RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 PFKLP17858 780 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 GNPDA1P46926 289 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 HSPA7P48741 367 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 KCNQ1P51787 676 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 CXCR4P61073 352 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 RAPSNQ13702 412 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 GPR162Q16538 588 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 DGUOKQ16854 277 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 GTDC1Q4AE62 458 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 DNAJC14Q6Y2X3 702 aaPredicted RBP16.28■□□□□ 0.2
CTSB-228ENST00000533455 NEK10Q6ZWH5 1172 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 DET1Q7L5Y6 550 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 HOMEZQ8IX15 550 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 CNIH3Q8TBE1 160 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 MCOLN3Q8TDD5 553 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 ZFP90Q8TF47 636 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 PHF10Q8WUB8 498 aaKnown RBP16.28■□□□□ 0.2
CTSB-228ENST00000533455 UBTD2Q8WUN7 234 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 RORBQ92753 470 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 NCLNQ969V3 563 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 ABHD8Q96I13 439 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 SPATA17Q96L03 361 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 CCDC90BQ9GZT6 254 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 NSUN3Q9H649 340 aaKnown RBP16.28■□□□□ 0.2
CTSB-228ENST00000533455 TRPS1Q9UHF7 1281 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 ZMYM5Q9UJ78 669 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 TLR5O60602 858 aa16.27■□□□□ 0.2
CTSB-228ENST00000533455 CNOT3O75175 753 aaKnown RBP16.27■□□□□ 0.2
CTSB-228ENST00000533455 RPS3P23396 243 aaKnown RBP eCLIP16.27■□□□□ 0.21e-9■■■□□ 18.4
CTSB-228ENST00000533455 HUNKP57058 714 aa16.27■□□□□ 0.2
CTSB-228ENST00000533455 SLC35A2P78381 396 aa16.27■□□□□ 0.2
CTSB-228ENST00000533455 IL5RAQ01344 420 aa16.27■□□□□ 0.2
CTSB-228ENST00000533455 VAC14Q08AM6 782 aa16.27■□□□□ 0.2
CTSB-228ENST00000533455 PPP1R8Q12972 351 aaKnown RBP16.27■□□□□ 0.2
CTSB-228ENST00000533455 KEAP1Q14145 624 aa16.27■□□□□ 0.2
CTSB-228ENST00000533455 ADPRMQ3LIE5 342 aa16.27■□□□□ 0.2
CTSB-228ENST00000533455 USP39Q53GS9 565 aaKnown RBP16.27■□□□□ 0.2
CTSB-228ENST00000533455 CAPN13Q6MZZ7 669 aaPredicted RBP16.27■□□□□ 0.2
CTSB-228ENST00000533455 B3GNT8Q7Z7M8 397 aa16.27■□□□□ 0.2
CTSB-228ENST00000533455 NAT16Q8N8M0 369 aa16.27■□□□□ 0.2
CTSB-228ENST00000533455 TRPV1Q8NER1 839 aa16.27■□□□□ 0.2
CTSB-228ENST00000533455 NETO1Q8TDF5 533 aa16.27■□□□□ 0.2
CTSB-228ENST00000533455 PYURFQ96I23 114 aa16.27■□□□□ 0.2
CTSB-228ENST00000533455 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.27■□□□□ 0.21e-7■■■□□ 16.2
CTSB-228ENST00000533455 KCNH6Q9H252 994 aa16.27■□□□□ 0.2
CTSB-228ENST00000533455 ATP13A3Q9H7F0 1226 aa16.27■□□□□ 0.2
CTSB-228ENST00000533455 LRTM1Q9HBL6 345 aa16.27■□□□□ 0.2
CTSB-228ENST00000533455 TMEM165Q9HC07 324 aa16.27■□□□□ 0.2
CTSB-228ENST00000533455 EXD2Q9NVH0 621 aa16.27■□□□□ 0.2
CTSB-228ENST00000533455 DNMT3BQ9UBC3 853 aaKnown RBP16.27■□□□□ 0.2
CTSB-228ENST00000533455 FBXO10Q9UK96 956 aa16.27■□□□□ 0.2
CTSB-228ENST00000533455 TPRKBQ9Y3C4 175 aa16.27■□□□□ 0.2
CTSB-228ENST00000533455 PCDHGA10Q9Y5H3 936 aa16.27■□□□□ 0.2
CTSB-228ENST00000533455 A0A096LPI6 279 aa16.26■□□□□ 0.19
CTSB-228ENST00000533455 ILVBLA1L0T0 632 aa16.26■□□□□ 0.19
CTSB-228ENST00000533455 AQP9O43315 295 aa16.26■□□□□ 0.19
CTSB-228ENST00000533455 XPNPEP2O43895 674 aa16.26■□□□□ 0.19
CTSB-228ENST00000533455 MRPS14O60783 128 aaKnown RBP16.26■□□□□ 0.19
CTSB-228ENST00000533455 HOXB9P17482 250 aaPredicted RBP16.26■□□□□ 0.19
CTSB-228ENST00000533455 TGM1P22735 817 aa16.26■□□□□ 0.19
CTSB-228ENST00000533455 IGFBP5P24593 272 aa16.26■□□□□ 0.19
CTSB-228ENST00000533455 CD6P30203 668 aa16.26■□□□□ 0.19
CTSB-228ENST00000533455 GRK3P35626 688 aa16.26■□□□□ 0.19
CTSB-228ENST00000533455 SERPINB10P48595 397 aa16.26■□□□□ 0.19
CTSB-228ENST00000533455 CTXN3Q4LDR2 81 aa16.26■□□□□ 0.19
CTSB-228ENST00000533455 SYT6Q5T7P8 510 aaPredicted RBP16.26■□□□□ 0.19
CTSB-228ENST00000533455 AGAP7PQ5VUJ5 663 aa16.26■□□□□ 0.19
CTSB-228ENST00000533455 CPZQ66K79 652 aa16.26■□□□□ 0.19
CTSB-228ENST00000533455 SUSD1Q6UWL2 747 aa16.26■□□□□ 0.19
CTSB-228ENST00000533455 GLB1LQ6UWU2 654 aa16.26■□□□□ 0.19
CTSB-228ENST00000533455 GCNT7Q6ZNI0 430 aa16.26■□□□□ 0.19
CTSB-228ENST00000533455 LRRC8DQ7L1W4 858 aa16.26■□□□□ 0.19
CTSB-228ENST00000533455 PHACTR4Q8IZ21 702 aa16.26■□□□□ 0.19
CTSB-228ENST00000533455 KRTCAP2Q8N6L1 136 aa16.26■□□□□ 0.19
CTSB-228ENST00000533455 OR6Q1Q8NGQ2 317 aa16.26■□□□□ 0.19
CTSB-228ENST00000533455 FAM120BQ96EK7 910 aaKnown RBP16.26■□□□□ 0.19
CTSB-228ENST00000533455 OR52E6Q96RD3 313 aa16.26■□□□□ 0.19
CTSB-228ENST00000533455 ZNF300Q96RE9 604 aaPredicted RBP16.26■□□□□ 0.19
CTSB-228ENST00000533455 FAM126AQ9BYI3 521 aaPredicted RBP16.26■□□□□ 0.19
CTSB-228ENST00000533455 TNKS2Q9H2K2 1166 aa16.26■□□□□ 0.19
CTSB-228ENST00000533455 VNN3Q9NY84 501 aa16.26■□□□□ 0.19
CTSB-228ENST00000533455 IL17CQ9P0M4 197 aa16.26■□□□□ 0.19
CTSB-228ENST00000533455 ERVK-18Q9QC07 812 aa16.26■□□□□ 0.19
CTSB-228ENST00000533455 ZNF106Q9H2Y7 1883 aaKnown RBP16.26■□□□□ 0.19
CTSB-228ENST00000533455 PCNTO95613 3336 aa16.26■□□□□ 0.19
CTSB-228ENST00000533455 TRIM43BA6NCK2 446 aa16.26■□□□□ 0.19
CTSB-228ENST00000533455 TMEM247A6NEH6 219 aa16.26■□□□□ 0.19
CTSB-228ENST00000533455 OR6C75A6NL08 312 aa16.26■□□□□ 0.19
CTSB-228ENST00000533455 M0R3G1 203 aa16.26■□□□□ 0.19
CTSB-228ENST00000533455 WNT9AO14904 365 aa16.26■□□□□ 0.19
CTSB-228ENST00000533455 CLDN11O75508 207 aa16.26■□□□□ 0.19
CTSB-228ENST00000533455 HMGCS1Q01581 520 aa16.26■□□□□ 0.19
CTSB-228ENST00000533455 IFITM3Q01628 133 aa16.26■□□□□ 0.19
CTSB-228ENST00000533455 MRPL58Q14197 206 aaKnown RBP16.26■□□□□ 0.19
CTSB-228ENST00000533455 PERM1Q5SV97 790 aa16.26■□□□□ 0.19
CTSB-228ENST00000533455 METTL2BQ6P1Q9 378 aaKnown RBP16.26■□□□□ 0.19
CTSB-228ENST00000533455 CERS6Q6ZMG9 384 aa16.26■□□□□ 0.19
CTSB-228ENST00000533455 NDNFQ8TB73 568 aa16.26■□□□□ 0.19
CTSB-228ENST00000533455 DYNC2LI1Q8TCX1 351 aa16.26■□□□□ 0.19
CTSB-228ENST00000533455 USP7Q93009 1102 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms