RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 FAM95CA0A1B0GW59 222 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 KRT87PA6NCN2 255 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 A8MU76 341 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 C1QTNF9BB2RNN3 333 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 AGRPO00253 132 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 EIF3FO00303 357 aaPredicted RBP11.63□□□□□ -0.55
SSBP3-214ENST00000533209 BTN3A1O00481 513 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 PLD2O14939 933 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 HGSO14964 777 aaPredicted RBP11.63□□□□□ -0.55
SSBP3-214ENST00000533209 PSIP1O75475 530 aaKnown RBP11.63□□□□□ -0.55
SSBP3-214ENST00000533209 CAPNS1P04632 268 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 ANKRD34CP0C6C1 535 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 FAM153BP0C7A2 387 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 C1QTNF9P0C862 333 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 MYBL2P10244 700 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 ENO3P13929 434 aaPredicted RBP11.63□□□□□ -0.55
SSBP3-214ENST00000533209 PKLRP30613 574 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 GP5P40197 560 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 CCNFP41002 786 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 BDKRB1P46663 353 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 LSSP48449 732 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 GABREP78334 506 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 ILF2Q12905 390 aaKnown RBP11.63□□□□□ -0.55
SSBP3-214ENST00000533209 EIF3IQ13347 325 aaKnown RBP11.63□□□□□ -0.55
SSBP3-214ENST00000533209 NAB1Q13506 487 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 FAM153CQ494X1 144 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 CCSMST1Q4G0I0 132 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 C3orf38Q5JPI3 329 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 UNQ6494/PRO21346Q6UXR6 183 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 PIWIL4Q7Z3Z4 852 aaKnown RBP11.63□□□□□ -0.55
SSBP3-214ENST00000533209 PRSS42Q7Z5A4 293 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 AMIGO1Q86WK6 493 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 CTAGE3PQ8IX95 158 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 PPM1NQ8N819 430 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 EIF1ADQ8N9N8 165 aaKnown RBP11.63□□□□□ -0.55
SSBP3-214ENST00000533209 EEF1AKMT1Q8WVE0 214 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 ASB11Q8WXH4 323 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 NXPE2Q96DL1 559 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 ZDHHC12Q96GR4 267 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 VPS39Q96JC1 886 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 ELMO2Q96JJ3 720 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 FOPNLQ96NB1 174 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 RBBP8Q99708 897 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 ACSS3Q9H6R3 686 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 ANKZF1Q9H8Y5 726 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 KLHL3Q9UH77 587 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 CIDEBQ9UHD4 219 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 MTO1Q9Y2Z2 717 aaKnown RBP11.63□□□□□ -0.55
SSBP3-214ENST00000533209 LOXL2Q9Y4K0 774 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 ACACBO00763 2458 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 IGF2RP11717 2491 aa11.63□□□□□ -0.55
SSBP3-214ENST00000533209 ARHGEF33A8MVX0 844 aa11.62□□□□□ -0.55
SSBP3-214ENST00000533209 GFYI3L273 518 aa11.62□□□□□ -0.55
SSBP3-214ENST00000533209 RASGRF2O14827 1237 aa11.62□□□□□ -0.55
SSBP3-214ENST00000533209 TOX3O15405 576 aaPredicted RBP11.62□□□□□ -0.55
SSBP3-214ENST00000533209 KDM1AO60341 852 aa11.62□□□□□ -0.55
SSBP3-214ENST00000533209 FAM155BO75949 473 aa11.62□□□□□ -0.55
SSBP3-214ENST00000533209 SLU7O95391 586 aaKnown RBP11.62□□□□□ -0.55
SSBP3-214ENST00000533209 ACSL3O95573 720 aa11.62□□□□□ -0.55
SSBP3-214ENST00000533209 TSPAN12O95859 305 aa11.62□□□□□ -0.55
SSBP3-214ENST00000533209 HGFP14210 728 aa11.62□□□□□ -0.55
SSBP3-214ENST00000533209 TNFRSF8P28908 595 aa11.62□□□□□ -0.55
SSBP3-214ENST00000533209 SHMT2P34897 504 aa11.62□□□□□ -0.55
SSBP3-214ENST00000533209 PHBP35232 272 aa11.62□□□□□ -0.55
SSBP3-214ENST00000533209 KPNA2P52292 529 aaKnown RBP11.62□□□□□ -0.55
SSBP3-214ENST00000533209 TAS2R39P59534 338 aa11.62□□□□□ -0.55
SSBP3-214ENST00000533209 CYP4F3Q08477 520 aa11.62□□□□□ -0.55
SSBP3-214ENST00000533209 PDAP1Q13442 181 aaKnown RBP11.62□□□□□ -0.55
SSBP3-214ENST00000533209 SLMAPQ14BN4 828 aa11.62□□□□□ -0.55
SSBP3-214ENST00000533209 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.62□□□□□ -0.55
SSBP3-214ENST00000533209 CACHD1Q5VU97 1274 aa11.62□□□□□ -0.55
SSBP3-214ENST00000533209 ARMC6Q6NXE6 501 aa11.62□□□□□ -0.55
SSBP3-214ENST00000533209 TTC23LQ6PF05 361 aa11.62□□□□□ -0.55
SSBP3-214ENST00000533209 TMEM207Q6UWW9 146 aa11.62□□□□□ -0.55
SSBP3-214ENST00000533209 FAM92BQ6ZTR7 304 aa11.62□□□□□ -0.55
SSBP3-214ENST00000533209 CEP97Q8IW35 865 aa11.62□□□□□ -0.55
SSBP3-214ENST00000533209 GSPT2Q8IYD1 628 aaKnown RBP11.62□□□□□ -0.55
SSBP3-214ENST00000533209 FBXO39Q8N4B4 442 aa11.62□□□□□ -0.55
SSBP3-214ENST00000533209 LINC01555Q8NAE3 123 aa11.62□□□□□ -0.55
SSBP3-214ENST00000533209 AGBL5Q8NDL9 886 aa11.62□□□□□ -0.55
SSBP3-214ENST00000533209 RAD51AP1Q96B01 352 aa11.62□□□□□ -0.55
SSBP3-214ENST00000533209 LINGO1Q96FE5 620 aa11.62□□□□□ -0.55
SSBP3-214ENST00000533209 IL17FQ96PD4 163 aa11.62□□□□□ -0.55
SSBP3-214ENST00000533209 CYTH2Q99418 400 aa11.62□□□□□ -0.55
SSBP3-214ENST00000533209 GPR22Q99680 433 aa11.62□□□□□ -0.55
SSBP3-214ENST00000533209 MAP3K3Q99759 626 aa11.62□□□□□ -0.55
SSBP3-214ENST00000533209 CMKLR1Q99788 373 aa11.62□□□□□ -0.55
SSBP3-214ENST00000533209 TXLNGYQ9BZA5 131 aa11.62□□□□□ -0.55
SSBP3-214ENST00000533209 SPHK1Q9NYA1 384 aa11.62□□□□□ -0.55
SSBP3-214ENST00000533209 OR6C2Q9NZP2 312 aa11.62□□□□□ -0.55
SSBP3-214ENST00000533209 SEMA5BQ9P283 1151 aa11.62□□□□□ -0.55
SSBP3-214ENST00000533209 TXNDC16Q9P2K2 825 aa11.62□□□□□ -0.55
SSBP3-214ENST00000533209 POMT2Q9UKY4 750 aa11.62□□□□□ -0.55
SSBP3-214ENST00000533209 PCDHGA8Q9Y5G5 932 aa11.62□□□□□ -0.55
SSBP3-214ENST00000533209 TPRP12270 2363 aaKnown RBP11.62□□□□□ -0.55
SSBP3-214ENST00000533209 IGHV5-51A0A0C4DH38 117 aa11.61□□□□□ -0.55
SSBP3-214ENST00000533209 TLCD2A6NGC4 264 aa11.61□□□□□ -0.55
SSBP3-214ENST00000533209 MYO1CO00159 1063 aa11.61□□□□□ -0.55
SSBP3-214ENST00000533209 MATN2O00339 956 aa11.61□□□□□ -0.55
SSBP3-214ENST00000533209 BRINP1O60477 761 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms