RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 ASZ1Q8WWH4 475 aa14.95□□□□□ -0.02
CPSF1-211ENST00000533492 THAP4Q8WY91 577 aa14.95□□□□□ -0.02
CPSF1-211ENST00000533492 CARD6Q9BX69 1037 aa14.95□□□□□ -0.02
CPSF1-211ENST00000533492 CHST8Q9H2A9 424 aa14.95□□□□□ -0.02
CPSF1-211ENST00000533492 ACTR5Q9H9F9 607 aaPredicted RBP14.95□□□□□ -0.02
CPSF1-211ENST00000533492 EIF2B3Q9NR50 452 aaKnown RBP14.95□□□□□ -0.02
CPSF1-211ENST00000533492 HOMER3Q9NSC5 361 aa14.95□□□□□ -0.02
CPSF1-211ENST00000533492 CATSPERZQ9NTU4 200 aa14.95□□□□□ -0.02
CPSF1-211ENST00000533492 OR6C2Q9NZP2 312 aa14.95□□□□□ -0.02
CPSF1-211ENST00000533492 ANAPC2Q9UJX6 822 aa14.95□□□□□ -0.02
CPSF1-211ENST00000533492 ISM1B1AKI9 464 aa14.94□□□□□ -0.02
CPSF1-211ENST00000533492 E7EQ34 232 aa14.94□□□□□ -0.02
CPSF1-211ENST00000533492 CD3EAPO15446 510 aaKnown RBP14.94□□□□□ -0.02
CPSF1-211ENST00000533492 RFPL1O75677 317 aa14.94□□□□□ -0.02
CPSF1-211ENST00000533492 APOA4P06727 396 aa14.94□□□□□ -0.02
CPSF1-211ENST00000533492 CHRM5P08912 532 aaPredicted RBP14.94□□□□□ -0.02
CPSF1-211ENST00000533492 HBQ1P09105 142 aa14.94□□□□□ -0.02
CPSF1-211ENST00000533492 UGT2B7P16662 529 aa14.94□□□□□ -0.02
CPSF1-211ENST00000533492 CCR7P32248 378 aa14.94□□□□□ -0.02
CPSF1-211ENST00000533492 CXCR5P32302 372 aa14.94□□□□□ -0.02
CPSF1-211ENST00000533492 TTPAP49638 278 aa14.94□□□□□ -0.02
CPSF1-211ENST00000533492 ITGA1P56199 1179 aa14.94□□□□□ -0.02
CPSF1-211ENST00000533492 TLE1Q04724 770 aa14.94□□□□□ -0.02
CPSF1-211ENST00000533492 ABRQ12979 859 aa14.94□□□□□ -0.02
CPSF1-211ENST00000533492 SEMA3AQ14563 771 aa14.94□□□□□ -0.02
CPSF1-211ENST00000533492 DNAJC21Q5F1R6 531 aaKnown RBP14.94□□□□□ -0.02
CPSF1-211ENST00000533492 IZUMO3Q5VZ72 239 aa14.94□□□□□ -0.02
CPSF1-211ENST00000533492 PTRHD1Q6GMV3 140 aaKnown RBP14.94□□□□□ -0.02
CPSF1-211ENST00000533492 LDB1Q86U70 411 aaPredicted RBP14.94□□□□□ -0.02
CPSF1-211ENST00000533492 DSELQ8IZU8 1212 aa14.94□□□□□ -0.02
CPSF1-211ENST00000533492 CFAP61Q8NHU2 1237 aa14.94□□□□□ -0.02
CPSF1-211ENST00000533492 GSDMBQ8TAX9 411 aa14.94□□□□□ -0.02
CPSF1-211ENST00000533492 TCTN2Q96GX1 697 aa14.94□□□□□ -0.02
CPSF1-211ENST00000533492 AP1M1Q9BXS5 423 aa14.94□□□□□ -0.02
CPSF1-211ENST00000533492 IL22Q9GZX6 179 aa14.94□□□□□ -0.02
CPSF1-211ENST00000533492 TENM4Q6N022 2769 aa14.94□□□□□ -0.02
CPSF1-211ENST00000533492 SEC16AO15027 2179 aa14.94□□□□□ -0.02
CPSF1-211ENST00000533492 IQCF5A8MTL0 148 aa14.93□□□□□ -0.02
CPSF1-211ENST00000533492 PRMT5O14744 637 aaPredicted RBP14.93□□□□□ -0.02
CPSF1-211ENST00000533492 NDUFS3O75489 264 aa14.93□□□□□ -0.02
CPSF1-211ENST00000533492 RPN2P04844 631 aa14.93□□□□□ -0.02
CPSF1-211ENST00000533492 RAB40ALP0C0E4 278 aa14.93□□□□□ -0.02
CPSF1-211ENST00000533492 AGXTP21549 392 aa14.93□□□□□ -0.02
CPSF1-211ENST00000533492 PMS2P54278 862 aa14.93□□□□□ -0.02
CPSF1-211ENST00000533492 CRADDP78560 199 aa14.93□□□□□ -0.02
CPSF1-211ENST00000533492 TMED2Q15363 201 aa14.93□□□□□ -0.02
CPSF1-211ENST00000533492 UGT8Q16880 541 aa14.93□□□□□ -0.02
CPSF1-211ENST00000533492 TCTN3Q6NUS6 607 aa14.93□□□□□ -0.02
CPSF1-211ENST00000533492 ZNF517Q6ZMY9 492 aaPredicted RBP14.93□□□□□ -0.02
CPSF1-211ENST00000533492 CDHR3Q6ZTQ4 885 aa14.93□□□□□ -0.02
CPSF1-211ENST00000533492 TRIM73Q86UV7 250 aa14.93□□□□□ -0.02
CPSF1-211ENST00000533492 SLC22A15Q8IZD6 547 aa14.93□□□□□ -0.02
CPSF1-211ENST00000533492 OTUD6BQ8N6M0 293 aa14.93□□□□□ -0.02
CPSF1-211ENST00000533492 C19orf47Q8N9M1 422 aaKnown RBP14.93□□□□□ -0.02
CPSF1-211ENST00000533492 PANX3Q96QZ0 392 aa14.93□□□□□ -0.02
CPSF1-211ENST00000533492 OR2A14Q96R47 310 aa14.93□□□□□ -0.02
CPSF1-211ENST00000533492 SPHK1Q9NYA1 384 aa14.93□□□□□ -0.02
CPSF1-211ENST00000533492 TLK1Q9UKI8 766 aa14.93□□□□□ -0.02
CPSF1-211ENST00000533492 PLAGL1Q9UM63 463 aa14.93□□□□□ -0.02
CPSF1-211ENST00000533492 SNX7Q9UNH6 387 aa14.93□□□□□ -0.02
CPSF1-211ENST00000533492 TP53TG5Q9Y2B4 290 aa14.93□□□□□ -0.02
CPSF1-211ENST00000533492 A0A0J9YY10 115 aa14.92□□□□□ -0.02
CPSF1-211ENST00000533492 ZNF749O43361 778 aa14.92□□□□□ -0.02
CPSF1-211ENST00000533492 GPC4O75487 556 aa14.92□□□□□ -0.02
CPSF1-211ENST00000533492 OR2B3O76000 313 aa14.92□□□□□ -0.02
CPSF1-211ENST00000533492 NMBRP28336 390 aa14.92□□□□□ -0.02
CPSF1-211ENST00000533492 RORAP35398 523 aa14.92□□□□□ -0.02
CPSF1-211ENST00000533492 CASRP41180 1078 aa14.92□□□□□ -0.02
CPSF1-211ENST00000533492 TERF1P54274 439 aa14.92□□□□□ -0.02
CPSF1-211ENST00000533492 SARNPP82979 210 aaKnown RBP14.92□□□□□ -0.02
CPSF1-211ENST00000533492 CDK16Q00536 496 aa14.92□□□□□ -0.02
CPSF1-211ENST00000533492 KIR2DS3Q14952 304 aa14.92□□□□□ -0.02
CPSF1-211ENST00000533492 ZNF789Q5FWF6 425 aa14.92□□□□□ -0.02
CPSF1-211ENST00000533492 TTC23LQ6PF05 361 aa14.92□□□□□ -0.02
CPSF1-211ENST00000533492 APLFQ8IW19 511 aaPredicted RBP14.92□□□□□ -0.02
CPSF1-211ENST00000533492 SYTL1Q8IYJ3 562 aa14.92□□□□□ -0.02
CPSF1-211ENST00000533492 KRT222Q8N1A0 295 aa14.92□□□□□ -0.02
CPSF1-211ENST00000533492 ENDOVQ8N8Q3 282 aaKnown RBP14.92□□□□□ -0.02
CPSF1-211ENST00000533492 TEX19Q8NA77 164 aa14.92□□□□□ -0.02
CPSF1-211ENST00000533492 NLNQ9BYT8 704 aa14.92□□□□□ -0.02
CPSF1-211ENST00000533492 EPN3Q9H201 632 aa14.92□□□□□ -0.02
CPSF1-211ENST00000533492 FAM60AQ9NP50 221 aa14.92□□□□□ -0.02
CPSF1-211ENST00000533492 PCMTD2Q9NV79 361 aa14.92□□□□□ -0.02
CPSF1-211ENST00000533492 IRAK4Q9NWZ3 460 aa14.92□□□□□ -0.02
CPSF1-211ENST00000533492 MARCH4Q9P2E8 410 aaPredicted RBP14.92□□□□□ -0.02
CPSF1-211ENST00000533492 GNPTGQ9UJJ9 305 aa14.92□□□□□ -0.02
CPSF1-211ENST00000533492 PPP2R2CQ9Y2T4 447 aa14.92□□□□□ -0.02
CPSF1-211ENST00000533492 AP1M2Q9Y6Q5 423 aa14.92□□□□□ -0.02
CPSF1-211ENST00000533492 C9J4A7 227 aa14.91□□□□□ -0.02
CPSF1-211ENST00000533492 KPNA5O15131 536 aa14.91□□□□□ -0.02
CPSF1-211ENST00000533492 PFDN6O15212 129 aa14.91□□□□□ -0.02
CPSF1-211ENST00000533492 TPBGLP0DKB5 382 aa14.91□□□□□ -0.02
CPSF1-211ENST00000533492 NR1D1P20393 614 aa14.91□□□□□ -0.02
CPSF1-211ENST00000533492 MGAT1P26572 445 aa14.91□□□□□ -0.02
CPSF1-211ENST00000533492 AOAHP28039 575 aa14.91□□□□□ -0.02
CPSF1-211ENST00000533492 RAB28P51157 221 aa14.91□□□□□ -0.02
CPSF1-211ENST00000533492 CCZ1BP86790 482 aa14.91□□□□□ -0.02
CPSF1-211ENST00000533492 CCZ1P86791 482 aaPredicted RBP14.91□□□□□ -0.02
CPSF1-211ENST00000533492 KLRB1Q12918 225 aa14.91□□□□□ -0.02
CPSF1-211ENST00000533492 IL10RAQ13651 578 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms