RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	HNRNPA2B1	P22626	353 aa	Known RBP	5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	ARL3	P36405	182 aa		5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	ETV5	P41161	510 aa		5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	MSH2	P43246	934 aa		5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	SLC6A9	P48067	706 aa		5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	CARS	P49589	748 aa	Known RBP	5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	NDST1	P52848	882 aa		5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	CNTN1	Q12860	1018 aa		5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	SNRNP35	Q16560	246 aa	Known RBP	5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	ZNF284	Q2VY69	593 aa		5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	POM121L1P	Q3SYA9	428 aa		5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	SPDYE7P	Q495Y7	208 aa		5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	PIP5KL1	Q5T9C9	394 aa		5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	METRNL	Q641Q3	311 aa		5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	PLBD1	Q6P4A8	553 aa		5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	CRTC1	Q6UUV9	634 aa		5.69	□□□□□ -1.5
PUM1-222	ENST00000531867		Q6ZSR6	202 aa		5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	BBS12	Q6ZW61	710 aa		5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	BHLHA9	Q7RTU4	235 aa		5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	HORMAD1	Q86X24	394 aa		5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	ARMC8	Q8IUR7	673 aa		5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	SLC35F3	Q8IY50	421 aa		5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	SYCP3	Q8IZU3	236 aa		5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	ARHGAP18	Q8N392	663 aa		5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	OR8H1	Q8NGG4	311 aa		5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	OR56A1	Q8NGH5	318 aa		5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	AZIN2	Q96A70	460 aa		5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	FEM1C	Q96JP0	617 aa		5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	AGAP2	Q99490	1192 aa		5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	DUSP16	Q9BY84	665 aa		5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	TRIM54	Q9BYV2	358 aa		5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	EDEM3	Q9BZQ6	932 aa		5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	STRADB	Q9C0K7	418 aa		5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	SERHL2	Q9H4I8	314 aa		5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	LDAH	Q9H6V9	325 aa		5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	ZNF71	Q9NQZ8	489 aa	Predicted RBP	5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	FAM49B	Q9NUQ9	324 aa		5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	TBC1D7	Q9P0N9	293 aa		5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	DKK2	Q9UBU2	259 aa		5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	HMGXB4	Q9UGU5	601 aa		5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	RPS6KA6	Q9UK32	745 aa		5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	PACSIN3	Q9UKS6	424 aa		5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	C19orf53	Q9UNZ5	99 aa	Predicted RBP	5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	CELSR2	Q9HCU4	2923 aa		5.69	□□□□□ -1.5
PUM1-222	ENST00000531867	MED13L	Q71F56	2210 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	OTOG	Q6ZRI0	2925 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	hCG_1807616	A0A1W2PRN6	198 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	CCDC78	A2IDD5	438 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	LMO7DN	F2Z398	122 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	ALOX15B	O15296	676 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	SLC31A1	O15431	190 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	STX6	O43752	255 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	TBL1X	O60907	577 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	GCAT	O75600	419 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	ACTL6B	O94805	426 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	VNN1	O95497	513 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	KRT7	P08729	469 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	DLAT	P10515	647 aa	Known RBP	5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	ITIH1	P19827	911 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	IL11	P20809	199 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	GNLY	P22749	145 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	ADORA2B	P29275	332 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	ATP5D	P30049	168 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	AKT2	P31751	481 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	PTTG1IP	P53801	180 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	MLLT10	P55197	1068 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	CLDN2	P57739	230 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	YWHAG	P61981	247 aa	Known RBP eCLIP	5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	ECT2L	Q008S8	904 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	CYP24A1	Q07973	514 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	INCA1	Q0VD86	236 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	EIF2B5	Q13144	721 aa	Known RBP	5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	MTM1	Q13496	603 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	DEFB133	Q30KQ1	61 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	ZNF699	Q32M78	642 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	ZNF542P	Q5EBM4	170 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	FSCB	Q5H9T9	825 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	ZNF667	Q5HYK9	610 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	FAM46C	Q5VWP2	391 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	NAA35	Q5VZE5	725 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	ZNF529	Q6P280	563 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	KYAT3	Q6YP21	454 aa	Known RBP	5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	MED25	Q71SY5	747 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	CCDC91	Q7Z6B0	441 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	PARG	Q86W56	976 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	MFN1	Q8IWA4	741 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	SRRM1	Q8IYB3	904 aa	Known RBP	5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	MGARP	Q8TDB4	240 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	CREB3L4	Q8TEY5	395 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	LRRC46	Q96FV0	321 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	TWNK	Q96RR1	684 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	NEU1	Q99519	415 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	CALN1	Q9BXU9	219 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	TOR3A	Q9H497	397 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	NOD2	Q9HC29	1040 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	EPB41L5	Q9HCM4	733 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	DONSON	Q9NYP3	566 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	ZNF212	Q9UDV6	495 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	PISD	Q9UG56	409 aa		5.68	□□□□□ -1.5
PUM1-222	ENST00000531867	LOXL2	Q9Y4K0	774 aa		5.68	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 41 ms