RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 CHORDC1Q9UHD1 332 aaPredicted RBP3.74□□□□□ -1.81
CD44-219ENST00000525685 RALYQ9UKM9 306 aaKnown RBP3.74□□□□□ -1.81
CD44-219ENST00000525685 DDX19BQ9UMR2 479 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 PA2G4Q9UQ80 394 aaKnown RBP3.74□□□□□ -1.81
CD44-219ENST00000525685 B3GALT5Q9Y2C3 310 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 PTRH2Q9Y3E5 179 aaKnown RBP3.74□□□□□ -1.81
CD44-219ENST00000525685 OR2W1Q9Y3N9 320 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 RABGAP1Q9Y3P9 1069 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 SNX8Q9Y5X2 465 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.74□□□□□ -1.81
CD44-219ENST00000525685 SRCAPQ6ZRS2 3230 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 COL1A1P02452 1464 aaPredicted RBP3.73□□□□□ -1.81
CD44-219ENST00000525685 MROH5Q6ZUA9 1318 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 LILRA5A6NI73 299 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 SRRM3A6NNA2 597 aaPredicted RBP3.73□□□□□ -1.81
CD44-219ENST00000525685 C15orf62A8K5M9 175 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 SMTNL1A8MU46 457 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 CDRT15L2A8MXV6 281 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 TMEM189-UBE2V1I3L0A0 370 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 KRT86O43790 486 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 AHCYL1O43865 530 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 WDR1O75083 606 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 AVILO75366 819 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 CIAO1O76071 339 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 ATP1A1P05023 1023 aaKnown RBP3.73□□□□□ -1.81
CD44-219ENST00000525685 CETPP11597 493 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 VPREB1P12018 145 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 MMP9P14780 707 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 ITGA2P17301 1181 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 ACADLP28330 430 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 STAT2P52630 851 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 CTSCP53634 463 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 CXCL9Q07325 125 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 PLA2G7Q13093 441 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 UBE2V1Q13404 147 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 KRT81Q14533 505 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 ZNF234Q14588 700 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 DLG2Q15700 870 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 KRTCAP3Q53RY4 240 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 PDSS1Q5T2R2 415 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 KRTAP5-11Q6L8G4 156 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 ZNF704Q6ZNC4 412 aaPredicted RBP3.73□□□□□ -1.81
CD44-219ENST00000525685 TPRG1Q6ZUI0 275 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 C15orf52Q6ZUT6 534 aaKnown RBP3.73□□□□□ -1.81
CD44-219ENST00000525685 SLC9B2Q86UD5 537 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 TSPAN33Q86UF1 283 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 GPC2Q8N158 579 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 MUC20Q8N307 709 aaPredicted RBP3.73□□□□□ -1.81
CD44-219ENST00000525685 METTL27Q8N6F8 245 aaPredicted RBP3.73□□□□□ -1.81
CD44-219ENST00000525685 IL17RCQ8NAC3 791 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 OR13A1Q8NGR1 328 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 OR5R1Q8NH85 324 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 TMEM255BQ8WV15 326 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 NAP1L5Q96NT1 182 aaPredicted RBP3.73□□□□□ -1.81
CD44-219ENST00000525685 PAFAH2Q99487 392 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 KIFC3Q9BVG8 833 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 FKRPQ9H9S5 495 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 PLSCR4Q9NRQ2 329 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 PAG1Q9NWQ8 432 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 TAS2R14Q9NYV8 317 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 SEC63Q9UGP8 760 aaKnown RBP3.73□□□□□ -1.81
CD44-219ENST00000525685 PADI3Q9ULW8 664 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 PPIEQ9UNP9 301 aaKnown RBP3.73□□□□□ -1.81
CD44-219ENST00000525685 EXO1Q9UQ84 846 aaKnown RBP3.73□□□□□ -1.81
CD44-219ENST00000525685 MYH13Q9UKX3 1938 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 MAST2Q6P0Q8 1798 aa3.73□□□□□ -1.81
CD44-219ENST00000525685 LOC100509620A0A075B734 347 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 OR5K3A6NET4 321 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 A6NL46 340 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 ANKRD66B4E2M5 251 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 C16orf97H3BN30 126 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 J3QR06 171 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 PSMD14O00487 310 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 BUB3O43684 328 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 BUD23O43709 281 aaKnown RBP3.72□□□□□ -1.81
CD44-219ENST00000525685 ZWINTO95229 277 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 BMP10O95393 424 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 PPP1R3DO95685 299 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 CAVIN2O95810 425 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 FAM106CPP0CH98 169 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 DGKAP23743 735 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 HRH2P25021 359 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 ADORA1P30542 326 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 ACSL1P33121 698 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 NNMTP40261 264 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 GYG1P46976 350 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 GMPSP49915 693 aaPredicted RBP3.72□□□□□ -1.81
CD44-219ENST00000525685 MLLT10P55197 1068 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 SNRPEP62304 92 aaKnown RBP3.72□□□□□ -1.81
CD44-219ENST00000525685 RPL36AP83881 106 aaKnown RBP3.72□□□□□ -1.81
CD44-219ENST00000525685 PRPF4BQ13523 1007 aaKnown RBP3.72□□□□□ -1.81
CD44-219ENST00000525685 GPR139Q6DWJ6 353 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 FAM171BQ6P995 826 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 TMCO3Q6UWJ1 677 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 GFRALQ6UXV0 394 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 GDPD4Q6W3E5 623 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.72□□□□□ -1.81
CD44-219ENST00000525685 KCTD8Q6ZWB6 473 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 ENOSF1Q7L5Y1 443 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 SATL1Q86VE3 508 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms