RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 SBSNQ6UWP8 590 aa5.46□□□□□ -1.54
PCF11-205ENST00000530906 IZUMO2Q6UXV1 221 aa5.46□□□□□ -1.54
PCF11-205ENST00000530906 ZNF574Q6ZN55 896 aaPredicted RBP5.46□□□□□ -1.54
PCF11-205ENST00000530906 GK5Q6ZS86 529 aa5.46□□□□□ -1.54
PCF11-205ENST00000530906 FKBP9P1Q75LS8 142 aa5.46□□□□□ -1.54
PCF11-205ENST00000530906 PDSS2Q86YH6 399 aa5.46□□□□□ -1.54
PCF11-205ENST00000530906 AQP12AQ8IXF9 295 aa5.46□□□□□ -1.54
PCF11-205ENST00000530906 CPNE9Q8IYJ1 553 aa5.46□□□□□ -1.54
PCF11-205ENST00000530906 APCDD1Q8J025 514 aa5.46□□□□□ -1.54
PCF11-205ENST00000530906 DPP10Q8N608 796 aa5.46□□□□□ -1.54
PCF11-205ENST00000530906 SIDT2Q8NBJ9 832 aaKnown RBP5.46□□□□□ -1.54
PCF11-205ENST00000530906 GLB1L3Q8NCI6 653 aaPredicted RBP5.46□□□□□ -1.54
PCF11-205ENST00000530906 ICA1LQ8NDH6 482 aa5.46□□□□□ -1.54
PCF11-205ENST00000530906 WFDC5Q8TCV5 224 aa5.46□□□□□ -1.54
PCF11-205ENST00000530906 TRPC4APQ8TEL6 797 aa5.46□□□□□ -1.54
PCF11-205ENST00000530906 DIS3LQ8TF46 1054 aaKnown RBP5.46□□□□□ -1.54
PCF11-205ENST00000530906 EEF1AKMT1Q8WVE0 214 aa5.46□□□□□ -1.54
PCF11-205ENST00000530906 NRG4Q8WWG1 115 aa5.46□□□□□ -1.54
PCF11-205ENST00000530906 AUTS2Q8WXX7 1259 aa5.46□□□□□ -1.54
PCF11-205ENST00000530906 EXT2Q93063 718 aa5.46□□□□□ -1.54
PCF11-205ENST00000530906 TRIM43Q96BQ3 446 aaPredicted RBP5.46□□□□□ -1.54
PCF11-205ENST00000530906 PAWRQ96IZ0 340 aaKnown RBP5.46□□□□□ -1.54
PCF11-205ENST00000530906 METTL2AQ96IZ6 378 aaKnown RBP5.46□□□□□ -1.54
PCF11-205ENST00000530906 LRGUKQ96M69 825 aa5.46□□□□□ -1.54
PCF11-205ENST00000530906 UHRF1Q96T88 793 aaPredicted RBP5.46□□□□□ -1.54
PCF11-205ENST00000530906 COPS8Q99627 209 aa5.46□□□□□ -1.54
PCF11-205ENST00000530906 TCF25Q9BQ70 676 aa5.46□□□□□ -1.54
PCF11-205ENST00000530906 CORO1BQ9BR76 489 aa5.46□□□□□ -1.54
PCF11-205ENST00000530906 GPATCH1Q9BRR8 931 aaKnown RBP5.46□□□□□ -1.54
PCF11-205ENST00000530906 NTMT1Q9BV86 223 aa5.46□□□□□ -1.54
PCF11-205ENST00000530906 SLC46A2Q9BY10 475 aa5.46□□□□□ -1.54
PCF11-205ENST00000530906 SHCBP1LQ9BZQ2 653 aa5.46□□□□□ -1.54
PCF11-205ENST00000530906 TM6SF2Q9BZW4 377 aa5.46□□□□□ -1.54
PCF11-205ENST00000530906 CIPCQ9C0C6 399 aa5.46□□□□□ -1.54
PCF11-205ENST00000530906 FAM192AQ9GZU8 254 aa5.46□□□□□ -1.54
PCF11-205ENST00000530906 SPHK2Q9NRA0 654 aa5.46□□□□□ -1.54
PCF11-205ENST00000530906 ADA2Q9NZK5 511 aa5.46□□□□□ -1.54
PCF11-205ENST00000530906 CCDC167Q9P0B6 97 aa5.46□□□□□ -1.54
PCF11-205ENST00000530906 TMEM181Q9P2C4 612 aa5.46□□□□□ -1.54
PCF11-205ENST00000530906 HECAQ9UBI9 543 aaPredicted RBP5.46□□□□□ -1.54
PCF11-205ENST00000530906 CD300AQ9UGN4 299 aa5.46□□□□□ -1.54
PCF11-205ENST00000530906 LEF1Q9UJU2 399 aaPredicted RBP5.46□□□□□ -1.54
PCF11-205ENST00000530906 PTBP2Q9UKA9 531 aaKnown RBP5.46□□□□□ -1.54
PCF11-205ENST00000530906 RAB26Q9ULW5 256 aa5.46□□□□□ -1.54
PCF11-205ENST00000530906 MAPRE3Q9UPY8 281 aa5.46□□□□□ -1.54
PCF11-205ENST00000530906 SLC5A6Q9Y289 635 aa5.46□□□□□ -1.54
PCF11-205ENST00000530906 PCDHGA7Q9Y5G6 932 aa5.46□□□□□ -1.54
PCF11-205ENST00000530906 GPR45Q9Y5Y3 372 aa5.46□□□□□ -1.54
PCF11-205ENST00000530906 ST14Q9Y5Y6 855 aa5.46□□□□□ -1.54
PCF11-205ENST00000530906 PTPRSQ13332 1948 aa5.46□□□□□ -1.54
PCF11-205ENST00000530906 NUP210Q8TEM1 1887 aaPredicted RBP5.45□□□□□ -1.54
PCF11-205ENST00000530906 TCRBV3S1A0A5B6 114 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 H3BNX3 289 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 K7EPI3 171 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 K7ERQ8 282 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 ARNTLO00327 626 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 FBP2O00757 339 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 CFLARO15519 480 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 HOXC11O43248 304 aaPredicted RBP5.45□□□□□ -1.54
PCF11-205ENST00000530906 SMAD6O43541 496 aaKnown RBP5.45□□□□□ -1.54
PCF11-205ENST00000530906 RGS14O43566 566 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 AP1G1O43747 822 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 OR1I1O60431 355 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 UGDHO60701 494 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 ZNF821O75541 412 aaPredicted RBP5.45□□□□□ -1.54
PCF11-205ENST00000530906 SLC22A3O75751 556 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 SLC25A14O95258 325 aaPredicted RBP5.45□□□□□ -1.54
PCF11-205ENST00000530906 KRT6AP02538 564 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 FTH1P02794 183 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 KRT6BP04259 564 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 GPIP06744 558 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 ANXA5P08758 320 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 ALDOCP09972 364 aaKnown RBP5.45□□□□□ -1.54
PCF11-205ENST00000530906 UMPSP11172 480 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 UQCRBP14927 111 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 CTPS1P17812 591 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 XRCC1P18887 633 aaPredicted RBP5.45□□□□□ -1.54
PCF11-205ENST00000530906 POLR2EP19388 210 aaKnown RBP5.45□□□□□ -1.54
PCF11-205ENST00000530906 JAK1P23458 1154 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 MAPK1P28482 360 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 HLA-FP30511 346 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 SLC7A1P30825 629 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 VIPR1P32241 457 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 CD70P32970 193 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 KRT6CP48668 564 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 SPINT3P49223 89 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 CCNHP51946 323 aaPredicted RBP5.45□□□□□ -1.54
PCF11-205ENST00000530906 HNRNPFP52597 415 aaKnown RBP5.45□□□□□ -1.54
PCF11-205ENST00000530906 PGGT1BP53609 377 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 PNLIPRP1P54315 467 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 CDH13P55290 713 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 ZXDBP98169 803 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 MED21Q13503 144 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 GTF2H2Q13888 395 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 ARHGEF7Q14155 803 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 GBX1Q14549 363 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 INPP5AQ14642 412 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 EIF4HQ15056 248 aaKnown RBP5.45□□□□□ -1.54
PCF11-205ENST00000530906 TRIP10Q15642 601 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 CHRNA6Q15825 494 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms