RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 CPT1BQ92523 772 aa8.92□□□□□ -0.98
CHMP4A-205ENST00000531158 CLIP3Q96DZ5 547 aa8.92□□□□□ -0.98
CHMP4A-205ENST00000531158 C12orf66Q96MD2 445 aa8.92□□□□□ -0.98
CHMP4A-205ENST00000531158 KLHL25Q9H0H3 589 aa8.92□□□□□ -0.98
CHMP4A-205ENST00000531158 ZNF552Q9H707 407 aaPredicted RBP8.92□□□□□ -0.98
CHMP4A-205ENST00000531158 ACTR5Q9H9F9 607 aaPredicted RBP8.92□□□□□ -0.98
CHMP4A-205ENST00000531158 SOHLH2Q9NX45 425 aa8.92□□□□□ -0.98
CHMP4A-205ENST00000531158 MAP10Q9P2G4 905 aa8.92□□□□□ -0.98
CHMP4A-205ENST00000531158 ADAM21Q9UKJ8 722 aa8.92□□□□□ -0.98
CHMP4A-205ENST00000531158 MTORP42345 2549 aa8.92□□□□□ -0.98
CHMP4A-205ENST00000531158 CACNA1CQ13936 2221 aa8.92□□□□□ -0.98
CHMP4A-205ENST00000531158 MGAT4DA6NG13 374 aa8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 GOLGA8KD6RF30 607 aa8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 CCDC188H7C350 402 aa8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 BTN3A1O00481 513 aa8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 APOL1O14791 398 aa8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 HNRNPRO43390 633 aaKnown RBP8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 MSL3P1P0C860 447 aa8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 MYBL2P10244 700 aa8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 GABRA4P48169 554 aa8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 HADHBP55084 474 aaKnown RBP8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 OLIG2Q13516 323 aa8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 PDK1Q15118 436 aa8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 TCEAL1Q15170 157 aa8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 RPS6KA1Q15418 735 aa8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 SLC1A5Q15758 541 aa8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 ZIC1Q15915 447 aa8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 PPP2R5EQ16537 467 aa8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 LDLRAP1Q5SW96 308 aa8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 IGFL3Q6UXB1 125 aa8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 CDHR3Q6ZTQ4 885 aa8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 PPP1R32Q7Z5V6 425 aa8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 CUZD1Q86UP6 607 aa8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 VSIG1Q86XK7 387 aa8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 HPS6Q86YV9 775 aa8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 IFT20Q8IY31 132 aa8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 IQCKQ8N0W5 287 aa8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 OR2L2Q8NH16 312 aa8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 ACTRT1Q8TDG2 376 aa8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 BLOC1S5Q8TDH9 187 aa8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 RNF25Q96BH1 459 aaPredicted RBP8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 TTC25Q96NG3 672 aa8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 SH3GL2Q99962 352 aa8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 LRRC1Q9BTT6 524 aa8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 SLC29A3Q9BZD2 475 aa8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 UNKQ9C0B0 810 aaKnown RBP8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 FAM60AQ9NP50 221 aa8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 C1GALT1Q9NS00 363 aa8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 UVRAGQ9P2Y5 699 aa8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 SLC5A6Q9Y289 635 aa8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 B3GNT3Q9Y2A9 372 aa8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 PCDHGA10Q9Y5H3 936 aa8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 DNMT3AQ9Y6K1 912 aaPredicted RBP8.91□□□□□ -0.98
CHMP4A-205ENST00000531158 MED13LQ71F56 2210 aa8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 ABCA2Q9BZC7 2435 aa8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 ANKUB1A6NFN9 424 aa8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 AGAP14A8MT82 685 aa8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 BHMG1C9JSJ3 638 aaPredicted RBP8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 PGRMC1O00264 195 aaKnown RBP8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 E2F3O00716 465 aa8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 PPP1R12AO14974 1030 aaPredicted RBP8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 ZNF749O43361 778 aa8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 PRAMEF1O95521 474 aa8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 SYF2O95926 243 aaKnown RBP8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 FTCDO95954 541 aa8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 KRT1P04264 644 aa8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 POLBP06746 335 aa8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 SLC35G4P0C7Q5 338 aa8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 TPBGLP0DKB5 382 aa8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 CBSLP0DN79 551 aa8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 CDH3P22223 829 aa8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 PRDX3P30048 256 aaKnown RBP8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 OTX2P32243 289 aa8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 CBSP35520 551 aa8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 PREPP48147 710 aa8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 XIAPP98170 497 aa8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 MSLNQ13421 630 aaPredicted RBP8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 MESDQ14696 234 aa8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 MYBPC3Q14896 1274 aa8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 LLGL1Q15334 1064 aa8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 TAZQ16635 292 aa8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 ZXDCQ2QGD7 858 aaPredicted RBP8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 BCL7AQ4VC05 210 aa8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 ZRANB3Q5FWF4 1079 aa8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 DCAF10Q5QP82 559 aa8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 TMTC4Q5T4D3 741 aa8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 ZFYVE27Q5T4F4 411 aa8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 VWA5B1Q5TIE3 1220 aa8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 MFSD7Q6UXD7 560 aa8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 GLT6D1Q7Z4J2 308 aa8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 MMP21Q8N119 569 aa8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 ZNF567Q8N184 647 aa8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 RASGEF1CQ8N431 466 aa8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 FLVCR1-AS1Q8TAF5 88 aa8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 ZFPM2Q8WW38 1151 aa8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 LINC00615Q96LM1 132 aaPredicted RBP8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 C5orf34Q96MH7 638 aa8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 TRAPPC9Q96Q05 1148 aa8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 SRPK1Q96SB4 655 aaKnown RBP8.9□□□□□ -0.98
CHMP4A-205ENST00000531158 ZCCHC2Q9C0B9 1178 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms