RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 DCTN2Q13561 401 aaKnown RBP4.73□□□□□ -1.65
CSDE1-212ENST00000529046 MXD4Q14582 209 aaPredicted RBP4.73□□□□□ -1.65
CSDE1-212ENST00000529046 UGCGQ16739 394 aa4.73□□□□□ -1.65
CSDE1-212ENST00000529046 USP41Q3LFD5 358 aa4.73□□□□□ -1.65
CSDE1-212ENST00000529046 ZNF585BQ52M93 769 aa4.73□□□□□ -1.65
CSDE1-212ENST00000529046 TDRD12Q587J7 1177 aaKnown RBP4.73□□□□□ -1.65
CSDE1-212ENST00000529046 PPP6R3Q5H9R7 873 aaPredicted RBP4.73□□□□□ -1.65
CSDE1-212ENST00000529046 CXorf66Q5JRM2 361 aaPredicted RBP4.73□□□□□ -1.65
CSDE1-212ENST00000529046 C6orf141Q5SZD1 244 aa4.73□□□□□ -1.65
CSDE1-212ENST00000529046 PDXDC1Q6P996 788 aa4.73□□□□□ -1.65
CSDE1-212ENST00000529046 OTUD6AQ7L8S5 288 aa4.73□□□□□ -1.65
CSDE1-212ENST00000529046 RNF168Q8IYW5 571 aaPredicted RBP4.73□□□□□ -1.65
CSDE1-212ENST00000529046 CLIP4Q8N3C7 705 aa4.73□□□□□ -1.65
CSDE1-212ENST00000529046 ANKRD52Q8NB46 1076 aa4.73□□□□□ -1.65
CSDE1-212ENST00000529046 TMEM116Q8NCL8 245 aa4.73□□□□□ -1.65
CSDE1-212ENST00000529046 TCP11Q8WWU5 503 aa4.73□□□□□ -1.65
CSDE1-212ENST00000529046 OIT3Q8WWZ8 545 aa4.73□□□□□ -1.65
CSDE1-212ENST00000529046 CCDC51Q96ER9 411 aa4.73□□□□□ -1.65
CSDE1-212ENST00000529046 ZC3HAV1LQ96H79 300 aaKnown RBP4.73□□□□□ -1.65
CSDE1-212ENST00000529046 IGSF21Q96ID5 467 aa4.73□□□□□ -1.65
CSDE1-212ENST00000529046 LRFN5Q96NI6 719 aa4.73□□□□□ -1.65
CSDE1-212ENST00000529046 TMEM175Q9BSA9 504 aa4.73□□□□□ -1.65
CSDE1-212ENST00000529046 NTPCRQ9BSD7 190 aaKnown RBP4.73□□□□□ -1.65
CSDE1-212ENST00000529046 NUF2Q9BZD4 464 aa4.73□□□□□ -1.65
CSDE1-212ENST00000529046 SPRY4Q9C004 299 aa4.73□□□□□ -1.65
CSDE1-212ENST00000529046 ZBP1Q9H171 429 aa4.73□□□□□ -1.65
CSDE1-212ENST00000529046 KCNN2Q9H2S1 579 aa4.73□□□□□ -1.65
CSDE1-212ENST00000529046 SLC6A13Q9NSD5 602 aa4.73□□□□□ -1.65
CSDE1-212ENST00000529046 AGPAT5Q9NUQ2 364 aa4.73□□□□□ -1.65
CSDE1-212ENST00000529046 HIF1ANQ9NWT6 349 aa4.73□□□□□ -1.65
CSDE1-212ENST00000529046 OR6C3Q9NZP0 311 aa4.73□□□□□ -1.65
CSDE1-212ENST00000529046 VPS54Q9P1Q0 977 aa4.73□□□□□ -1.65
CSDE1-212ENST00000529046 SUCLA2Q9P2R7 463 aaPredicted RBP4.73□□□□□ -1.65
CSDE1-212ENST00000529046 CTNNAL1Q9UBT7 734 aa4.73□□□□□ -1.65
CSDE1-212ENST00000529046 DDX25Q9UHL0 483 aaKnown RBP4.73□□□□□ -1.65
CSDE1-212ENST00000529046 ADAM18Q9Y3Q7 739 aa4.73□□□□□ -1.65
CSDE1-212ENST00000529046 INSL5Q9Y5Q6 135 aa4.73□□□□□ -1.65
CSDE1-212ENST00000529046 ATG2AQ2TAZ0 1938 aa4.73□□□□□ -1.65
CSDE1-212ENST00000529046 STK36Q9NRP7 1315 aa4.72□□□□□ -1.65
CSDE1-212ENST00000529046 MUC6Q6W4X9 2439 aa4.72□□□□□ -1.65
CSDE1-212ENST00000529046 HIDE1A8MVS5 230 aa4.72□□□□□ -1.65
CSDE1-212ENST00000529046 CPLX1O14810 134 aa4.72□□□□□ -1.65
CSDE1-212ENST00000529046 CXCL14O95715 111 aa4.72□□□□□ -1.65
CSDE1-212ENST00000529046 MLYCDO95822 493 aa4.72□□□□□ -1.65
CSDE1-212ENST00000529046 GLUD1P00367 558 aa4.72□□□□□ -1.65
CSDE1-212ENST00000529046 TFPIP10646 304 aa4.72□□□□□ -1.65
CSDE1-212ENST00000529046 MAOAP21397 527 aa4.72□□□□□ -1.65
CSDE1-212ENST00000529046 GLUD2P49448 558 aa4.72□□□□□ -1.65
CSDE1-212ENST00000529046 EGR4Q05215 589 aa4.72□□□□□ -1.65
CSDE1-212ENST00000529046 DSC1Q08554 894 aa4.72□□□□□ -1.65
CSDE1-212ENST00000529046 NCEH1Q6PIU2 408 aa4.72□□□□□ -1.65
CSDE1-212ENST00000529046 PALB2Q86YC2 1186 aa4.72□□□□□ -1.65
CSDE1-212ENST00000529046 PRSS33Q8NF86 280 aa4.72□□□□□ -1.65
CSDE1-212ENST00000529046 HUS1BQ8NHY5 278 aa4.72□□□□□ -1.65
CSDE1-212ENST00000529046 UCMAQ8WVF2 138 aa4.72□□□□□ -1.65
CSDE1-212ENST00000529046 ERGIC1Q969X5 290 aa4.72□□□□□ -1.65
CSDE1-212ENST00000529046 MMABQ96EY8 250 aaPredicted RBP4.72□□□□□ -1.65
CSDE1-212ENST00000529046 RPGRIP1Q96KN7 1286 aa4.72□□□□□ -1.65
CSDE1-212ENST00000529046 HSD17B14Q9BPX1 270 aa4.72□□□□□ -1.65
CSDE1-212ENST00000529046 ITPAQ9BY32 194 aa4.72□□□□□ -1.65
CSDE1-212ENST00000529046 LTB4R2Q9NPC1 389 aa4.72□□□□□ -1.65
CSDE1-212ENST00000529046 TBC1D13Q9NVG8 400 aa4.72□□□□□ -1.65
CSDE1-212ENST00000529046 MKLN1Q9UL63 735 aa4.72□□□□□ -1.65
CSDE1-212ENST00000529046 PLXNA4Q9HCM2 1894 aa4.72□□□□□ -1.65
CSDE1-212ENST00000529046 TECTAO75443 2155 aa4.72□□□□□ -1.65
CSDE1-212ENST00000529046 ZNF318Q5VUA4 2279 aa4.72□□□□□ -1.65
CSDE1-212ENST00000529046 MYO7AQ13402 2215 aa4.72□□□□□ -1.65
CSDE1-212ENST00000529046 KIAA1671Q9BY89 1806 aa4.72□□□□□ -1.65
CSDE1-212ENST00000529046 A0A0U1RQJ8 604 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 DYTNA2CJ06 578 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 TMEM202A6NGA9 273 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 LIPT2A6NK58 231 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 KDM4EB2RXH2 506 aaPredicted RBP4.71□□□□□ -1.66
CSDE1-212ENST00000529046 PRR23D1E9PI22 279 aaPredicted RBP4.71□□□□□ -1.66
CSDE1-212ENST00000529046 HSPA12AO43301 675 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 ITM2AO43736 263 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 SLC28A2O43868 658 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 PFKFB2O60825 505 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 SLITRK3O94933 977 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 BAG4O95429 457 aaKnown RBP4.71□□□□□ -1.66
CSDE1-212ENST00000529046 TDP2O95551 362 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 FTCDO95954 541 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 PRR23D2P0DMB1 279 aaPredicted RBP4.71□□□□□ -1.66
CSDE1-212ENST00000529046 DDX5P17844 614 aaKnown RBP4.71□□□□□ -1.66
CSDE1-212ENST00000529046 MUTP22033 750 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 HNRNPH1P31943 449 aaKnown RBP4.71□□□□□ -1.66
CSDE1-212ENST00000529046 YWHABP31946 246 aaKnown RBP4.71□□□□□ -1.66
CSDE1-212ENST00000529046 MLH1P40692 756 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 NBL1P41271 181 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 CLCN4P51793 760 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 PTENP60484 403 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 BNC1Q01954 994 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 NCBP1Q09161 790 aaKnown RBP4.71□□□□□ -1.66
CSDE1-212ENST00000529046 LAMTOR4Q0VGL1 99 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 CSTF3Q12996 717 aaKnown RBP4.71□□□□□ -1.66
CSDE1-212ENST00000529046 TRAF3Q13114 568 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 DRP2Q13474 957 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 PTPN14Q15678 1187 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 EFNB3Q15768 340 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 C2orf68Q2NKX9 166 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms