RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 HGH1Q9BTY7 390 aa10.93□□□□□ -0.66
TRAPPC4-211ENST00000533012 SRMSQ9H3Y6 488 aa10.93□□□□□ -0.66
TRAPPC4-211ENST00000533012 SYNDIG1Q9H7V2 258 aa10.93□□□□□ -0.66
TRAPPC4-211ENST00000533012 HRASLS2Q9NWW9 162 aa10.93□□□□□ -0.66
TRAPPC4-211ENST00000533012 PSMC3IPQ9P2W1 217 aaPredicted RBP10.93□□□□□ -0.66
TRAPPC4-211ENST00000533012 LNPEPQ9UIQ6 1025 aa10.93□□□□□ -0.66
TRAPPC4-211ENST00000533012 RUVBL2Q9Y230 463 aaKnown RBP10.93□□□□□ -0.66
TRAPPC4-211ENST00000533012 ACOT9Q9Y305 439 aa10.93□□□□□ -0.66
TRAPPC4-211ENST00000533012 TP53BP1Q12888 1972 aaPredicted RBP10.93□□□□□ -0.66
TRAPPC4-211ENST00000533012 COL5A1P20908 1838 aaPredicted RBP10.93□□□□□ -0.66
TRAPPC4-211ENST00000533012 ASCC3Q8N3C0 2202 aaKnown RBP10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 A0A087X1B8 175 aa10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 A0A1W2PQM1 296 aa10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 FAM221BA6H8Z2 402 aa10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 PABPN1LA6NDY0 278 aaKnown RBP10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 NTN3O00634 580 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 TCEA3O75764 348 aa10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 CPNE6O95741 557 aa10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 TSPAN12O95859 305 aa10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 C2P06681 752 aa10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 PROS1P07225 676 aa10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 NUDT17P0C025 328 aa10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 HIST1H2AGP0C0S8 130 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 CCDC166P0CW27 439 aa10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 HIST1H2ADP20671 130 aa10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 CYP2A7P20853 494 aa10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 GCAP28676 217 aa10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 SHMT2P34897 504 aa10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 SLC26A3P40879 764 aa10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 ATP6V0D1P61421 351 aa10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 INSM1Q01101 510 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 PRKAA1Q13131 559 aa10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 ARMC6Q6NXE6 501 aa10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 UBE2R2Q712K3 238 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 DGLUCYQ7Z3D6 616 aa10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 CMC1Q7Z7K0 106 aa10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 TBC1D1Q86TI0 1168 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 TDRPQ86YL5 185 aa10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 PLXDC1Q8IUK5 500 aa10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 FBXO15Q8NCQ5 510 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 OR9A1PQ8NGU1 263 aa10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 ANKRD49Q8WVL7 239 aa10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 JPH3Q8WXH2 748 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 ADAMTS14Q8WXS8 1223 aa10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 NCSTNQ92542 709 aa10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 HIST1H2AHQ96KK5 128 aa10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 HIST1H2AJQ99878 128 aa10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 DPYSL5Q9BPU6 564 aa10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 H2AFJQ9BTM1 129 aa10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 SLC12A9Q9BXP2 914 aa10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 TRIM54Q9BYV2 358 aa10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 ROPN1BQ9BZX4 212 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 DERL2Q9GZP9 239 aa10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 ZMYND15Q9H091 742 aa10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 VIPAS39Q9H9C1 493 aa10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 ROPN1Q9HAT0 212 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 SNX15Q9NRS6 342 aa10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 PIEZO1Q92508 2521 aa10.92□□□□□ -0.66
TRAPPC4-211ENST00000533012 A0A096LPK6 155 aa10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 TLDC2A0PJX2 215 aa10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 OR6C74A6NCV1 312 aa10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 SMIM23A6NLE4 172 aa10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 TRIM49D1C9J1S8 452 aa10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 TMX2-CTNND1H3BSU7 103 aa10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 RASGRF2O14827 1237 aa10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 WISP3O95389 354 aaPredicted RBP10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 SYF2O95926 243 aaKnown RBP10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 MT-CO3P00414 261 aa10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 ALDOAP04075 364 aaKnown RBP10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 MPOP05164 745 aa10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 SLC35E2BP0CK96 405 aa10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 JUPP14923 745 aa10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 HSD17B2P37059 387 aa10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 BDKRB1P46663 353 aa10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 SLCO1A2P46721 670 aa10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 RAB28P51157 221 aa10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 SP140Q13342 867 aa10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 RASA2Q15283 850 aa10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 TAF1BQ53T94 588 aaPredicted RBP10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 HSP90B2PQ58FF3 399 aa10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 N4BP2L1Q5TBK1 243 aaPredicted RBP10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 TMEM71Q6P5X7 295 aa10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 WDR74Q6RFH5 385 aaPredicted RBP10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 TIFABQ6ZNK6 161 aa10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 RBM44Q6ZP01 1051 aaKnown RBP10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 OOSP2Q86WS3 158 aa10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 TMPRSS12Q86WS5 348 aa10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 GALNT15Q8N3T1 639 aa10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 OR2W6PQ8NHA6 318 aa10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 ZDHHC12Q96GR4 267 aa10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 UBXN10Q96LJ8 280 aa10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 PKP4Q99569 1192 aa10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 RAB11FIP5Q9BXF6 653 aa10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 VPS11Q9H270 941 aa10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 XKR8Q9H6D3 395 aa10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 RDH14Q9HBH5 336 aa10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 PARVBQ9HBI1 364 aa10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 NMRAL1Q9HBL8 299 aa10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 OR6C2Q9NZP2 312 aa10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 CTNNAL1Q9UBT7 734 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms