RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 GRIN2CQ14957 1233 aa14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 TLR1Q15399 786 aa14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 AASDHQ4L235 1098 aaPredicted RBP14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 ATAT1Q5SQI0 421 aa14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 OGFRL1Q5TC84 451 aaPredicted RBP14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 IL23RQ5VWK5 629 aa14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 PPP2R2DQ66LE6 453 aa14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 TANGO2Q6ICL3 276 aa14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 ANKRD54Q6NXT1 300 aa14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 TMEM220Q6QAJ8 160 aa14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 SCIMPQ6UWF3 145 aa14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 SPATA24Q86W54 205 aa14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 DHFR2Q86XF0 187 aa14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 AQP12AQ8IXF9 295 aa14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 RASGEF1AQ8N9B8 481 aa14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 MRPL38Q96DV4 380 aaKnown RBP14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 NUS1Q96E22 293 aa14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 LINC00615Q96LM1 132 aaPredicted RBP14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 NR1H4Q96RI1 486 aaPredicted RBP14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 LRTM1Q9HBL6 345 aa14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 TRIM39Q9HCM9 518 aa14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 C1orf109Q9NX04 203 aa14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 KLQ9UEF7 1012 aa14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 GPR34Q9UPC5 381 aa14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 RNF11Q9Y3C5 154 aa14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 MUC22E2RYF6 1773 aaPredicted RBP14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 PRSS51A0A1B0GVH4 220 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 TCRBV3S1A0A5B6 114 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 CAPNS1P04632 268 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 IL6P05231 212 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 PSMC3P17980 439 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 SLC6A2P23975 617 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 SLC7A1P30825 629 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 GPR1P46091 355 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 HTR6P50406 440 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 NME5P56597 212 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 PTCHD3Q3KNS1 767 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 LAYNQ6UX15 382 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 VITQ6UXI7 678 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 SLC15A3Q8IY34 581 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 SLC22A15Q8IZD6 547 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 AADATQ8N5Z0 425 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 CXorf40AQ8TE69 158 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 NAT14Q8WUY8 206 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 ELSPBP1Q96BH3 223 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 ZFYVE19Q96K21 471 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 BTBD9Q96Q07 612 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 PBX4Q9BYU1 374 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 SLC28A3Q9HAS3 691 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 CNOT11Q9UKZ1 510 aaKnown RBP14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 PCDHA9Q9Y5H5 950 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 KLHL33A6NCF5 533 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 OR2AG2A6NM03 316 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 MTX2O75431 263 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 RECQL5O94762 991 aaPredicted RBP14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 KAT7O95251 611 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 APODP05090 189 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 G6PDP11413 515 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 JUPP14923 745 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 GJA4P35212 333 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 OPRD1P41143 372 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 MAGEA10P43363 369 aaPredicted RBP14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 ZFP36L2P47974 494 aaKnown RBP14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 CLNS1AP54105 237 aaKnown RBP14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 PNLIPRP1P54315 467 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 MRPS22P82650 360 aaKnown RBP14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 MRPS35P82673 323 aaKnown RBP14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 KLC1Q07866 573 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 MAP7Q14244 749 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 ADGRE1Q14246 886 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 INPP5AQ14642 412 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 TRIP10Q15642 601 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 C10orf62Q5T681 223 aaPredicted RBP14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 IZUMO2Q6UXV1 221 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 RNF111Q6ZNA4 994 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 PDSS2Q86YH6 399 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 HID1Q8IV36 788 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 VRK3Q8IV63 474 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 RNF148Q8N7C7 305 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 ZNF366Q8N895 744 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 DCBLD1Q8N8Z6 715 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 SELENOMQ8WWX9 145 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 POP5Q969H6 163 aaKnown RBP14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 CMTM7Q96FZ5 175 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 SH3GL1Q99961 368 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 P2RY13Q9BPV8 354 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 C1orf50Q9BV19 199 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 NKX2-4Q9H2Z4 354 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 VCXQ9H320 206 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 ELOVL6Q9H5J4 265 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 CERS4Q9HA82 394 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 GPRC5BQ9NZH0 403 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 ACTR3BQ9P1U1 418 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 PACSIN3Q9UKS6 424 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 CNOT6Q9ULM6 557 aaKnown RBP14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 AP4S1Q9Y587 144 aa14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 DNMT3AQ9Y6K1 912 aaPredicted RBP14.41□□□□□ -0.1
ECHDC1-220ENST00000528402 KCNE1BA0A087WTH5 132 aa14.4□□□□□ -0.1
ECHDC1-220ENST00000528402 OTOL1A6NHN0 477 aaPredicted RBP14.4□□□□□ -0.1
ECHDC1-220ENST00000528402 H0YJX3 145 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms