RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 ZNF548Q8NEK5 533 aaPredicted RBP17.18■□□□□ 0.34
USH1C-205ENST00000527020 ULK4Q96C45 1275 aa17.18■□□□□ 0.34
USH1C-205ENST00000527020 MTFMTQ96DP5 389 aaKnown RBP17.18■□□□□ 0.34
USH1C-205ENST00000527020 SLC32A1Q9H598 525 aa17.18■□□□□ 0.34
USH1C-205ENST00000527020 ZDHHC6Q9H6R6 413 aa17.18■□□□□ 0.34
USH1C-205ENST00000527020 TRBV5-3A0A0A0MS03 114 aa17.18■□□□□ 0.34
USH1C-205ENST00000527020 TULP3O75386 442 aa17.18■□□□□ 0.34
USH1C-205ENST00000527020 CLDN9O95484 217 aa17.18■□□□□ 0.34
USH1C-205ENST00000527020 PDYNP01213 254 aa17.18■□□□□ 0.34
USH1C-205ENST00000527020 LRG1P02750 347 aa17.18■□□□□ 0.34
USH1C-205ENST00000527020 UGT2B4P06133 528 aa17.18■□□□□ 0.34
USH1C-205ENST00000527020 BCKDHAP12694 445 aa17.18■□□□□ 0.34
USH1C-205ENST00000527020 AKT1P31749 480 aa17.18■□□□□ 0.34
USH1C-205ENST00000527020 ADARB1P78563 741 aaKnown RBP17.18■□□□□ 0.34
USH1C-205ENST00000527020 CYP4F3Q08477 520 aa17.18■□□□□ 0.34
USH1C-205ENST00000527020 MAP7Q14244 749 aa17.18■□□□□ 0.34
USH1C-205ENST00000527020 MAPKAPK3Q16644 382 aa17.18■□□□□ 0.34
USH1C-205ENST00000527020 IMPG1Q17R60 797 aa17.18■□□□□ 0.34
USH1C-205ENST00000527020 VRK3Q8IV63 474 aa17.18■□□□□ 0.34
USH1C-205ENST00000527020 DHRSXQ8N5I4 330 aa17.18■□□□□ 0.34
USH1C-205ENST00000527020 GLB1L3Q8NCI6 653 aaPredicted RBP17.18■□□□□ 0.34
USH1C-205ENST00000527020 CLHC1Q8NHS4 586 aa17.18■□□□□ 0.34
USH1C-205ENST00000527020 ITFG1Q8TB96 612 aa17.18■□□□□ 0.34
USH1C-205ENST00000527020 CPEB1Q9BZB8 566 aaKnown RBP17.18■□□□□ 0.34
USH1C-205ENST00000527020 SLC6A13Q9NSD5 602 aa17.18■□□□□ 0.34
USH1C-205ENST00000527020 C1orf109Q9NX04 203 aa17.18■□□□□ 0.34
USH1C-205ENST00000527020 ARL15Q9NXU5 204 aa17.18■□□□□ 0.34
USH1C-205ENST00000527020 SLCO3A1Q9UIG8 710 aa17.18■□□□□ 0.34
USH1C-205ENST00000527020 KCNE1BA0A087WTH5 132 aa17.17■□□□□ 0.34
USH1C-205ENST00000527020 IL6P05231 212 aa17.17■□□□□ 0.34
USH1C-205ENST00000527020 RAP2AP10114 183 aa17.17■□□□□ 0.34
USH1C-205ENST00000527020 CA8P35219 290 aa17.17■□□□□ 0.34
USH1C-205ENST00000527020 CCR2P41597 374 aa17.17■□□□□ 0.34
USH1C-205ENST00000527020 WDR5P61964 334 aaKnown RBP17.17■□□□□ 0.34
USH1C-205ENST00000527020 PHC1P78364 1004 aa17.17■□□□□ 0.34
USH1C-205ENST00000527020 RBBP5Q15291 538 aaKnown RBP17.17■□□□□ 0.34
USH1C-205ENST00000527020 NKG7Q16617 165 aa17.17■□□□□ 0.34
USH1C-205ENST00000527020 CPSF6Q16630 551 aaKnown RBP eCLIP17.17■□□□□ 0.34
USH1C-205ENST00000527020 GTDC1Q4AE62 458 aa17.17■□□□□ 0.34
USH1C-205ENST00000527020 CDKL4Q5MAI5 379 aa17.17■□□□□ 0.34
USH1C-205ENST00000527020 CACHD1Q5VU97 1274 aa17.17■□□□□ 0.34
USH1C-205ENST00000527020 TMEM214Q6NUQ4 689 aaKnown RBP17.17■□□□□ 0.34
USH1C-205ENST00000527020 UBE2R2Q712K3 238 aaPredicted RBP17.17■□□□□ 0.34
USH1C-205ENST00000527020 TMEM25Q86YD3 366 aa17.17■□□□□ 0.34
USH1C-205ENST00000527020 CHST14Q8NCH0 376 aa17.17■□□□□ 0.34
USH1C-205ENST00000527020 TNIP2Q8NFZ5 429 aa17.17■□□□□ 0.34
USH1C-205ENST00000527020 OR2T12Q8NG77 320 aa17.17■□□□□ 0.34
USH1C-205ENST00000527020 OR10A6Q8NH74 314 aa17.17■□□□□ 0.34
USH1C-205ENST00000527020 BDH2Q9BUT1 245 aa17.17■□□□□ 0.34
USH1C-205ENST00000527020 BRD9Q9H8M2 597 aa17.17■□□□□ 0.34
USH1C-205ENST00000527020 GORASP2Q9H8Y8 452 aa17.17■□□□□ 0.34
USH1C-205ENST00000527020 TUBA8Q9NY65 449 aaPredicted RBP17.17■□□□□ 0.34
USH1C-205ENST00000527020 B4GALT6Q9UBX8 382 aa17.17■□□□□ 0.34
USH1C-205ENST00000527020 DLGAP4Q9Y2H0 992 aa17.17■□□□□ 0.34
USH1C-205ENST00000527020 PLXNA2O75051 1894 aa17.17■□□□□ 0.34
USH1C-205ENST00000527020 SEC24DO94855 1032 aaPredicted RBP17.16■□□□□ 0.34
USH1C-205ENST00000527020 ASLP04424 464 aa17.16■□□□□ 0.34
USH1C-205ENST00000527020 NFKBIAP25963 317 aa17.16■□□□□ 0.34
USH1C-205ENST00000527020 ITGB8P26012 769 aa17.16■□□□□ 0.34
USH1C-205ENST00000527020 SPINT3P49223 89 aa17.16■□□□□ 0.34
USH1C-205ENST00000527020 RUNDC3AQ59EK9 446 aa17.16■□□□□ 0.34
USH1C-205ENST00000527020 CARD16Q5EG05 197 aa17.16■□□□□ 0.34
USH1C-205ENST00000527020 DNAJC14Q6Y2X3 702 aaPredicted RBP17.16■□□□□ 0.34
USH1C-205ENST00000527020 DET1Q7L5Y6 550 aa17.16■□□□□ 0.34
USH1C-205ENST00000527020 GPR65Q8IYL9 337 aa17.16■□□□□ 0.34
USH1C-205ENST00000527020 ADAMTS16Q8TE57 1224 aa17.16■□□□□ 0.34
USH1C-205ENST00000527020 SLC12A9Q9BXP2 914 aa17.16■□□□□ 0.34
USH1C-205ENST00000527020 ACTR8Q9H981 624 aa17.16■□□□□ 0.34
USH1C-205ENST00000527020 TMEM39AQ9NV64 488 aa17.16■□□□□ 0.34
USH1C-205ENST00000527020 RSL24D1Q9UHA3 163 aaKnown RBP17.16■□□□□ 0.34
USH1C-205ENST00000527020 ATP11BQ9Y2G3 1177 aa17.16■□□□□ 0.34
USH1C-205ENST00000527020 PCDHGA11Q9Y5H2 935 aa17.16■□□□□ 0.34
USH1C-205ENST00000527020 KRT87PA6NCN2 255 aa17.16■□□□□ 0.34
USH1C-205ENST00000527020 EIF3FO00303 357 aaPredicted RBP17.16■□□□□ 0.34
USH1C-205ENST00000527020 C8AP07357 584 aa17.16■□□□□ 0.34
USH1C-205ENST00000527020 CTSAP10619 480 aa17.16■□□□□ 0.34
USH1C-205ENST00000527020 PCNAP12004 261 aa17.16■□□□□ 0.34
USH1C-205ENST00000527020 TCF3P15923 654 aa17.16■□□□□ 0.34
USH1C-205ENST00000527020 SLC6A12P48065 614 aa17.16■□□□□ 0.34
USH1C-205ENST00000527020 VEGFBP49765 207 aa17.16■□□□□ 0.34
USH1C-205ENST00000527020 CDK9P50750 372 aaKnown RBP17.16■□□□□ 0.34
USH1C-205ENST00000527020 ENPP6Q6UWR7 440 aa17.16■□□□□ 0.34
USH1C-205ENST00000527020 PATL1Q86TB9 770 aaKnown RBP17.16■□□□□ 0.34
USH1C-205ENST00000527020 PLPP6Q8IY26 295 aa17.16■□□□□ 0.34
USH1C-205ENST00000527020 SLC22A17Q8WUG5 538 aa17.16■□□□□ 0.34
USH1C-205ENST00000527020 ASB11Q8WXH4 323 aa17.16■□□□□ 0.34
USH1C-205ENST00000527020 FIG4Q92562 907 aa17.16■□□□□ 0.34
USH1C-205ENST00000527020 TMBIM1Q969X1 311 aa17.16■□□□□ 0.34
USH1C-205ENST00000527020 CORO1BQ9BR76 489 aa17.16■□□□□ 0.34
USH1C-205ENST00000527020 PARVBQ9HBI1 364 aa17.16■□□□□ 0.34
USH1C-205ENST00000527020 DDX18Q9NVP1 670 aaKnown RBP17.16■□□□□ 0.34
USH1C-205ENST00000527020 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.16■□□□□ 0.34
USH1C-205ENST00000527020 CD84Q9UIB8 345 aa17.16■□□□□ 0.34
USH1C-205ENST00000527020 MAGED1Q9Y5V3 778 aaPredicted RBP17.16■□□□□ 0.34
USH1C-205ENST00000527020 MTCL1Q9Y4B5 1905 aaKnown RBP17.15■□□□□ 0.34
USH1C-205ENST00000527020 A0A087WXM4 84 aa17.15■□□□□ 0.34
USH1C-205ENST00000527020 NUAK1O60285 661 aa17.15■□□□□ 0.34
USH1C-205ENST00000527020 PRAMEF4O60810 478 aa17.15■□□□□ 0.34
USH1C-205ENST00000527020 FGF18O76093 207 aa17.15■□□□□ 0.34
USH1C-205ENST00000527020 ARHGEF15O94989 841 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms