RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 SLC30A3Q99726 388 aa20.2■□□□□ 0.82
CCS-207ENST00000531990 PCDHGA8Q9Y5G5 932 aa20.2■□□□□ 0.82
CCS-207ENST00000531990 AKAP13Q12802 2813 aa20.2■□□□□ 0.82
CCS-207ENST00000531990 FAM95CA0A1B0GW59 222 aa20.19■□□□□ 0.82
CCS-207ENST00000531990 PIAS1O75925 651 aa20.19■□□□□ 0.82
CCS-207ENST00000531990 MATN4O95460 622 aa20.19■□□□□ 0.82
CCS-207ENST00000531990 MPC1LP0DKB6 136 aa20.19■□□□□ 0.82
CCS-207ENST00000531990 POLR2CP19387 275 aaPredicted RBP20.19■□□□□ 0.82
CCS-207ENST00000531990 MCM3P25205 808 aa20.19■□□□□ 0.82
CCS-207ENST00000531990 CDKN2DP55273 166 aa20.19■□□□□ 0.82
CCS-207ENST00000531990 TUBB4BP68371 445 aa20.19■□□□□ 0.82
CCS-207ENST00000531990 NAB1Q13506 487 aa20.19■□□□□ 0.82
CCS-207ENST00000531990 KBTBD12Q3ZCT8 623 aa20.19■□□□□ 0.82
CCS-207ENST00000531990 CACHD1Q5VU97 1274 aa20.19■□□□□ 0.82
CCS-207ENST00000531990 FAM92BQ6ZTR7 304 aa20.19■□□□□ 0.82
CCS-207ENST00000531990 ARHGAP22Q7Z5H3 698 aa20.19■□□□□ 0.82
CCS-207ENST00000531990 CPNE9Q8IYJ1 553 aa20.19■□□□□ 0.82
CCS-207ENST00000531990 PPM1NQ8N819 430 aa20.19■□□□□ 0.82
CCS-207ENST00000531990 VPS39Q96JC1 886 aa20.19■□□□□ 0.82
CCS-207ENST00000531990 RAB11FIP5Q9BXF6 653 aa20.19■□□□□ 0.82
CCS-207ENST00000531990 XKR8Q9H6D3 395 aa20.19■□□□□ 0.82
CCS-207ENST00000531990 CCDC86Q9H6F5 360 aaKnown RBP20.19■□□□□ 0.82
CCS-207ENST00000531990 NINJ2Q9NZG7 142 aa20.19■□□□□ 0.82
CCS-207ENST00000531990 SLC39A10Q9ULF5 831 aa20.19■□□□□ 0.82
CCS-207ENST00000531990 ICKQ9UPZ9 632 aa20.19■□□□□ 0.82
CCS-207ENST00000531990 RUVBL2Q9Y230 463 aaKnown RBP20.19■□□□□ 0.82
CCS-207ENST00000531990 NFS1Q9Y697 457 aa20.19■□□□□ 0.82
CCS-207ENST00000531990 CHD8Q9HCK8 2581 aa20.19■□□□□ 0.82
CCS-207ENST00000531990 GSAPA4D1B5 854 aa20.18■□□□□ 0.82
CCS-207ENST00000531990 CXorf49A8MYA2 514 aaPredicted RBP20.18■□□□□ 0.82
CCS-207ENST00000531990 C1QTNF9BB2RNN3 333 aa20.18■□□□□ 0.82
CCS-207ENST00000531990 C1orf105O95561 183 aa20.18■□□□□ 0.82
CCS-207ENST00000531990 CATP04040 527 aaKnown RBP20.18■□□□□ 0.82
CCS-207ENST00000531990 ANKRD34CP0C6C1 535 aa20.18■□□□□ 0.82
CCS-207ENST00000531990 C1QTNF9P0C862 333 aa20.18■□□□□ 0.82
CCS-207ENST00000531990 SAT1P21673 171 aa20.18■□□□□ 0.82
CCS-207ENST00000531990 FDXRP22570 491 aa20.18■□□□□ 0.82
CCS-207ENST00000531990 GP5P40197 560 aa20.18■□□□□ 0.82
CCS-207ENST00000531990 MLLT3P42568 568 aaPredicted RBP20.18■□□□□ 0.82
CCS-207ENST00000531990 RAB28P51157 221 aa20.18■□□□□ 0.82
CCS-207ENST00000531990 SLC12A2P55011 1212 aa20.18■□□□□ 0.82
CCS-207ENST00000531990 CYP4F3Q08477 520 aa20.18■□□□□ 0.82
CCS-207ENST00000531990 PRSS42Q7Z5A4 293 aa20.18■□□□□ 0.82
CCS-207ENST00000531990 UBXN4Q92575 508 aa20.18■□□□□ 0.82
CCS-207ENST00000531990 TMEM121BQ9BXQ6 578 aaPredicted RBP20.18■□□□□ 0.82
CCS-207ENST00000531990 CDC42EP4Q9H3Q1 356 aaKnown RBP20.18■□□□□ 0.82
CCS-207ENST00000531990 OR6C2Q9NZP2 312 aa20.18■□□□□ 0.82
CCS-207ENST00000531990 PISDQ9UG56 409 aa20.18■□□□□ 0.82
CCS-207ENST00000531990 PLAGL1Q9UM63 463 aa20.18■□□□□ 0.82
CCS-207ENST00000531990 TMEM8BA6NDV4 472 aa20.17■□□□□ 0.82
CCS-207ENST00000531990 TLCD2A6NGC4 264 aa20.17■□□□□ 0.82
CCS-207ENST00000531990 C2orf74A8MZ97 194 aa20.17■□□□□ 0.82
CCS-207ENST00000531990 TNFSF15O95150 251 aa20.17■□□□□ 0.82
CCS-207ENST00000531990 SLU7O95391 586 aaKnown RBP20.17■□□□□ 0.82
CCS-207ENST00000531990 HGFP14210 728 aa20.17■□□□□ 0.82
CCS-207ENST00000531990 MAP4P27816 1152 aaKnown RBP20.17■□□□□ 0.82
CCS-207ENST00000531990 BDKRB1P46663 353 aa20.17■□□□□ 0.82
CCS-207ENST00000531990 PPP1CAP62136 330 aa20.17■□□□□ 0.82
CCS-207ENST00000531990 PAQR3Q6TCH7 311 aa20.17■□□□□ 0.82
CCS-207ENST00000531990 MYO1HQ8N1T3 1032 aa20.17■□□□□ 0.82
CCS-207ENST00000531990 CYTH2Q99418 400 aa20.17■□□□□ 0.82
CCS-207ENST00000531990 RBBP8Q99708 897 aa20.17■□□□□ 0.82
CCS-207ENST00000531990 SPEGQ15772 3267 aa20.16■□□□□ 0.82
CCS-207ENST00000531990 A0A1W2PNU3 283 aaPredicted RBP20.16■□□□□ 0.82
CCS-207ENST00000531990 PIPSLA2A3N6 862 aa20.16■□□□□ 0.82
CCS-207ENST00000531990 BTN3A3O00478 584 aa20.16■□□□□ 0.82
CCS-207ENST00000531990 BTN3A1O00481 513 aa20.16■□□□□ 0.82
CCS-207ENST00000531990 ZBTB14O43829 449 aa20.16■□□□□ 0.82
CCS-207ENST00000531990 BRINP1O60477 761 aa20.16■□□□□ 0.82
CCS-207ENST00000531990 PSIP1O75475 530 aaKnown RBP20.16■□□□□ 0.82
CCS-207ENST00000531990 ACSL3O95573 720 aa20.16■□□□□ 0.82
CCS-207ENST00000531990 C1QAP02745 245 aa20.16■□□□□ 0.82
CCS-207ENST00000531990 ITGA2BP08514 1039 aa20.16■□□□□ 0.82
CCS-207ENST00000531990 SPRP35270 261 aaPredicted RBP20.16■□□□□ 0.82
CCS-207ENST00000531990 ARL4DP49703 201 aa20.16■□□□□ 0.82
CCS-207ENST00000531990 MAPK10P53779 464 aa20.16■□□□□ 0.82
CCS-207ENST00000531990 IL2P60568 153 aa20.16■□□□□ 0.82
CCS-207ENST00000531990 TIAL1Q01085 375 aaKnown RBP eCLIP20.16■□□□□ 0.82
CCS-207ENST00000531990 GRTP1Q5TC63 336 aa20.16■□□□□ 0.82
CCS-207ENST00000531990 IGF2-ASQ6U949 168 aa20.16■□□□□ 0.82
CCS-207ENST00000531990 PIWIL4Q7Z3Z4 852 aaKnown RBP20.16■□□□□ 0.82
CCS-207ENST00000531990 FAM129CQ86XR2 697 aa20.16■□□□□ 0.82
CCS-207ENST00000531990 ADGRF3Q8IZF5 1079 aa20.16■□□□□ 0.82
CCS-207ENST00000531990 CARFQ8N187 725 aa20.16■□□□□ 0.82
CCS-207ENST00000531990 MDM1Q8TC05 714 aa20.16■□□□□ 0.82
CCS-207ENST00000531990 EEF1AKMT1Q8WVE0 214 aa20.16■□□□□ 0.82
CCS-207ENST00000531990 LINGO1Q96FE5 620 aa20.16■□□□□ 0.82
CCS-207ENST00000531990 TSPAN17Q96FV3 270 aa20.16■□□□□ 0.82
CCS-207ENST00000531990 OLFM1Q99784 485 aa20.16■□□□□ 0.82
CCS-207ENST00000531990 THSD1Q9NS62 852 aa20.16■□□□□ 0.82
CCS-207ENST00000531990 DKK4Q9UBT3 224 aa20.16■□□□□ 0.82
CCS-207ENST00000531990 CIDEBQ9UHD4 219 aa20.16■□□□□ 0.82
CCS-207ENST00000531990 LNPEPQ9UIQ6 1025 aa20.16■□□□□ 0.82
CCS-207ENST00000531990 POMT2Q9UKY4 750 aa20.16■□□□□ 0.82
CCS-207ENST00000531990 EFCAB7A8K855 629 aa20.15■□□□□ 0.82
CCS-207ENST00000531990 RASGRF2O14827 1237 aa20.15■□□□□ 0.82
CCS-207ENST00000531990 KIF1CO43896 1103 aaKnown RBP20.15■□□□□ 0.82
CCS-207ENST00000531990 DXOO77932 396 aaKnown RBP20.15■□□□□ 0.82
CCS-207ENST00000531990 CHRM5P08912 532 aaPredicted RBP20.15■□□□□ 0.82
CCS-207ENST00000531990 TPBGLP0DKB5 382 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms