RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 CLN3Q13286 438 aa19.84■□□□□ 0.77
CCS-208ENST00000533244 DCAF12Q5T6F0 453 aa19.84■□□□□ 0.77
CCS-208ENST00000533244 ANKS6Q68DC2 871 aa19.84■□□□□ 0.77
CCS-208ENST00000533244 CNSTQ6PJW8 725 aa19.84■□□□□ 0.77
CCS-208ENST00000533244 LRRC69Q6ZNQ3 347 aa19.84■□□□□ 0.77
CCS-208ENST00000533244 KIAA0408Q6ZU52 694 aa19.84■□□□□ 0.77
CCS-208ENST00000533244 DTX1Q86Y01 620 aa19.84■□□□□ 0.77
CCS-208ENST00000533244 DCUN1D3Q8IWE4 304 aa19.84■□□□□ 0.77
CCS-208ENST00000533244 ZBTB2Q8N680 514 aa19.84■□□□□ 0.77
CCS-208ENST00000533244 GIMAP7Q8NHV1 300 aa19.84■□□□□ 0.77
CCS-208ENST00000533244 GABPB2Q8TAK5 448 aaPredicted RBP19.84■□□□□ 0.77
CCS-208ENST00000533244 CFAP36Q96G28 342 aa19.84■□□□□ 0.77
CCS-208ENST00000533244 NAF1Q96HR8 494 aaKnown RBP19.84■□□□□ 0.77
CCS-208ENST00000533244 RAB17Q9H0T7 212 aa19.84■□□□□ 0.77
CCS-208ENST00000533244 XKR8Q9H6D3 395 aa19.84■□□□□ 0.77
CCS-208ENST00000533244 APMAPQ9HDC9 416 aa19.84■□□□□ 0.77
CCS-208ENST00000533244 UTP11Q9Y3A2 253 aaKnown RBP19.84■□□□□ 0.77
CCS-208ENST00000533244 RPN2P04844 631 aa19.83■□□□□ 0.76
CCS-208ENST00000533244 LIPCP11150 499 aa19.83■□□□□ 0.76
CCS-208ENST00000533244 ABCG1P45844 678 aa19.83■□□□□ 0.76
CCS-208ENST00000533244 SH3BP2P78314 561 aa19.83■□□□□ 0.76
CCS-208ENST00000533244 ABRQ12979 859 aa19.83■□□□□ 0.76
CCS-208ENST00000533244 KYNUQ16719 465 aa19.83■□□□□ 0.76
CCS-208ENST00000533244 TEDDM1Q5T9Z0 273 aa19.83■□□□□ 0.76
CCS-208ENST00000533244 TRMT10BQ6PF06 316 aaKnown RBP19.83■□□□□ 0.76
CCS-208ENST00000533244 CEACAM20Q6UY09 585 aa19.83■□□□□ 0.76
CCS-208ENST00000533244 ANKMY2Q8IV38 441 aa19.83■□□□□ 0.76
CCS-208ENST00000533244 FBXO36Q8NEA4 188 aa19.83■□□□□ 0.76
CCS-208ENST00000533244 ZNF592Q92610 1267 aa19.83■□□□□ 0.76
CCS-208ENST00000533244 FAM136AQ96C01 138 aa19.83■□□□□ 0.76
CCS-208ENST00000533244 SLC30A3Q99726 388 aa19.83■□□□□ 0.76
CCS-208ENST00000533244 ZPBPQ9BS86 351 aa19.83■□□□□ 0.76
CCS-208ENST00000533244 AARSD1Q9BTE6 412 aaKnown RBP19.83■□□□□ 0.76
CCS-208ENST00000533244 PITPNM3Q9BZ71 974 aa19.83■□□□□ 0.76
CCS-208ENST00000533244 SPRY4Q9C004 299 aa19.83■□□□□ 0.76
CCS-208ENST00000533244 OR6C2Q9NZP2 312 aa19.83■□□□□ 0.76
CCS-208ENST00000533244 E5RI56 91 aa19.82■□□□□ 0.76
CCS-208ENST00000533244 EIF3HO15372 352 aaKnown RBP eCLIP19.82■□□□□ 0.76
CCS-208ENST00000533244 KDM1AO60341 852 aa19.82■□□□□ 0.76
CCS-208ENST00000533244 MATN4O95460 622 aa19.82■□□□□ 0.76
CCS-208ENST00000533244 PRDX3P30048 256 aaKnown RBP19.82■□□□□ 0.76
CCS-208ENST00000533244 PKLRP30613 574 aa19.82■□□□□ 0.76
CCS-208ENST00000533244 TUBB2AQ13885 445 aa19.82■□□□□ 0.76
CCS-208ENST00000533244 ACSBG2Q5FVE4 666 aa19.82■□□□□ 0.76
CCS-208ENST00000533244 ZFAND4Q86XD8 727 aa19.82■□□□□ 0.76
CCS-208ENST00000533244 GSDMBQ8TAX9 411 aa19.82■□□□□ 0.76
CCS-208ENST00000533244 HNRNPLLQ8WVV9 542 aaKnown RBP19.82■□□□□ 0.76
CCS-208ENST00000533244 PPM1MQ96MI6 270 aa19.82■□□□□ 0.76
CCS-208ENST00000533244 TUBB2BQ9BVA1 445 aa19.82■□□□□ 0.76
CCS-208ENST00000533244 PHACTR1Q9C0D0 580 aa19.82■□□□□ 0.76
CCS-208ENST00000533244 CCDC68Q9H2F9 335 aa19.82■□□□□ 0.76
CCS-208ENST00000533244 C1GALT1Q9NS00 363 aa19.82■□□□□ 0.76
CCS-208ENST00000533244 ACTR10Q9NZ32 417 aa19.82■□□□□ 0.76
CCS-208ENST00000533244 BTRCQ9Y297 605 aa19.82■□□□□ 0.76
CCS-208ENST00000533244 TDRKHQ9Y2W6 561 aaKnown RBP19.82■□□□□ 0.76
CCS-208ENST00000533244 NFS1Q9Y697 457 aa19.82■□□□□ 0.76
CCS-208ENST00000533244 GSAPA4D1B5 854 aa19.81■□□□□ 0.76
CCS-208ENST00000533244 C2orf74A8MZ97 194 aa19.81■□□□□ 0.76
CCS-208ENST00000533244 POLR1CO15160 346 aaPredicted RBP19.81■□□□□ 0.76
CCS-208ENST00000533244 KLK10O43240 276 aa19.81■□□□□ 0.76
CCS-208ENST00000533244 C1orf105O95561 183 aa19.81■□□□□ 0.76
CCS-208ENST00000533244 ZBTB11O95625 1053 aaPredicted RBP19.81■□□□□ 0.76
CCS-208ENST00000533244 CARSP49589 748 aaKnown RBP19.81■□□□□ 0.76
CCS-208ENST00000533244 ZDHHC24Q6UX98 284 aa19.81■□□□□ 0.76
CCS-208ENST00000533244 D2HGDHQ8N465 521 aa19.81■□□□□ 0.76
CCS-208ENST00000533244 CFAP61Q8NHU2 1237 aa19.81■□□□□ 0.76
CCS-208ENST00000533244 FLVCR1-AS1Q8TAF5 88 aa19.81■□□□□ 0.76
CCS-208ENST00000533244 SEC14L1Q92503 715 aa19.81■□□□□ 0.76
CCS-208ENST00000533244 CTRCQ99895 268 aa19.81■□□□□ 0.76
CCS-208ENST00000533244 MOCS1Q9NZB8 636 aa19.81■□□□□ 0.76
CCS-208ENST00000533244 SLC17A6Q9P2U8 582 aa19.81■□□□□ 0.76
CCS-208ENST00000533244 PLAGL1Q9UM63 463 aa19.81■□□□□ 0.76
CCS-208ENST00000533244 DHRS7Q9Y394 339 aa19.81■□□□□ 0.76
CCS-208ENST00000533244 STMND1H3BQB6 276 aa19.8■□□□□ 0.76
CCS-208ENST00000533244 KRT37O76014 449 aa19.8■□□□□ 0.76
CCS-208ENST00000533244 AHSGP02765 367 aa19.8■□□□□ 0.76
CCS-208ENST00000533244 CHRM5P08912 532 aaPredicted RBP19.8■□□□□ 0.76
CCS-208ENST00000533244 FGF5P12034 268 aa19.8■□□□□ 0.76
CCS-208ENST00000533244 RAB28P51157 221 aa19.8■□□□□ 0.76
CCS-208ENST00000533244 HSD11B2P80365 405 aa19.8■□□□□ 0.76
CCS-208ENST00000533244 TIAL1Q01085 375 aaKnown RBP eCLIP19.8■□□□□ 0.76
CCS-208ENST00000533244 CAV1Q03135 178 aa19.8■□□□□ 0.76
CCS-208ENST00000533244 IL11RAQ14626 422 aa19.8■□□□□ 0.76
CCS-208ENST00000533244 TRADDQ15628 312 aa19.8■□□□□ 0.76
CCS-208ENST00000533244 COL28A1Q2UY09 1125 aa19.8■□□□□ 0.76
CCS-208ENST00000533244 TTLL9Q3SXZ7 439 aa19.8■□□□□ 0.76
CCS-208ENST00000533244 C8orf74Q6P047 294 aa19.8■□□□□ 0.76
CCS-208ENST00000533244 FBXO38Q6PIJ6 1188 aa19.8■□□□□ 0.76
CCS-208ENST00000533244 NEK10Q6ZWH5 1172 aa19.8■□□□□ 0.76
CCS-208ENST00000533244 ZBED8Q8IZ13 594 aa19.8■□□□□ 0.76
CCS-208ENST00000533244 MMGT1Q8N4V1 131 aa19.8■□□□□ 0.76
CCS-208ENST00000533244 SIDT2Q8NBJ9 832 aaKnown RBP19.8■□□□□ 0.76
CCS-208ENST00000533244 FBXO25Q8TCJ0 367 aa19.8■□□□□ 0.76
CCS-208ENST00000533244 CD200R1Q8TD46 325 aa19.8■□□□□ 0.76
CCS-208ENST00000533244 OR6C1Q96RD1 312 aa19.8■□□□□ 0.76
CCS-208ENST00000533244 LRRC1Q9BTT6 524 aa19.8■□□□□ 0.76
CCS-208ENST00000533244 RUVBL2Q9Y230 463 aaKnown RBP19.8■□□□□ 0.76
CCS-208ENST00000533244 PCDHB11Q9Y5F2 797 aa19.8■□□□□ 0.76
CCS-208ENST00000533244 CHD6Q8TD26 2715 aa19.79■□□□□ 0.76
CCS-208ENST00000533244 PIPSLA2A3N6 862 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms