RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 SYN2Q92777 582 aaPredicted RBP3.41□□□□□ -1.86
AMBRA1-208ENST00000529558 DTD2Q96FN9 168 aa3.41□□□□□ -1.86
AMBRA1-208ENST00000529558 NSMCE2Q96MF7 247 aa3.41□□□□□ -1.86
AMBRA1-208ENST00000529558 ZNF582Q96NG8 517 aaPredicted RBP3.41□□□□□ -1.86
AMBRA1-208ENST00000529558 RAD9AQ99638 391 aa3.41□□□□□ -1.86
AMBRA1-208ENST00000529558 TXN2Q99757 166 aa3.41□□□□□ -1.86
AMBRA1-208ENST00000529558 NTPCRQ9BSD7 190 aaKnown RBP3.41□□□□□ -1.86
AMBRA1-208ENST00000529558 BTBD10Q9BSF8 475 aa3.41□□□□□ -1.86
AMBRA1-208ENST00000529558 ZNF577Q9BSK1 485 aa3.41□□□□□ -1.86
AMBRA1-208ENST00000529558 POLDIP3Q9BY77 421 aaKnown RBP3.41□□□□□ -1.86
AMBRA1-208ENST00000529558 SPRY4Q9C004 299 aa3.41□□□□□ -1.86
AMBRA1-208ENST00000529558 ISCUQ9H1K1 167 aa3.41□□□□□ -1.86
AMBRA1-208ENST00000529558 SLA2Q9H6Q3 261 aa3.41□□□□□ -1.86
AMBRA1-208ENST00000529558 MAGEF1Q9HAY2 307 aa3.41□□□□□ -1.86
AMBRA1-208ENST00000529558 Q9N2K0 584 aa3.41□□□□□ -1.86
AMBRA1-208ENST00000529558 PARD6AQ9NPB6 346 aa3.41□□□□□ -1.86
AMBRA1-208ENST00000529558 NGBQ9NPG2 151 aa3.41□□□□□ -1.86
AMBRA1-208ENST00000529558 AATFQ9NY61 560 aaKnown RBP eCLIP3.41□□□□□ -1.86
AMBRA1-208ENST00000529558 NPAP1Q9NZP6 1156 aa3.41□□□□□ -1.86
AMBRA1-208ENST00000529558 UBQLN2Q9UHD9 624 aa3.41□□□□□ -1.86
AMBRA1-208ENST00000529558 TINAGQ9UJW2 476 aa3.41□□□□□ -1.86
AMBRA1-208ENST00000529558 FBXL2Q9UKC9 423 aa3.41□□□□□ -1.86
AMBRA1-208ENST00000529558 KCNK6Q9Y257 313 aa3.41□□□□□ -1.86
AMBRA1-208ENST00000529558 NUDCQ9Y266 331 aa3.41□□□□□ -1.86
AMBRA1-208ENST00000529558 HBS1LQ9Y450 684 aaKnown RBP3.41□□□□□ -1.86
AMBRA1-208ENST00000529558 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.41□□□□□ -1.86
AMBRA1-208ENST00000529558 UBE4BO95155 1302 aa3.41□□□□□ -1.86
AMBRA1-208ENST00000529558 A0A1W2PP11 408 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 FAM149AA5PLN7 773 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 GAGE12JA6NER3 117 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 DVL1O14640 695 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 MCF2LO15068 1137 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 ANGPT2O15123 496 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 RIPK2O43353 540 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 LDB2O43679 373 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 TLX3O43711 291 aaPredicted RBP3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 AKR7A3O95154 331 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 CTSAP10619 480 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 HSPA5P11021 654 aaKnown RBP3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 SKILP12757 684 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 MYL6BP14649 208 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 CYP2A7P20853 494 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 GPD1P21695 349 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 STX2P32856 288 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 PTGER4P35408 488 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 IFNAR2P48551 515 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 RPS13P62277 151 aaKnown RBP3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 TRA2BP62995 288 aaKnown RBP3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 CRYZQ08257 329 aaKnown RBP3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 PNRC1Q12796 327 aaPredicted RBP3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 TSTA3Q13630 321 aaPredicted RBP3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 ZNF268Q14587 947 aaPredicted RBP3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 KARSQ15046 597 aaKnown RBP3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 CDSNQ15517 529 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 CTU2Q2VPK5 515 aaKnown RBP3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 EPC2Q52LR7 807 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 RAB6CQ53S08 254 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 TAF1BQ53T94 588 aaPredicted RBP3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 AKNAD1Q5T1N1 836 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 PAPD7Q5XG87 772 aaKnown RBP3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 PRSS55Q6UWB4 352 aaPredicted RBP3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 BTNL8Q6UX41 500 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 WDR88Q6ZMY6 472 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 DEF8Q6ZN54 512 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 SLC16A12Q6ZSM3 486 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 MON1BQ7L1V2 547 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 ZNF367Q7RTV3 350 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 SYVN1Q86TM6 617 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 ANKRD46Q86W74 232 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 ZC3HC1Q86WB0 502 aaKnown RBP3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 AADATQ8N5Z0 425 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 SLC44A5Q8NCS7 719 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 VANGL1Q8TAA9 524 aaPredicted RBP3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 TMEM174Q8WUU8 243 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 SSMEM1Q8WWF3 244 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 CKAP2Q8WWK9 683 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 SMPDL3BQ92485 455 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 DVL3Q92997 716 aaPredicted RBP3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 RAB7BQ96AH8 199 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 SARAFQ96BY9 339 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 DTNBP1Q96EV8 351 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 C14orf79Q96F83 325 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 CDCA5Q96FF9 252 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 CFAP36Q96G28 342 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 C8orf49Q96NF6 230 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 LRFN5Q96NI6 719 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 KXD1Q9BQD3 176 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 ZNF559Q9BR84 538 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 ACPTQ9BZG2 426 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 RAB6CQ9H0N0 254 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 TSPYL1Q9H0U9 437 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 CARD9Q9H257 536 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 SEMA6AQ9H2E6 1030 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 FOXP1Q9H334 677 aaPredicted RBP3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 SNX25Q9H3E2 840 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 COQ10BQ9H8M1 238 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 KCNMB3Q9NPA1 279 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 ASB6Q9NWX5 421 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 SOHLH2Q9NX45 425 aa3.4□□□□□ -1.87
AMBRA1-208ENST00000529558 TMOD2Q9NZR1 351 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms