RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 PITPNM3Q9BZ71 974 aa8.91□□□□□ -0.98
NEDD8-206ENST00000531430 TFB2MQ9H5Q4 396 aaKnown RBP8.91□□□□□ -0.98
NEDD8-206ENST00000531430 SOX17Q9H6I2 414 aaPredicted RBP8.91□□□□□ -0.98
NEDD8-206ENST00000531430 MVB12BQ9H7P6 319 aa8.91□□□□□ -0.98
NEDD8-206ENST00000531430 COG4Q9H9E3 785 aa8.91□□□□□ -0.98
NEDD8-206ENST00000531430 OLAHQ9NV23 265 aa8.91□□□□□ -0.98
NEDD8-206ENST00000531430 PLA2G3Q9NZ20 509 aa8.91□□□□□ -0.98
NEDD8-206ENST00000531430 SUCOQ9UBS9 1254 aaKnown RBP8.91□□□□□ -0.98
NEDD8-206ENST00000531430 PLAGL1Q9UM63 463 aa8.91□□□□□ -0.98
NEDD8-206ENST00000531430 KLHL20Q9Y2M5 609 aa8.91□□□□□ -0.98
NEDD8-206ENST00000531430 LUC7L2Q9Y383 392 aaKnown RBP8.91□□□□□ -0.98
NEDD8-206ENST00000531430 HYOU1Q9Y4L1 999 aa8.91□□□□□ -0.98
NEDD8-206ENST00000531430 FER1L5A0AVI2 2057 aa8.91□□□□□ -0.98
NEDD8-206ENST00000531430 CCL21O00585 134 aa8.9□□□□□ -0.98
NEDD8-206ENST00000531430 CCL22O00626 93 aa8.9□□□□□ -0.98
NEDD8-206ENST00000531430 CST8O60676 142 aa8.9□□□□□ -0.98
NEDD8-206ENST00000531430 F10P00742 488 aa8.9□□□□□ -0.98
NEDD8-206ENST00000531430 PIM1P11309 404 aaPredicted RBP8.9□□□□□ -0.98
NEDD8-206ENST00000531430 COX6B1P14854 86 aa8.9□□□□□ -0.98
NEDD8-206ENST00000531430 HTR1EP28566 365 aa8.9□□□□□ -0.98
NEDD8-206ENST00000531430 ARHGAP25P42331 645 aa8.9□□□□□ -0.98
NEDD8-206ENST00000531430 TSFMP43897 325 aaKnown RBP8.9□□□□□ -0.98
NEDD8-206ENST00000531430 CDKN1CP49918 316 aaPredicted RBP8.9□□□□□ -0.98
NEDD8-206ENST00000531430 ZBED6P86452 979 aa8.9□□□□□ -0.98
NEDD8-206ENST00000531430 WASHC5Q12768 1159 aa8.9□□□□□ -0.98
NEDD8-206ENST00000531430 MPP3Q13368 585 aa8.9□□□□□ -0.98
NEDD8-206ENST00000531430 TAF1AQ15573 450 aaPredicted RBP8.9□□□□□ -0.98
NEDD8-206ENST00000531430 SLC14A2Q15849 920 aa8.9□□□□□ -0.98
NEDD8-206ENST00000531430 ZIC1Q15915 447 aa8.9□□□□□ -0.98
NEDD8-206ENST00000531430 RBBP7Q16576 425 aa8.9□□□□□ -0.98
NEDD8-206ENST00000531430 MFSD7Q6UXD7 560 aa8.9□□□□□ -0.98
NEDD8-206ENST00000531430 GFRALQ6UXV0 394 aa8.9□□□□□ -0.98
NEDD8-206ENST00000531430 NAPRTQ6XQN6 538 aa8.9□□□□□ -0.98
NEDD8-206ENST00000531430 MRGPRGQ86SM5 289 aa8.9□□□□□ -0.98
NEDD8-206ENST00000531430 PRSS58Q8IYP2 241 aa8.9□□□□□ -0.98
NEDD8-206ENST00000531430 ZNF567Q8N184 647 aa8.9□□□□□ -0.98
NEDD8-206ENST00000531430 METTL27Q8N6F8 245 aaPredicted RBP8.9□□□□□ -0.98
NEDD8-206ENST00000531430 BCORP1Q8N888 145 aa8.9□□□□□ -0.98
NEDD8-206ENST00000531430 OR13C4Q8NGS5 318 aa8.9□□□□□ -0.98
NEDD8-206ENST00000531430 SLC35G2Q8TBE7 412 aa8.9□□□□□ -0.98
NEDD8-206ENST00000531430 PROKR1Q8TCW9 393 aa8.9□□□□□ -0.98
NEDD8-206ENST00000531430 PPP4R1Q8TF05 950 aa8.9□□□□□ -0.98
NEDD8-206ENST00000531430 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.9□□□□□ -0.98
NEDD8-206ENST00000531430 P3H4Q92791 437 aa8.9□□□□□ -0.98
NEDD8-206ENST00000531430 LINC00615Q96LM1 132 aaPredicted RBP8.9□□□□□ -0.98
NEDD8-206ENST00000531430 OLFM3Q96PB7 478 aa8.9□□□□□ -0.98
NEDD8-206ENST00000531430 FCRL5Q96RD9 977 aa8.9□□□□□ -0.98
NEDD8-206ENST00000531430 ANP32EQ9BTT0 268 aa8.9□□□□□ -0.98
NEDD8-206ENST00000531430 YIPF2Q9BWQ6 316 aa8.9□□□□□ -0.98
NEDD8-206ENST00000531430 LHPPQ9H008 270 aa8.9□□□□□ -0.98
NEDD8-206ENST00000531430 C10orf88Q9H8K7 445 aa8.9□□□□□ -0.98
NEDD8-206ENST00000531430 SPHK1Q9NYA1 384 aa8.9□□□□□ -0.98
NEDD8-206ENST00000531430 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.9□□□□□ -0.98
NEDD8-206ENST00000531430 LCMT1Q9UIC8 334 aa8.9□□□□□ -0.98
NEDD8-206ENST00000531430 PLCL2Q9UPR0 1127 aa8.9□□□□□ -0.98
NEDD8-206ENST00000531430 ASF1AQ9Y294 204 aa8.9□□□□□ -0.98
NEDD8-206ENST00000531430 F8P00451 2351 aa8.9□□□□□ -0.99
NEDD8-206ENST00000531430 OTOGQ6ZRI0 2925 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 ANKRD12Q6UB98 2062 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 A0A0J9YY10 115 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 HEATR9A2RTY3 570 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 C3orf70A6NLC5 250 aaPredicted RBP8.89□□□□□ -0.99
NEDD8-206ENST00000531430 H7C0C1 242 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 E2F3O00716 465 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 SGTAO43765 313 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 AKR1B10O60218 316 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 KLHL18O94889 574 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 CRTAMO95727 393 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 STSP08842 583 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 CHRM5P08912 532 aaPredicted RBP8.89□□□□□ -0.99
NEDD8-206ENST00000531430 MSL3P1P0C860 447 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 PECAM1P16284 738 aaPredicted RBP8.89□□□□□ -0.99
NEDD8-206ENST00000531430 ITGALP20701 1170 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 MMP11P24347 488 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 GRIA3P42263 894 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 OR1D4P47884 311 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 ATP5OP48047 213 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 NR2C2P49116 596 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 PRLHRP49683 370 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 GEMP55040 296 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 CSE1LP55060 971 aaKnown RBP8.89□□□□□ -0.99
NEDD8-206ENST00000531430 SOX8P57073 446 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 UBASH3AP57075 661 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 TPM4P67936 248 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 FANCCQ00597 558 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 ART3Q13508 389 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 OLIG2Q13516 323 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 TFDP2Q14188 446 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 FIGNQ5HY92 759 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 CCDC181Q5TID7 509 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 MRPL14Q6P1L8 145 aaKnown RBP8.89□□□□□ -0.99
NEDD8-206ENST00000531430 KIRREL2Q6UWL6 708 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 TMEM207Q6UWW9 146 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 ISLR2Q6UXK2 745 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 MICALCLQ6ZW33 695 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 OVCH1Q7RTY7 1134 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 GDF7Q7Z4P5 450 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 MCATQ8IVS2 390 aaKnown RBP8.89□□□□□ -0.99
NEDD8-206ENST00000531430 NXPE1Q8N323 547 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 CLDN19Q8N6F1 224 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms