RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 SEMA3CQ99985 751 aa5.62□□□□□ -1.51
PCF11-202ENST00000528336 CRACR2AQ9BSW2 395 aa5.62□□□□□ -1.51
PCF11-202ENST00000528336 FUT8Q9BYC5 575 aa5.62□□□□□ -1.51
PCF11-202ENST00000528336 PLK3Q9H4B4 646 aa5.62□□□□□ -1.51
PCF11-202ENST00000528336 SMARCAD1Q9H4L7 1026 aa5.62□□□□□ -1.51
PCF11-202ENST00000528336 EVA1AQ9H8M9 152 aa5.62□□□□□ -1.51
PCF11-202ENST00000528336 ZNF556Q9HAH1 456 aa5.62□□□□□ -1.51
PCF11-202ENST00000528336 EBF2Q9HAK2 575 aa5.62□□□□□ -1.51
PCF11-202ENST00000528336 MARCH4Q9P2E8 410 aaPredicted RBP5.62□□□□□ -1.51
PCF11-202ENST00000528336 MYOM2P54296 1465 aa5.62□□□□□ -1.51
PCF11-202ENST00000528336 POLR1AO95602 1720 aaPredicted RBP5.62□□□□□ -1.51
PCF11-202ENST00000528336 MYO5BQ9ULV0 1848 aa5.62□□□□□ -1.51
PCF11-202ENST00000528336 SCN5AQ14524 2016 aa5.62□□□□□ -1.51
PCF11-202ENST00000528336 A0A0U1RQK1 487 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 ZNF320A2RRD8 509 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 FAM90A26D6RGX4 464 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 PSMD14O00487 310 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 KIF5CO60282 957 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 KERAO60938 352 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 PIK3C2GO75747 1445 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 HIST1H2ABP04908 130 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 HIST1H2ADP20671 130 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 UGT1A1P22309 533 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 DGKAP23743 735 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 USP8P40818 1118 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 SSR1P43307 286 aaKnown RBP5.61□□□□□ -1.51
PCF11-202ENST00000528336 IQGAP1P46940 1657 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 CD151P48509 253 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 SLC26A5P58743 744 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 GTF2H2Q13888 395 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 ASTE1Q2TB18 679 aaPredicted RBP5.61□□□□□ -1.51
PCF11-202ENST00000528336 MYLK3Q32MK0 819 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 KBTBD12Q3ZCT8 623 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 ZNF672Q499Z4 452 aaPredicted RBP5.61□□□□□ -1.51
PCF11-202ENST00000528336 TMEM35AQ53FP2 167 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 ERMARDQ5T6L9 678 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 JADE1Q6IE81 842 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 GTF2H2CQ6P1K8 395 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 PAPD4Q6PIY7 484 aaKnown RBP5.61□□□□□ -1.51
PCF11-202ENST00000528336 RAD9BQ6WBX8 426 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 ADAMTS13Q76LX8 1427 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 HIST3H2AQ7L7L0 130 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 CCDC186Q7Z3E2 898 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 TMEM110Q86TL2 294 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 CCDC190Q86UF4 302 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 METTL23Q86XA0 190 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 KMT5CQ86Y97 462 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 RASGEF1CQ8N431 466 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 C10orf53Q8N6V4 93 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 LNX1Q8TBB1 728 aaPredicted RBP5.61□□□□□ -1.51
PCF11-202ENST00000528336 SLC38A5Q8WUX1 472 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 SLC44A1Q8WWI5 657 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 SEPT1Q8WYJ6 367 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 AK8Q96MA6 479 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 POLR3CQ9BUI4 534 aaPredicted RBP5.61□□□□□ -1.51
PCF11-202ENST00000528336 KRTAP1-5Q9BYS1 174 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 C1orf21Q9H246 121 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 EPB41L5Q9HCM4 733 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 MID1IP1Q9NPA3 183 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 FBXL17Q9UF56 701 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 PCSK1NQ9UHG2 260 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 NRXN1Q9ULB1 1477 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 SETBP1Q9Y6X0 1596 aa5.61□□□□□ -1.51
PCF11-202ENST00000528336 PPLO60437 1756 aa5.6□□□□□ -1.51
PCF11-202ENST00000528336 DIP2AQ14689 1571 aa5.6□□□□□ -1.51
PCF11-202ENST00000528336 PIK3R4Q99570 1358 aa5.6□□□□□ -1.51
PCF11-202ENST00000528336 KANSL1LA0AUZ9 987 aa5.6□□□□□ -1.51
PCF11-202ENST00000528336 ERICH4A6NGS2 130 aa5.6□□□□□ -1.51
PCF11-202ENST00000528336 C2orf81A6NN90 581 aa5.6□□□□□ -1.51
PCF11-202ENST00000528336 A8MZ25 164 aa5.6□□□□□ -1.51
PCF11-202ENST00000528336 H0YAE9 185 aa5.6□□□□□ -1.51
PCF11-202ENST00000528336 OGG1O15527 345 aa5.6□□□□□ -1.51
PCF11-202ENST00000528336 ZBTB43O43298 467 aa5.6□□□□□ -1.51
PCF11-202ENST00000528336 PLPP2O43688 288 aa5.6□□□□□ -1.51
PCF11-202ENST00000528336 LDB3O75112 727 aa5.6□□□□□ -1.51
PCF11-202ENST00000528336 DAB1O75553 588 aa5.6□□□□□ -1.51
PCF11-202ENST00000528336 OPN1MWP04001 364 aa5.6□□□□□ -1.51
PCF11-202ENST00000528336 RB1P06400 928 aa5.6□□□□□ -1.51
PCF11-202ENST00000528336 F7P08709 466 aaPredicted RBP5.6□□□□□ -1.51
PCF11-202ENST00000528336 OPN1MW2P0DN77 364 aa5.6□□□□□ -1.51
PCF11-202ENST00000528336 OPN1MW3P0DN78 364 aa5.6□□□□□ -1.51
PCF11-202ENST00000528336 GABRB1P18505 474 aa5.6□□□□□ -1.51
PCF11-202ENST00000528336 KCNA5P22460 613 aa5.6□□□□□ -1.51
PCF11-202ENST00000528336 GARSP41250 739 aaKnown RBP5.6□□□□□ -1.51
PCF11-202ENST00000528336 HTD2P86397 168 aa5.6□□□□□ -1.51
PCF11-202ENST00000528336 LASP1Q14847 261 aaKnown RBP5.6□□□□□ -1.51
PCF11-202ENST00000528336 SYT16Q17RD7 645 aa5.6□□□□□ -1.51
PCF11-202ENST00000528336 TYSND1Q2T9J0 566 aa5.6□□□□□ -1.51
PCF11-202ENST00000528336 PMS2CLQ68D20 193 aa5.6□□□□□ -1.51
PCF11-202ENST00000528336 IQCF2Q8IXL9 164 aa5.6□□□□□ -1.51
PCF11-202ENST00000528336 NAGSQ8N159 534 aa5.6□□□□□ -1.51
PCF11-202ENST00000528336 RFLNBQ8N5W9 214 aa5.6□□□□□ -1.51
PCF11-202ENST00000528336 FIBINQ8TAL6 211 aa5.6□□□□□ -1.51
PCF11-202ENST00000528336 DNAAF4Q8WXU2 420 aa5.6□□□□□ -1.51
PCF11-202ENST00000528336 ATP6V0A1Q93050 837 aa5.6□□□□□ -1.51
PCF11-202ENST00000528336 RUNDC3BQ96NL0 473 aa5.6□□□□□ -1.51
PCF11-202ENST00000528336 SRSF8Q9BRL6 282 aaKnown RBP5.6□□□□□ -1.51
PCF11-202ENST00000528336 SYT17Q9BSW7 474 aa5.6□□□□□ -1.51
PCF11-202ENST00000528336 SPXQ9BT56 116 aa5.6□□□□□ -1.51
PCF11-202ENST00000528336 SLC35C2Q9NQQ7 365 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms