RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 OTOAQ7RTW8 1153 aa11.6□□□□□ -0.55
CLN8-207ENST00000524258 ZBED8Q8IZ13 594 aa11.6□□□□□ -0.55
CLN8-207ENST00000524258 ZBTB2Q8N680 514 aa11.6□□□□□ -0.55
CLN8-207ENST00000524258 LMNTD1Q8N9Z9 388 aa11.6□□□□□ -0.55
CLN8-207ENST00000524258 LINC01555Q8NAE3 123 aa11.6□□□□□ -0.55
CLN8-207ENST00000524258 SIDT2Q8NBJ9 832 aaKnown RBP11.6□□□□□ -0.55
CLN8-207ENST00000524258 GSDMBQ8TAX9 411 aa11.6□□□□□ -0.55
CLN8-207ENST00000524258 DENND1AQ8TEH3 1009 aa11.6□□□□□ -0.55
CLN8-207ENST00000524258 LCN9Q8WX39 176 aa11.6□□□□□ -0.55
CLN8-207ENST00000524258 USP7Q93009 1102 aa11.6□□□□□ -0.55
CLN8-207ENST00000524258 GPR21Q99679 349 aa11.6□□□□□ -0.55
CLN8-207ENST00000524258 MAP3K3Q99759 626 aa11.6□□□□□ -0.55
CLN8-207ENST00000524258 L2HGDHQ9H9P8 463 aa11.6□□□□□ -0.55
CLN8-207ENST00000524258 SAYSD1Q9NPB0 183 aa11.6□□□□□ -0.55
CLN8-207ENST00000524258 SPHK1Q9NYA1 384 aa11.6□□□□□ -0.55
CLN8-207ENST00000524258 FOXJ2Q9P0K8 574 aa11.6□□□□□ -0.55
CLN8-207ENST00000524258 PISDQ9UG56 409 aa11.6□□□□□ -0.55
CLN8-207ENST00000524258 KLHL3Q9UH77 587 aa11.6□□□□□ -0.55
CLN8-207ENST00000524258 POLG2Q9UHN1 485 aa11.6□□□□□ -0.55
CLN8-207ENST00000524258 POMT2Q9UKY4 750 aa11.6□□□□□ -0.55
CLN8-207ENST00000524258 RUVBL2Q9Y230 463 aaKnown RBP11.6□□□□□ -0.55
CLN8-207ENST00000524258 COMMD10Q9Y6G5 202 aa11.6□□□□□ -0.55
CLN8-207ENST00000524258 CHD6Q8TD26 2715 aa11.6□□□□□ -0.55
CLN8-207ENST00000524258 ZFYVE26Q68DK2 2539 aa11.6□□□□□ -0.55
CLN8-207ENST00000524258 CTAGE15A4D2H0 777 aa11.59□□□□□ -0.55
CLN8-207ENST00000524258 KRT87PA6NCN2 255 aa11.59□□□□□ -0.55
CLN8-207ENST00000524258 PFDN6O15212 129 aa11.59□□□□□ -0.55
CLN8-207ENST00000524258 PIAS1O75925 651 aa11.59□□□□□ -0.55
CLN8-207ENST00000524258 TSPAN12O95859 305 aa11.59□□□□□ -0.55
CLN8-207ENST00000524258 CTAGE8P0CG41 777 aa11.59□□□□□ -0.55
CLN8-207ENST00000524258 NELFEP18615 380 aaKnown RBP11.59□□□□□ -0.55
CLN8-207ENST00000524258 POLR2CP19387 275 aaPredicted RBP11.59□□□□□ -0.55
CLN8-207ENST00000524258 CHRM3P20309 590 aa11.59□□□□□ -0.55
CLN8-207ENST00000524258 PKLRP30613 574 aa11.59□□□□□ -0.55
CLN8-207ENST00000524258 SSTR1P30872 391 aa11.59□□□□□ -0.55
CLN8-207ENST00000524258 PGGT1BP53609 377 aa11.59□□□□□ -0.55
CLN8-207ENST00000524258 SH3BP2P78314 561 aa11.59□□□□□ -0.55
CLN8-207ENST00000524258 PLCL1Q15111 1095 aa11.59□□□□□ -0.55
CLN8-207ENST00000524258 TMED2Q15363 201 aa11.59□□□□□ -0.55
CLN8-207ENST00000524258 GLE1Q53GS7 698 aaKnown RBP11.59□□□□□ -0.55
CLN8-207ENST00000524258 UBAP2Q5T6F2 1119 aaKnown RBP11.59□□□□□ -0.55
CLN8-207ENST00000524258 CACHD1Q5VU97 1274 aa11.59□□□□□ -0.55
CLN8-207ENST00000524258 IRGCQ6NXR0 463 aa11.59□□□□□ -0.55
CLN8-207ENST00000524258 KLHL35Q6PF15 583 aa11.59□□□□□ -0.55
CLN8-207ENST00000524258 FBXO38Q6PIJ6 1188 aa11.59□□□□□ -0.55
CLN8-207ENST00000524258 FOXR1Q6PIV2 292 aa11.59□□□□□ -0.55
CLN8-207ENST00000524258 FAM92BQ6ZTR7 304 aa11.59□□□□□ -0.55
CLN8-207ENST00000524258 NEK10Q6ZWH5 1172 aa11.59□□□□□ -0.55
CLN8-207ENST00000524258 CTAGE6Q86UF2 777 aa11.59□□□□□ -0.55
CLN8-207ENST00000524258 AMIGO1Q86WK6 493 aa11.59□□□□□ -0.55
CLN8-207ENST00000524258 DTX1Q86Y01 620 aa11.59□□□□□ -0.55
CLN8-207ENST00000524258 CTAGE4Q8IX94 777 aa11.59□□□□□ -0.55
CLN8-207ENST00000524258 MNS1Q8NEH6 495 aa11.59□□□□□ -0.55
CLN8-207ENST00000524258 DLG3Q92796 817 aa11.59□□□□□ -0.55
CLN8-207ENST00000524258 ZDHHC12Q96GR4 267 aa11.59□□□□□ -0.55
CLN8-207ENST00000524258 OR2A14Q96R47 310 aa11.59□□□□□ -0.55
CLN8-207ENST00000524258 CD180Q99467 661 aa11.59□□□□□ -0.55
CLN8-207ENST00000524258 NDNQ99608 321 aa11.59□□□□□ -0.55
CLN8-207ENST00000524258 PITPNM3Q9BZ71 974 aa11.59□□□□□ -0.55
CLN8-207ENST00000524258 TRIT1Q9H3H1 467 aaKnown RBP11.59□□□□□ -0.55
CLN8-207ENST00000524258 SRMSQ9H3Y6 488 aa11.59□□□□□ -0.55
CLN8-207ENST00000524258 LRRC4CQ9HCJ2 640 aa11.59□□□□□ -0.55
CLN8-207ENST00000524258 APMAPQ9HDC9 416 aa11.59□□□□□ -0.55
CLN8-207ENST00000524258 FBXO8Q9NRD0 319 aa11.59□□□□□ -0.55
CLN8-207ENST00000524258 PLAGL1Q9UM63 463 aa11.59□□□□□ -0.55
CLN8-207ENST00000524258 MGAQ8IWI9 3026 aa11.59□□□□□ -0.55
CLN8-207ENST00000524258 TCRBV9S1A1TA0A576 114 aa11.58□□□□□ -0.56
CLN8-207ENST00000524258 TLCD2A6NGC4 264 aa11.58□□□□□ -0.56
CLN8-207ENST00000524258 FAM159BA6NKW6 160 aa11.58□□□□□ -0.56
CLN8-207ENST00000524258 EFCAB7A8K855 629 aa11.58□□□□□ -0.56
CLN8-207ENST00000524258 ARHGEF33A8MVX0 844 aa11.58□□□□□ -0.56
CLN8-207ENST00000524258 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.58□□□□□ -0.56
CLN8-207ENST00000524258 GFYI3L273 518 aa11.58□□□□□ -0.56
CLN8-207ENST00000524258 PRAMEF10O60809 474 aa11.58□□□□□ -0.56
CLN8-207ENST00000524258 PSIP1O75475 530 aaKnown RBP11.58□□□□□ -0.56
CLN8-207ENST00000524258 WISP3O95389 354 aaPredicted RBP11.58□□□□□ -0.56
CLN8-207ENST00000524258 JMJD7P0C870 316 aa11.58□□□□□ -0.56
CLN8-207ENST00000524258 ERGP11308 486 aa11.58□□□□□ -0.56
CLN8-207ENST00000524258 FDXRP22570 491 aa11.58□□□□□ -0.56
CLN8-207ENST00000524258 RBMS1P29558 406 aaKnown RBP11.58□□□□□ -0.56
CLN8-207ENST00000524258 PRDX3P30048 256 aaKnown RBP11.58□□□□□ -0.56
CLN8-207ENST00000524258 CSTF2P33240 577 aaKnown RBP eCLIP11.58□□□□□ -0.56
CLN8-207ENST00000524258 MAGEA4P43358 317 aa11.58□□□□□ -0.56
CLN8-207ENST00000524258 KRT33BQ14525 404 aa11.58□□□□□ -0.56
CLN8-207ENST00000524258 KLHL38Q2WGJ6 581 aa11.58□□□□□ -0.56
CLN8-207ENST00000524258 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.58□□□□□ -0.56
CLN8-207ENST00000524258 TMEM207Q6UWW9 146 aa11.58□□□□□ -0.56
CLN8-207ENST00000524258 ZC3HC1Q86WB0 502 aaKnown RBP11.58□□□□□ -0.56
CLN8-207ENST00000524258 OOSP2Q86WS3 158 aa11.58□□□□□ -0.56
CLN8-207ENST00000524258 RELL1Q8IUW5 271 aa11.58□□□□□ -0.56
CLN8-207ENST00000524258 DCUN1D3Q8IWE4 304 aa11.58□□□□□ -0.56
CLN8-207ENST00000524258 CARFQ8N187 725 aa11.58□□□□□ -0.56
CLN8-207ENST00000524258 D2HGDHQ8N465 521 aa11.58□□□□□ -0.56
CLN8-207ENST00000524258 PYROXD1Q8WU10 500 aa11.58□□□□□ -0.56
CLN8-207ENST00000524258 ASB11Q8WXH4 323 aa11.58□□□□□ -0.56
CLN8-207ENST00000524258 UBXN4Q92575 508 aa11.58□□□□□ -0.56
CLN8-207ENST00000524258 INPP5DQ92835 1189 aa11.58□□□□□ -0.56
CLN8-207ENST00000524258 IL17FQ96PD4 163 aa11.58□□□□□ -0.56
CLN8-207ENST00000524258 TAAR9Q96RI9 348 aa11.58□□□□□ -0.56
CLN8-207ENST00000524258 OLFM1Q99784 485 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms