RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 PDIK1LQ8N165 341 aa9.54□□□□□ -0.88
NUP98-220ENST00000533346 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.54□□□□□ -0.88
NUP98-220ENST00000533346 FBXO15Q8NCQ5 510 aaPredicted RBP9.54□□□□□ -0.88
NUP98-220ENST00000533346 PHC3Q8NDX5 983 aa9.54□□□□□ -0.88
NUP98-220ENST00000533346 NLGN4YQ8NFZ3 816 aaPredicted RBP9.54□□□□□ -0.88
NUP98-220ENST00000533346 OR5AR1Q8NGP9 310 aa9.54□□□□□ -0.88
NUP98-220ENST00000533346 KCNJ9Q92806 393 aa9.54□□□□□ -0.88
NUP98-220ENST00000533346 PMEPA1Q969W9 287 aa9.54□□□□□ -0.88
NUP98-220ENST00000533346 RAD51AP1Q96B01 352 aa9.54□□□□□ -0.88
NUP98-220ENST00000533346 ZNF669Q96BR6 464 aaPredicted RBP9.54□□□□□ -0.88
NUP98-220ENST00000533346 SNF8Q96H20 258 aa9.54□□□□□ -0.88
NUP98-220ENST00000533346 CAPZA3Q96KX2 299 aa9.54□□□□□ -0.88
NUP98-220ENST00000533346 LRFN5Q96NI6 719 aa9.54□□□□□ -0.88
NUP98-220ENST00000533346 FAM167BQ9BTA0 163 aa9.54□□□□□ -0.88
NUP98-220ENST00000533346 EFHD1Q9BUP0 239 aa9.54□□□□□ -0.88
NUP98-220ENST00000533346 PHACTR1Q9C0D0 580 aa9.54□□□□□ -0.88
NUP98-220ENST00000533346 APMAPQ9HDC9 416 aa9.54□□□□□ -0.88
NUP98-220ENST00000533346 PDE7BQ9NP56 450 aa9.54□□□□□ -0.88
NUP98-220ENST00000533346 ASH1LQ9NR48 2969 aaKnown RBP9.54□□□□□ -0.88
NUP98-220ENST00000533346 ICKQ9UPZ9 632 aa9.54□□□□□ -0.88
NUP98-220ENST00000533346 MED16Q9Y2X0 877 aa9.54□□□□□ -0.88
NUP98-220ENST00000533346 KLK4Q9Y5K2 254 aa9.54□□□□□ -0.88
NUP98-220ENST00000533346 AHCTF1Q8WYP5 2266 aa9.54□□□□□ -0.88
NUP98-220ENST00000533346 SNRNP200O75643 2136 aaKnown RBP9.53□□□□□ -0.88
NUP98-220ENST00000533346 PIPSLA2A3N6 862 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 CYSRT1A8MQ03 144 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 GOLGA8MH3BSY2 632 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 TERTO14746 1132 aaKnown RBP9.53□□□□□ -0.88
NUP98-220ENST00000533346 TTI1O43156 1089 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 PRICKLE3O43900 615 aaPredicted RBP9.53□□□□□ -0.88
NUP98-220ENST00000533346 RAD1O60671 282 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 RASSF9O75901 435 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 CBSLP0DN79 551 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 ERGP11308 486 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 FOLR1P15328 257 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 POLR2CP19387 275 aaPredicted RBP9.53□□□□□ -0.88
NUP98-220ENST00000533346 PKLRP30613 574 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 CBSP35520 551 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 RAB28P51157 221 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 CLCN7P51798 805 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 EIF3BP55884 814 aaKnown RBP9.53□□□□□ -0.88
NUP98-220ENST00000533346 TUBB4BP68371 445 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 SH3BP2P78314 561 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 ILF2Q12905 390 aaKnown RBP9.53□□□□□ -0.88
NUP98-220ENST00000533346 THOC5Q13769 683 aaKnown RBP9.53□□□□□ -0.88
NUP98-220ENST00000533346 TUBB2AQ13885 445 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 CRYMQ14894 314 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 TGIF1Q15583 401 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 KCTD19Q17RG1 926 aaPredicted RBP9.53□□□□□ -0.88
NUP98-220ENST00000533346 SLC5A12Q1EHB4 618 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 MSS51Q4VC12 460 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 ZNF789Q5FWF6 425 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 TMTC4Q5T4D3 741 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 CCDC81Q6ZN84 652 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 TIPARPQ7Z3E1 657 aaKnown RBP9.53□□□□□ -0.88
NUP98-220ENST00000533346 PPP1R3BQ86XI6 285 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 KLHL7Q8IXQ5 586 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 KRT222Q8N1A0 295 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 ESX1Q8N693 406 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 SIDT2Q8NBJ9 832 aaKnown RBP9.53□□□□□ -0.88
NUP98-220ENST00000533346 C2CD4AQ8NCU7 369 aaPredicted RBP9.53□□□□□ -0.88
NUP98-220ENST00000533346 OR2L8Q8NGY9 312 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 MAGEC3Q8TD91 643 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 SLC22A18Q96BI1 424 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 ZNF501Q96CX3 271 aaPredicted RBP9.53□□□□□ -0.88
NUP98-220ENST00000533346 TRAPPC9Q96Q05 1148 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 OR2A14Q96R47 310 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 OR6C1Q96RD1 312 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 UBL7Q96S82 380 aaPredicted RBP9.53□□□□□ -0.88
NUP98-220ENST00000533346 TRIM56Q9BRZ2 755 aaKnown RBP9.53□□□□□ -0.88
NUP98-220ENST00000533346 ERP44Q9BS26 406 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 TUBB2BQ9BVA1 445 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 RAB11FIP5Q9BXF6 653 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 ZMYND15Q9H091 742 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 PLAC1Q9HBJ0 212 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 ACTR10Q9NZ32 417 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 WHRNQ9P202 907 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 FAM8A1Q9UBU6 413 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 KLHL3Q9UH77 587 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 FBXO5Q9UKT4 447 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 RARRES3Q9UL19 164 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 DHRS7Q9Y394 339 aa9.53□□□□□ -0.88
NUP98-220ENST00000533346 EFCAB8A8MWE9 144 aa9.52□□□□□ -0.89
NUP98-220ENST00000533346 GOLGA8KD6RF30 607 aa9.52□□□□□ -0.89
NUP98-220ENST00000533346 H3BMH7 237 aa9.52□□□□□ -0.89
NUP98-220ENST00000533346 GOLGA8TH3BQL2 631 aa9.52□□□□□ -0.89
NUP98-220ENST00000533346 ERVH48-1M5A8F1 160 aa9.52□□□□□ -0.89
NUP98-220ENST00000533346 RASGRF2O14827 1237 aa9.52□□□□□ -0.89
NUP98-220ENST00000533346 EIF3HO15372 352 aaKnown RBP eCLIP9.52□□□□□ -0.89
NUP98-220ENST00000533346 NIPSNAP2O75323 286 aa9.52□□□□□ -0.89
NUP98-220ENST00000533346 PSIP1O75475 530 aaKnown RBP9.52□□□□□ -0.89
NUP98-220ENST00000533346 SPAG6O75602 509 aa9.52□□□□□ -0.89
NUP98-220ENST00000533346 STK17BO94768 372 aa9.52□□□□□ -0.89
NUP98-220ENST00000533346 C1orf105O95561 183 aa9.52□□□□□ -0.89
NUP98-220ENST00000533346 ITGB2P05107 769 aa9.52□□□□□ -0.89
NUP98-220ENST00000533346 CHRM5P08912 532 aaPredicted RBP9.52□□□□□ -0.89
NUP98-220ENST00000533346 MPC1LP0DKB6 136 aa9.52□□□□□ -0.89
NUP98-220ENST00000533346 ENO3P13929 434 aaPredicted RBP9.52□□□□□ -0.89
NUP98-220ENST00000533346 CDH3P22223 829 aa9.52□□□□□ -0.89
NUP98-220ENST00000533346 FMO4P31512 558 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms