RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 H3BQ06 376 aaPredicted RBP4.52□□□□□ -1.69
USP48-211ENST00000526044 PIP5K1BO14986 540 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 NPC1O15118 1278 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 MDM4O15151 490 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 DHHO43323 396 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 COCHO43405 550 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 SPOPO43791 374 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 PRPSAP2O60256 369 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 TBX10O75333 385 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 MOSPD3O75425 235 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 PALMO75781 387 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 OAS1P00973 400 aaKnown RBP4.52□□□□□ -1.69
USP48-211ENST00000526044 PYGLP06737 847 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 HMBSP08397 361 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 SLC2A3P11169 496 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 TNNT1P13805 278 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 KCNA5P22460 613 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 MIPP30301 263 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 CCR1P32246 355 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 RDXP35241 583 aaKnown RBP4.52□□□□□ -1.69
USP48-211ENST00000526044 AVPR1AP37288 418 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 RXRGP48443 463 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 HARS2P49590 506 aaKnown RBP4.52□□□□□ -1.69
USP48-211ENST00000526044 CXCR3P49682 368 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 TUBP50607 506 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 ZNF81P51508 661 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 GNG11P61952 73 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 SLC7A9P82251 487 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 OGDHQ02218 1023 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 MTA1Q13330 715 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 STARD3Q14849 445 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 KPNB1Q14974 876 aaKnown RBP4.52□□□□□ -1.69
USP48-211ENST00000526044 TRIP6Q15654 476 aaKnown RBP4.52□□□□□ -1.69
USP48-211ENST00000526044 BOLA3Q53S33 107 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 ODF2Q5BJF6 829 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 ZNF569Q5MCW4 686 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 ERMARDQ5T6L9 678 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 TRNP1Q6NT89 227 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 MZT2BQ6NZ67 158 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 FAM180BQ6P0A1 224 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 MSANTD2Q6P1R3 559 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 STRADAQ7RTN6 431 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 PEX26Q7Z412 305 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 SLFN11Q7Z7L1 901 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 ARID3BQ8IVW6 561 aaPredicted RBP4.52□□□□□ -1.69
USP48-211ENST00000526044 UNC45BQ8IWX7 931 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 CMTM8Q8IZV2 173 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 C17orf53Q8N3J3 647 aaPredicted RBP4.52□□□□□ -1.69
USP48-211ENST00000526044 NIPA2Q8N8Q9 360 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 ATP6V0D2Q8N8Y2 350 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 TRIM58Q8NG06 486 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 PRSS3P2Q8NHM4 247 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 ITFG1Q8TB96 612 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 DQX1Q8TE96 717 aaKnown RBP4.52□□□□□ -1.69
USP48-211ENST00000526044 AKAP1Q92667 903 aaKnown RBP eCLIP4.52□□□□□ -1.69
USP48-211ENST00000526044 FGF13Q92913 245 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 RPL36ALQ969Q0 106 aaKnown RBP4.52□□□□□ -1.69
USP48-211ENST00000526044 AZIN2Q96A70 460 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 TCEAL4Q96EI5 215 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 NECTIN4Q96NY8 510 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 SERPINB11Q96P15 392 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 ALS2CR12Q96Q35 445 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 SLC22A12Q96S37 553 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 CRB3Q9BUF7 120 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 DCLK3Q9C098 648 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 EPS8L2Q9H6S3 715 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 UBE2ZQ9H832 354 aaPredicted RBP4.52□□□□□ -1.69
USP48-211ENST00000526044 DDIT4Q9NX09 232 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 GDE1Q9NZC3 331 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.52□□□□□ -1.69
USP48-211ENST00000526044 PCSK1NQ9UHG2 260 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 CDC23Q9UJX2 597 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 CDH7Q9ULB5 785 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 LRCH1Q9Y2L9 728 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 GPR52Q9Y2T5 361 aa4.52□□□□□ -1.69
USP48-211ENST00000526044 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.52□□□□□ -1.69
USP48-211ENST00000526044 HBS1LQ9Y450 684 aaKnown RBP4.52□□□□□ -1.69
USP48-211ENST00000526044 ZFP37Q9Y6Q3 630 aaPredicted RBP4.52□□□□□ -1.69
USP48-211ENST00000526044 CEP290O15078 2479 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 MIF4GDA9UHW6 222 aaKnown RBP4.51□□□□□ -1.69
USP48-211ENST00000526044 TP73O15350 636 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 FFAR2O15552 330 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 IRAK2O43187 625 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 MSI1O43347 362 aaKnown RBP4.51□□□□□ -1.69
USP48-211ENST00000526044 MBTPS2O43462 519 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 LRCH4O75427 683 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 OLFM2O95897 454 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 IGLV3-25P01717 112 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 APOEP02649 317 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 ANXA6P08133 673 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 KRT7P08729 469 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 LAMP2P13473 410 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 ALADP13716 330 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 GLULP15104 373 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 CEBPBP17676 345 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 HOXD12P35452 270 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 PCK1P35558 622 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 CHKAP35790 457 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 CETN2P41208 172 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 MMP13P45452 471 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms