RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 ASF1AQ9Y294 204 aa18.16■□□□□ 0.5
PTP4A3-206ENST00000524028 TNRC6AQ8NDV7 1962 aaKnown RBP18.16■□□□□ 0.5
PTP4A3-206ENST00000524028 USP9YO00507 2555 aaPredicted RBP18.15■□□□□ 0.5
PTP4A3-206ENST00000524028 ZNF185O15231 689 aa18.15■□□□□ 0.5
PTP4A3-206ENST00000524028 SORBS2O94875 1100 aaKnown RBP18.15■□□□□ 0.5
PTP4A3-206ENST00000524028 CHRM5P08912 532 aaPredicted RBP18.15■□□□□ 0.5
PTP4A3-206ENST00000524028 CBSLP0DN79 551 aa18.15■□□□□ 0.5
PTP4A3-206ENST00000524028 SHMT2P34897 504 aa18.15■□□□□ 0.5
PTP4A3-206ENST00000524028 CBSP35520 551 aa18.15■□□□□ 0.5
PTP4A3-206ENST00000524028 GRIA1P42261 906 aa18.15■□□□□ 0.5
PTP4A3-206ENST00000524028 ATP1A4Q13733 1029 aa18.15■□□□□ 0.5
PTP4A3-206ENST00000524028 DEFB110Q30KQ9 67 aa18.15■□□□□ 0.5
PTP4A3-206ENST00000524028 LINC00523Q86TU6 105 aa18.15■□□□□ 0.5
PTP4A3-206ENST00000524028 TBC1D21Q8IYX1 336 aa18.15■□□□□ 0.5
PTP4A3-206ENST00000524028 SYCE1Q8N0S2 351 aa18.15■□□□□ 0.5
PTP4A3-206ENST00000524028 CPT1CQ8TCG5 803 aa18.15■□□□□ 0.5
PTP4A3-206ENST00000524028 TCTN2Q96GX1 697 aa18.15■□□□□ 0.5
PTP4A3-206ENST00000524028 ZNF778Q96MU6 729 aa18.15■□□□□ 0.5
PTP4A3-206ENST00000524028 PSMG3-AS1Q96PY0 264 aa18.15■□□□□ 0.5
PTP4A3-206ENST00000524028 ALS2CR12Q96Q35 445 aa18.15■□□□□ 0.5
PTP4A3-206ENST00000524028 SLC7A5P2Q9GIP4 190 aa18.15■□□□□ 0.5
PTP4A3-206ENST00000524028 ETNK1Q9HBU6 452 aa18.15■□□□□ 0.5
PTP4A3-206ENST00000524028 TDRKHQ9Y2W6 561 aaKnown RBP18.15■□□□□ 0.5
PTP4A3-206ENST00000524028 CAPN6Q9Y6Q1 641 aa18.15■□□□□ 0.5
PTP4A3-206ENST00000524028 MED13Q9UHV7 2174 aa18.14■□□□□ 0.49
PTP4A3-206ENST00000524028 A6NL46 340 aa18.14■□□□□ 0.49
PTP4A3-206ENST00000524028 KLF7O75840 302 aaPredicted RBP18.14■□□□□ 0.49
PTP4A3-206ENST00000524028 GOT2P00505 430 aaKnown RBP18.14■□□□□ 0.49
PTP4A3-206ENST00000524028 FTH1P02794 183 aa18.14■□□□□ 0.49
PTP4A3-206ENST00000524028 GNLYP22749 145 aa18.14■□□□□ 0.49
PTP4A3-206ENST00000524028 PEBP1P30086 187 aaKnown RBP18.14■□□□□ 0.49
PTP4A3-206ENST00000524028 KIF5AQ12840 1032 aa18.14■□□□□ 0.49
PTP4A3-206ENST00000524028 PRUNE1Q86TP1 453 aa18.14■□□□□ 0.49
PTP4A3-206ENST00000524028 OR5K2Q8NHB8 316 aa18.14■□□□□ 0.49
PTP4A3-206ENST00000524028 HDAC10Q969S8 669 aa18.14■□□□□ 0.49
PTP4A3-206ENST00000524028 DPH2Q9BQC3 489 aaPredicted RBP18.14■□□□□ 0.49
PTP4A3-206ENST00000524028 IMPACTQ9P2X3 320 aa18.14■□□□□ 0.49
PTP4A3-206ENST00000524028 MAP4K5Q9Y4K4 846 aa18.14■□□□□ 0.49
PTP4A3-206ENST00000524028 QSOX1O00391 747 aa18.13■□□□□ 0.49
PTP4A3-206ENST00000524028 LIASO43766 372 aa18.13■□□□□ 0.49
PTP4A3-206ENST00000524028 VPS4BO75351 444 aa18.13■□□□□ 0.49
PTP4A3-206ENST00000524028 OR2B3O76000 313 aa18.13■□□□□ 0.49
PTP4A3-206ENST00000524028 SUN1O94901 812 aa18.13■□□□□ 0.49
PTP4A3-206ENST00000524028 HBQ1P09105 142 aa18.13■□□□□ 0.49
PTP4A3-206ENST00000524028 GP1BBP13224 206 aa18.13■□□□□ 0.49
PTP4A3-206ENST00000524028 AGXTP21549 392 aa18.13■□□□□ 0.49
PTP4A3-206ENST00000524028 CDH17Q12864 832 aa18.13■□□□□ 0.49
PTP4A3-206ENST00000524028 SEMA3AQ14563 771 aa18.13■□□□□ 0.49
PTP4A3-206ENST00000524028 OASLQ15646 514 aaKnown RBP18.13■□□□□ 0.49
PTP4A3-206ENST00000524028 C1orf189Q5VU69 101 aa18.13■□□□□ 0.49
PTP4A3-206ENST00000524028 JMJD6Q6NYC1 403 aaPredicted RBP18.13■□□□□ 0.49
PTP4A3-206ENST00000524028 MED25Q71SY5 747 aa18.13■□□□□ 0.49
PTP4A3-206ENST00000524028 ZNF534Q76KX8 674 aa18.13■□□□□ 0.49
PTP4A3-206ENST00000524028 HOOK3Q86VS8 718 aa18.13■□□□□ 0.49
PTP4A3-206ENST00000524028 TMEM151BQ8IW70 566 aa18.13■□□□□ 0.49
PTP4A3-206ENST00000524028 FAM20CQ8IXL6 584 aa18.13■□□□□ 0.49
PTP4A3-206ENST00000524028 GPR135Q8IZ08 494 aa18.13■□□□□ 0.49
PTP4A3-206ENST00000524028 TMEM102Q8N9M5 508 aaPredicted RBP18.13■□□□□ 0.49
PTP4A3-206ENST00000524028 DNAAF3Q8N9W5 541 aa18.13■□□□□ 0.49
PTP4A3-206ENST00000524028 Q8NA96 180 aa18.13■□□□□ 0.49
PTP4A3-206ENST00000524028 GLIS1Q8NBF1 620 aa18.13■□□□□ 0.49
PTP4A3-206ENST00000524028 GALNT11Q8NCW6 608 aa18.13■□□□□ 0.49
PTP4A3-206ENST00000524028 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.13■□□□□ 0.491e-9■■■■■ 31.4
PTP4A3-206ENST00000524028 MFRPQ9BY79 579 aa18.13■□□□□ 0.49
PTP4A3-206ENST00000524028 OR6C2Q9NZP2 312 aa18.13■□□□□ 0.49
PTP4A3-206ENST00000524028 LUZP4Q9P127 313 aa18.13■□□□□ 0.49
PTP4A3-206ENST00000524028 POLG2Q9UHN1 485 aa18.13■□□□□ 0.49
PTP4A3-206ENST00000524028 VPS4AQ9UN37 437 aa18.13■□□□□ 0.49
PTP4A3-206ENST00000524028 ZNF451Q9Y4E5 1061 aa18.13■□□□□ 0.49
PTP4A3-206ENST00000524028 A0A0J9YY10 115 aa18.12■□□□□ 0.49
PTP4A3-206ENST00000524028 HEATR9A2RTY3 570 aa18.12■□□□□ 0.49
PTP4A3-206ENST00000524028 BLACEA4D250 179 aa18.12■□□□□ 0.49
PTP4A3-206ENST00000524028 ERI2A8K979 691 aaKnown RBP18.12■□□□□ 0.49
PTP4A3-206ENST00000524028 C9J4A7 227 aa18.12■□□□□ 0.49
PTP4A3-206ENST00000524028 OR56A5P0C7T3 313 aa18.12■□□□□ 0.49
PTP4A3-206ENST00000524028 ATXN8OSP0DMR3 200 aa18.12■□□□□ 0.49
PTP4A3-206ENST00000524028 STIP1P31948 543 aaKnown RBP18.12■□□□□ 0.49
PTP4A3-206ENST00000524028 CCR7P32248 378 aa18.12■□□□□ 0.49
PTP4A3-206ENST00000524028 CSE1LP55060 971 aaKnown RBP18.12■□□□□ 0.49
PTP4A3-206ENST00000524028 FOXL2P58012 376 aa18.12■□□□□ 0.49
PTP4A3-206ENST00000524028 ACVR1Q04771 509 aa18.12■□□□□ 0.49
PTP4A3-206ENST00000524028 RAPSNQ13702 412 aa18.12■□□□□ 0.49
PTP4A3-206ENST00000524028 SYTL3Q4VX76 610 aa18.12■□□□□ 0.49
PTP4A3-206ENST00000524028 PRR30Q53SZ7 412 aaPredicted RBP18.12■□□□□ 0.49
PTP4A3-206ENST00000524028 TSTD2Q5T7W7 516 aa18.12■□□□□ 0.49
PTP4A3-206ENST00000524028 MLIPQ5VWP3 458 aa18.12■□□□□ 0.49
PTP4A3-206ENST00000524028 RHBDD2Q6NTF9 364 aa18.12■□□□□ 0.49
PTP4A3-206ENST00000524028 GAS2L3Q86XJ1 694 aa18.12■□□□□ 0.49
PTP4A3-206ENST00000524028 VRK3Q8IV63 474 aa18.12■□□□□ 0.49
PTP4A3-206ENST00000524028 DNAJC22Q8N4W6 341 aa18.12■□□□□ 0.49
PTP4A3-206ENST00000524028 EFCAB3Q8N7B9 438 aa18.12■□□□□ 0.49
PTP4A3-206ENST00000524028 LMNTD1Q8N9Z9 388 aa18.12■□□□□ 0.49
PTP4A3-206ENST00000524028 LKAAEAR1Q8TD35 194 aa18.12■□□□□ 0.49
PTP4A3-206ENST00000524028 N4BP2L2Q92802 583 aaPredicted RBP18.12■□□□□ 0.49
PTP4A3-206ENST00000524028 GBP5Q96PP8 586 aa18.12■□□□□ 0.49
PTP4A3-206ENST00000524028 DHRS4Q9BTZ2 278 aa18.12■□□□□ 0.49
PTP4A3-206ENST00000524028 CHRNA10Q9GZZ6 450 aa18.12■□□□□ 0.49
PTP4A3-206ENST00000524028 DHCR7Q9UBM7 475 aaKnown RBP18.12■□□□□ 0.49
PTP4A3-206ENST00000524028 CDYLQ9Y232 598 aa18.12■□□□□ 0.49
PTP4A3-206ENST00000524028 PCDHGB7Q9Y5F8 929 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms