RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 TBC1D21Q8IYX1 336 aa13.61□□□□□ -0.23
VPS11-205ENST00000534551 CACTIN-AS1Q8N1I8 211 aa13.61□□□□□ -0.23
VPS11-205ENST00000534551 UHMK1Q8TAS1 419 aaKnown RBP13.61□□□□□ -0.23
VPS11-205ENST00000534551 LIN37Q96GY3 246 aaPredicted RBP13.61□□□□□ -0.23
VPS11-205ENST00000534551 CNTNAP3BQ96NU0 1288 aa13.61□□□□□ -0.23
VPS11-205ENST00000534551 CNTNAP3Q9BZ76 1288 aa13.61□□□□□ -0.23
VPS11-205ENST00000534551 STRADBQ9C0K7 418 aa13.61□□□□□ -0.23
VPS11-205ENST00000534551 KLHL25Q9H0H3 589 aa13.61□□□□□ -0.23
VPS11-205ENST00000534551 SRMSQ9H3Y6 488 aa13.61□□□□□ -0.23
VPS11-205ENST00000534551 CAB39LQ9H9S4 337 aa13.61□□□□□ -0.23
VPS11-205ENST00000534551 HRASLS2Q9NWW9 162 aa13.61□□□□□ -0.23
VPS11-205ENST00000534551 OCIAD1Q9NX40 245 aa13.61□□□□□ -0.23
VPS11-205ENST00000534551 SPHK1Q9NYA1 384 aa13.61□□□□□ -0.23
VPS11-205ENST00000534551 PISDQ9UG56 409 aa13.61□□□□□ -0.23
VPS11-205ENST00000534551 IKZF3Q9UKT9 509 aa13.61□□□□□ -0.23
VPS11-205ENST00000534551 DHRS7Q9Y394 339 aa13.61□□□□□ -0.23
VPS11-205ENST00000534551 SPTBP11277 2137 aa13.61□□□□□ -0.23
VPS11-205ENST00000534551 KPNA5O15131 536 aa13.6□□□□□ -0.23
VPS11-205ENST00000534551 ZW10O43264 779 aa13.6□□□□□ -0.23
VPS11-205ENST00000534551 RASSF9O75901 435 aa13.6□□□□□ -0.23
VPS11-205ENST00000534551 C1orf105O95561 183 aa13.6□□□□□ -0.23
VPS11-205ENST00000534551 C9P02748 559 aa13.6□□□□□ -0.23
VPS11-205ENST00000534551 PVRP15151 417 aa13.6□□□□□ -0.23
VPS11-205ENST00000534551 ATP5DP30049 168 aa13.6□□□□□ -0.23
VPS11-205ENST00000534551 PKLRP30613 574 aa13.6□□□□□ -0.23
VPS11-205ENST00000534551 LSSP48449 732 aa13.6□□□□□ -0.23
VPS11-205ENST00000534551 SH3BP2P78314 561 aa13.6□□□□□ -0.23
VPS11-205ENST00000534551 PLOD1Q02809 727 aaPredicted RBP13.6□□□□□ -0.23
VPS11-205ENST00000534551 KCNAB1Q14722 419 aa13.6□□□□□ -0.23
VPS11-205ENST00000534551 FAM45BPQ6NSW5 357 aa13.6□□□□□ -0.23
VPS11-205ENST00000534551 TMEM207Q6UWW9 146 aa13.6□□□□□ -0.23
VPS11-205ENST00000534551 UNC5DQ6UXZ4 953 aa13.6□□□□□ -0.23
VPS11-205ENST00000534551 AMIGO1Q86WK6 493 aa13.6□□□□□ -0.23
VPS11-205ENST00000534551 FAM129CQ86XR2 697 aa13.6□□□□□ -0.23
VPS11-205ENST00000534551 CEP97Q8IW35 865 aa13.6□□□□□ -0.23
VPS11-205ENST00000534551 IFT20Q8IY31 132 aa13.6□□□□□ -0.23
VPS11-205ENST00000534551 ADGRF3Q8IZF5 1079 aa13.6□□□□□ -0.23
VPS11-205ENST00000534551 FBXO39Q8N4B4 442 aa13.6□□□□□ -0.23
VPS11-205ENST00000534551 LINC01555Q8NAE3 123 aa13.6□□□□□ -0.23
VPS11-205ENST00000534551 FAM45AQ8TCE6 357 aa13.6□□□□□ -0.23
VPS11-205ENST00000534551 DENND1AQ8TEH3 1009 aa13.6□□□□□ -0.23
VPS11-205ENST00000534551 INPP5DQ92835 1189 aa13.6□□□□□ -0.23
VPS11-205ENST00000534551 LINGO1Q96FE5 620 aa13.6□□□□□ -0.23
VPS11-205ENST00000534551 RBBP8Q99708 897 aa13.6□□□□□ -0.23
VPS11-205ENST00000534551 MAP3K3Q99759 626 aa13.6□□□□□ -0.23
VPS11-205ENST00000534551 FAM129AQ9BZQ8 928 aa13.6□□□□□ -0.23
VPS11-205ENST00000534551 UNKQ9C0B0 810 aaKnown RBP13.6□□□□□ -0.23
VPS11-205ENST00000534551 RHOJQ9H4E5 214 aa13.6□□□□□ -0.23
VPS11-205ENST00000534551 EPB41L1Q9H4G0 881 aa13.6□□□□□ -0.23
VPS11-205ENST00000534551 ANKZF1Q9H8Y5 726 aa13.6□□□□□ -0.23
VPS11-205ENST00000534551 LATS2Q9NRM7 1088 aa13.6□□□□□ -0.23
VPS11-205ENST00000534551 ADAMTS6Q9UKP5 1117 aa13.6□□□□□ -0.23
VPS11-205ENST00000534551 MTO1Q9Y2Z2 717 aaKnown RBP13.6□□□□□ -0.23
VPS11-205ENST00000534551 COMMD10Q9Y6G5 202 aa13.6□□□□□ -0.23
VPS11-205ENST00000534551 AK5Q9Y6K8 562 aa13.6□□□□□ -0.23
VPS11-205ENST00000534551 TPRP12270 2363 aaKnown RBP13.6□□□□□ -0.23
VPS11-205ENST00000534551 HEATR5BQ9P2D3 2071 aa13.6□□□□□ -0.23
VPS11-205ENST00000534551 CFAP47Q6ZTR5 3102 aa13.59□□□□□ -0.23
VPS11-205ENST00000534551 IGHV5-51A0A0C4DH38 117 aa13.59□□□□□ -0.23
VPS11-205ENST00000534551 EFCAB7A8K855 629 aa13.59□□□□□ -0.23
VPS11-205ENST00000534551 PLD2O14939 933 aa13.59□□□□□ -0.23
VPS11-205ENST00000534551 PHGDHO43175 533 aaKnown RBP13.59□□□□□ -0.23
VPS11-205ENST00000534551 PRAMEF10O60809 474 aa13.59□□□□□ -0.23
VPS11-205ENST00000534551 TNFSF15O95150 251 aa13.59□□□□□ -0.23
VPS11-205ENST00000534551 MATN4O95460 622 aa13.59□□□□□ -0.23
VPS11-205ENST00000534551 TSPAN12O95859 305 aa13.59□□□□□ -0.23
VPS11-205ENST00000534551 CHRM5P08912 532 aaPredicted RBP13.59□□□□□ -0.23
VPS11-205ENST00000534551 GSTA2P09210 222 aa13.59□□□□□ -0.23
VPS11-205ENST00000534551 PSMB5P28074 263 aa13.59□□□□□ -0.23
VPS11-205ENST00000534551 GP5P40197 560 aa13.59□□□□□ -0.23
VPS11-205ENST00000534551 MAPK10P53779 464 aa13.59□□□□□ -0.23
VPS11-205ENST00000534551 TAS2R39P59534 338 aa13.59□□□□□ -0.23
VPS11-205ENST00000534551 FOXK2Q01167 660 aa13.59□□□□□ -0.23
VPS11-205ENST00000534551 PDAP1Q13442 181 aaKnown RBP13.59□□□□□ -0.23
VPS11-205ENST00000534551 BMPR2Q13873 1038 aa13.59□□□□□ -0.23
VPS11-205ENST00000534551 COL9A2Q14055 689 aaPredicted RBP13.59□□□□□ -0.23
VPS11-205ENST00000534551 RTP5Q14D33 572 aa13.59□□□□□ -0.23
VPS11-205ENST00000534551 CLPPQ16740 277 aaPredicted RBP13.59□□□□□ -0.23
VPS11-205ENST00000534551 TTLL9Q3SXZ7 439 aa13.59□□□□□ -0.23
VPS11-205ENST00000534551 CACHD1Q5VU97 1274 aa13.59□□□□□ -0.23
VPS11-205ENST00000534551 MBOAT1Q6ZNC8 495 aa13.59□□□□□ -0.23
VPS11-205ENST00000534551 ARHGAP22Q7Z5H3 698 aa13.59□□□□□ -0.23
VPS11-205ENST00000534551 PLXDC1Q8IUK5 500 aa13.59□□□□□ -0.23
VPS11-205ENST00000534551 WDR36Q8NI36 951 aaKnown RBP13.59□□□□□ -0.23
VPS11-205ENST00000534551 FLVCR1-AS1Q8TAF5 88 aa13.59□□□□□ -0.23
VPS11-205ENST00000534551 GABPB2Q8TAK5 448 aaPredicted RBP13.59□□□□□ -0.23
VPS11-205ENST00000534551 EEF1AKMT1Q8WVE0 214 aa13.59□□□□□ -0.23
VPS11-205ENST00000534551 ZCCHC14Q8WYQ9 949 aaKnown RBP13.59□□□□□ -0.23
VPS11-205ENST00000534551 CDKL2Q92772 493 aa13.59□□□□□ -0.23
VPS11-205ENST00000534551 DLG3Q92796 817 aa13.59□□□□□ -0.23
VPS11-205ENST00000534551 CPNE1Q99829 537 aa13.59□□□□□ -0.23
VPS11-205ENST00000534551 NRSN2Q9GZP1 204 aa13.59□□□□□ -0.23
VPS11-205ENST00000534551 TFB2MQ9H5Q4 396 aaKnown RBP13.59□□□□□ -0.23
VPS11-205ENST00000534551 POLR1BQ9H9Y6 1135 aa13.59□□□□□ -0.23
VPS11-205ENST00000534551 ASCL3Q9NQ33 180 aa13.59□□□□□ -0.23
VPS11-205ENST00000534551 TAS2R13Q9NYV9 303 aa13.59□□□□□ -0.23
VPS11-205ENST00000534551 ACTR10Q9NZ32 417 aa13.59□□□□□ -0.23
VPS11-205ENST00000534551 PDP2Q9P2J9 529 aa13.59□□□□□ -0.23
VPS11-205ENST00000534551 POMT2Q9UKY4 750 aa13.59□□□□□ -0.23
VPS11-205ENST00000534551 ACACBO00763 2458 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms