1.37
USP28-202ENST00000535607 SIP14410 1827 aa6.5□□□□□ -1.37
USP28-202ENST00000535607 ZSWIM8A7E2V4 1837 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 ILVBLA1L0T0 632 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 SYCE1LA8MT33 242 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 ANGPT2O15123 496 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 OGTO15294 1046 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 NCAM2O15394 837 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 GRID2O43424 1007 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 MRPS14O60783 128 aaKnown RBP6.49□□□□□ -1.37
USP28-202ENST00000535607 DAB1O75553 588 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 TIPRLO75663 272 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 MYO1DO94832 1006 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 SUPT7LO94864 414 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 CSPG5O95196 566 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 LY86O95711 162 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 UGT2B4P06133 528 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 HSD17B1P14061 328 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 C5AR1P21730 350 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 CYP2F1P24903 491 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 MGAT1P26572 445 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 CD40LGP29965 261 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 LRPAP1P30533 357 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 CSF2RBP32927 897 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 TCF7P36402 384 aaPredicted RBP6.49□□□□□ -1.37
USP28-202ENST00000535607 GRIA3P42263 894 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 SLC26A2P50443 739 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 RAD23AP54725 363 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 BNC1Q01954 994 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 CD69Q07108 199 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 GALNT2Q10471 571 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 PEX6Q13608 980 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 SELPLGQ14242 412 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 ODF1Q14990 250 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 EMC2Q15006 297 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 MLC1Q15049 377 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 KCNJ8Q15842 424 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 NEDD8Q15843 81 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 ZNF181Q2M3W8 571 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 ANKDD1AQ495B1 522 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 MINDY4Q4G0A6 757 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 AGKQ53H12 422 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 PPM1LQ5SGD2 360 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 MFSD14CQ5VZR4 134 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 OR6B2Q6IFH4 312 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 LCN8Q6JVE9 175 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 NPNTQ6UXI9 565 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 PLEKHG7Q6ZR37 379 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 KIAA0408Q6ZU52 694 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 CLEC14AQ86T13 490 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 LINC00523Q86TU6 105 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 ARMC8Q8IUR7 673 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 LRRC49Q8IUZ0 686 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 LYSMD2Q8IV50 215 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 FBXO16Q8IX29 292 aaPredicted RBP6.49□□□□□ -1.37
USP28-202ENST00000535607 DDIASQ8IXT1 998 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 C8orf59Q8N0T1 100 aaPredicted RBP6.49□□□□□ -1.37
USP28-202ENST00000535607 LGI4Q8N135 537 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 WDTC1Q8N5D0 677 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 MINDY1Q8N5J2 469 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 COLGALT1Q8NBJ5 622 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 GPR156Q8NFN8 814 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 OR7A2PQ8NGA2 310 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 JOSD2Q8TAC2 188 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 RXFP2Q8WXD0 754 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 HDAC10Q969S8 669 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 AURKBQ96GD4 344 aaPredicted RBP6.49□□□□□ -1.37
USP28-202ENST00000535607 SH3YL1Q96HL8 342 aaPredicted RBP6.49□□□□□ -1.37
USP28-202ENST00000535607 TMEM176AQ96HP8 235 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 ZNF512Q96ME7 567 aaPredicted RBP6.49□□□□□ -1.37
USP28-202ENST00000535607 DACH2Q96NX9 599 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 CYP2S1Q96SQ9 504 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 MRPL57Q9BQC6 102 aaKnown RBP6.49□□□□□ -1.37
USP28-202ENST00000535607 SEZ6LQ9BYH1 1024 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 R3HDMLQ9H3Y0 253 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 PRDM12Q9H4Q4 367 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 WDR55Q9H6Y2 383 aaPredicted RBP6.49□□□□□ -1.37
USP28-202ENST00000535607 FANCEQ9HB96 536 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 CNGB3Q9NQW8 809 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 FBXO8Q9NRD0 319 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 NRBP2Q9NSY0 501 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 TMEM45AQ9NWC5 275 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 DUS2Q9NX74 493 aaKnown RBP6.49□□□□□ -1.37
USP28-202ENST00000535607 GDAP2Q9NXN4 497 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 NPAP1Q9NZP6 1156 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 IFT80Q9P2H3 777 aaPredicted RBP6.49□□□□□ -1.37
USP28-202ENST00000535607 NCDNQ9UBB6 729 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 GABBR1Q9UBS5 961 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 CD300AQ9UGN4 299 aa6.49□□□□□ -1.37
USP28-202ENST00000535607 ANAPC2Q9UJX6 822 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms