RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 RPLP0P05388 317 aaKnown RBP16.98■□□□□ 0.31
NXF1-216ENST00000533499 C8GP07360 202 aa16.98■□□□□ 0.31
NXF1-216ENST00000533499 HIST1H2AGP0C0S8 130 aaPredicted RBP16.98■□□□□ 0.31
NXF1-216ENST00000533499 HIST1H2ADP20671 130 aa16.98■□□□□ 0.31
NXF1-216ENST00000533499 CYP2A7P20853 494 aa16.98■□□□□ 0.31
NXF1-216ENST00000533499 CCNFP41002 786 aa16.98■□□□□ 0.31
NXF1-216ENST00000533499 GLRBP48167 497 aa16.98■□□□□ 0.31
NXF1-216ENST00000533499 ACADVLP49748 655 aa16.98■□□□□ 0.31
NXF1-216ENST00000533499 ZNF844Q08AG5 666 aa16.98■□□□□ 0.31
NXF1-216ENST00000533499 CASP8Q14790 479 aa16.98■□□□□ 0.31
NXF1-216ENST00000533499 USP53Q70EK8 1073 aa16.98■□□□□ 0.31
NXF1-216ENST00000533499 FRA10AC1Q70Z53 315 aa16.98■□□□□ 0.31
NXF1-216ENST00000533499 TDRPQ86YL5 185 aa16.98■□□□□ 0.31
NXF1-216ENST00000533499 RBM12BQ8IXT5 1001 aaKnown RBP16.98■□□□□ 0.31
NXF1-216ENST00000533499 CYP4X1Q8N118 509 aa16.98■□□□□ 0.31
NXF1-216ENST00000533499 C2orf73Q8N5S3 287 aaPredicted RBP16.98■□□□□ 0.31
NXF1-216ENST00000533499 MAGEC3Q8TD91 643 aa16.98■□□□□ 0.31
NXF1-216ENST00000533499 RAD51AP1Q96B01 352 aa16.98■□□□□ 0.31
NXF1-216ENST00000533499 SCYL1Q96KG9 808 aa16.98■□□□□ 0.31
NXF1-216ENST00000533499 HIST1H2AHQ96KK5 128 aa16.98■□□□□ 0.31
NXF1-216ENST00000533499 IL17FQ96PD4 163 aa16.98■□□□□ 0.31
NXF1-216ENST00000533499 NRTNQ99748 197 aa16.98■□□□□ 0.31
NXF1-216ENST00000533499 HIST1H2AJQ99878 128 aa16.98■□□□□ 0.31
NXF1-216ENST00000533499 RTKNQ9BST9 563 aa16.98■□□□□ 0.31
NXF1-216ENST00000533499 H2AFJQ9BTM1 129 aa16.98■□□□□ 0.31
NXF1-216ENST00000533499 TRIM54Q9BYV2 358 aa16.98■□□□□ 0.31
NXF1-216ENST00000533499 SRMSQ9H3Y6 488 aa16.98■□□□□ 0.31
NXF1-216ENST00000533499 KIR3DX1Q9H7L2 352 aa16.98■□□□□ 0.31
NXF1-216ENST00000533499 ABCF3Q9NUQ8 709 aa16.98■□□□□ 0.31
NXF1-216ENST00000533499 UTP6Q9NYH9 597 aaKnown RBP16.98■□□□□ 0.31
NXF1-216ENST00000533499 COL5A1P20908 1838 aaPredicted RBP16.98■□□□□ 0.31
NXF1-216ENST00000533499 A0A1W2PPM1 405 aa16.97■□□□□ 0.31
NXF1-216ENST00000533499 PSIP1O75475 530 aaKnown RBP16.97■□□□□ 0.31
NXF1-216ENST00000533499 RFPL3O75679 317 aa16.97■□□□□ 0.31
NXF1-216ENST00000533499 TCEA3O75764 348 aa16.97■□□□□ 0.31
NXF1-216ENST00000533499 KCNK5O95279 499 aa16.97■□□□□ 0.31
NXF1-216ENST00000533499 LTA4HP09960 611 aaKnown RBP16.97■□□□□ 0.31
NXF1-216ENST00000533499 H2AFXP16104 143 aaPredicted RBP16.97■□□□□ 0.31
NXF1-216ENST00000533499 ACP1P24666 158 aa16.97■□□□□ 0.31
NXF1-216ENST00000533499 CCL7P80098 99 aa16.97■□□□□ 0.31
NXF1-216ENST00000533499 ARMC6Q6NXE6 501 aa16.97■□□□□ 0.31
NXF1-216ENST00000533499 SPRED1Q7Z699 444 aa16.97■□□□□ 0.31
NXF1-216ENST00000533499 TAX1BP1Q86VP1 789 aa16.97■□□□□ 0.31
NXF1-216ENST00000533499 RAB42Q8N4Z0 105 aa16.97■□□□□ 0.31
NXF1-216ENST00000533499 LMNTD1Q8N9Z9 388 aa16.97■□□□□ 0.31
NXF1-216ENST00000533499 MCOLN3Q8TDD5 553 aa16.97■□□□□ 0.31
NXF1-216ENST00000533499 ASB11Q8WXH4 323 aa16.97■□□□□ 0.31
NXF1-216ENST00000533499 NCSTNQ92542 709 aa16.97■□□□□ 0.31
NXF1-216ENST00000533499 NXNL1Q96CM4 212 aa16.97■□□□□ 0.31
NXF1-216ENST00000533499 DERL2Q9GZP9 239 aa16.97■□□□□ 0.31
NXF1-216ENST00000533499 NMRAL1Q9HBL8 299 aa16.97■□□□□ 0.31
NXF1-216ENST00000533499 IKZF3Q9UKT9 509 aa16.97■□□□□ 0.31
NXF1-216ENST00000533499 CNOT1A5YKK6 2376 aaKnown RBP16.97■□□□□ 0.31
NXF1-216ENST00000533499 UNC13CQ8NB66 2214 aa16.96■□□□□ 0.31
NXF1-216ENST00000533499 OR6C74A6NCV1 312 aa16.96■□□□□ 0.31
NXF1-216ENST00000533499 TM4SF5O14894 197 aa16.96■□□□□ 0.31
NXF1-216ENST00000533499 CASC3O15234 703 aaKnown RBP16.96■□□□□ 0.31
NXF1-216ENST00000533499 RGS16O15492 202 aaPredicted RBP16.96■□□□□ 0.31
NXF1-216ENST00000533499 B4GAT1O43505 415 aa16.96■□□□□ 0.31
NXF1-216ENST00000533499 RFPL1O75677 317 aa16.96■□□□□ 0.31
NXF1-216ENST00000533499 UBXN7O94888 489 aa16.96■□□□□ 0.31
NXF1-216ENST00000533499 GUCA1CO95843 209 aa16.96■□□□□ 0.31
NXF1-216ENST00000533499 PROS1P07225 676 aa16.96■□□□□ 0.31
NXF1-216ENST00000533499 FTH1P19P0C7X4 201 aa16.96■□□□□ 0.31
NXF1-216ENST00000533499 PYGBP11216 843 aa16.96■□□□□ 0.31
NXF1-216ENST00000533499 CEACAM1P13688 526 aa16.96■□□□□ 0.31
NXF1-216ENST00000533499 CD1DP15813 335 aa16.96■□□□□ 0.31
NXF1-216ENST00000533499 TFEBP19484 476 aa16.96■□□□□ 0.31
NXF1-216ENST00000533499 ATP6V0D1P61421 351 aa16.96■□□□□ 0.31
NXF1-216ENST00000533499 TSNQ15631 228 aaKnown RBP16.96■□□□□ 0.31
NXF1-216ENST00000533499 FAM83EQ2M2I3 478 aa16.96■□□□□ 0.31
NXF1-216ENST00000533499 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.96■□□□□ 0.31
NXF1-216ENST00000533499 KLC3Q6P597 504 aa16.96■□□□□ 0.31
NXF1-216ENST00000533499 IQCKQ8N0W5 287 aa16.96■□□□□ 0.31
NXF1-216ENST00000533499 RIBC1Q8N443 379 aaPredicted RBP16.96■□□□□ 0.31
NXF1-216ENST00000533499 ALKBH8Q96BT7 664 aaKnown RBP16.96■□□□□ 0.31
NXF1-216ENST00000533499 PDLIM5Q96HC4 596 aaKnown RBP16.96■□□□□ 0.31
NXF1-216ENST00000533499 PKP4Q99569 1192 aa16.96■□□□□ 0.31
NXF1-216ENST00000533499 EGFL8Q99944 293 aa16.96■□□□□ 0.31
NXF1-216ENST00000533499 LRRN3Q9H3W5 708 aa16.96■□□□□ 0.31
NXF1-216ENST00000533499 ALG9Q9H6U8 611 aa16.96■□□□□ 0.31
NXF1-216ENST00000533499 KLHL3Q9UH77 587 aa16.96■□□□□ 0.31
NXF1-216ENST00000533499 LNPEPQ9UIQ6 1025 aa16.96■□□□□ 0.31
NXF1-216ENST00000533499 ATXN7L1Q9ULK2 861 aaPredicted RBP16.96■□□□□ 0.31
NXF1-216ENST00000533499 APOBEC2Q9Y235 224 aaKnown RBP16.96■□□□□ 0.31
NXF1-216ENST00000533499 IGHV1OR21-1A0A087WYE8 117 aa16.95■□□□□ 0.3
NXF1-216ENST00000533499 GSAPA4D1B5 854 aa16.95■□□□□ 0.3
NXF1-216ENST00000533499 NCF1BA6NI72 391 aaPredicted RBP16.95■□□□□ 0.3
NXF1-216ENST00000533499 LILRA5A6NI73 299 aa16.95■□□□□ 0.3
NXF1-216ENST00000533499 GOLGA6L10A6NI86 522 aa16.95■□□□□ 0.3
NXF1-216ENST00000533499 NCF1CA8MVU1 366 aaPredicted RBP16.95■□□□□ 0.3
NXF1-216ENST00000533499 AGRPO00253 132 aa16.95■□□□□ 0.3
NXF1-216ENST00000533499 DUX1O43812 170 aa16.95■□□□□ 0.3
NXF1-216ENST00000533499 TOP3BO95985 862 aaKnown RBP16.95■□□□□ 0.3
NXF1-216ENST00000533499 NCF1P14598 390 aaPredicted RBP16.95■□□□□ 0.3
NXF1-216ENST00000533499 PNLIPP16233 465 aa16.95■□□□□ 0.3
NXF1-216ENST00000533499 POLR2CP19387 275 aaPredicted RBP16.95■□□□□ 0.3
NXF1-216ENST00000533499 GPR3P46089 330 aa16.95■□□□□ 0.3
NXF1-216ENST00000533499 DLG1Q12959 904 aa16.95■□□□□ 0.3
NXF1-216ENST00000533499 PRKAA1Q13131 559 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms