RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 ATXN3P54252 364 aaPredicted RBP7.39□□□□□ -1.23
HDAC3-216ENST00000523088 NR1H2P55055 460 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 PTENP60484 403 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 FOLH1Q04609 750 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 C16orf72Q14CZ0 275 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 CHRFAM7AQ494W8 412 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 KLHL26Q53HC5 615 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 ZNF468Q5VIY5 522 aaPredicted RBP7.39□□□□□ -1.23
HDAC3-216ENST00000523088 PLPP4Q5VZY2 271 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 RAET1GQ6H3X3 334 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 LETMD1Q6P1Q0 360 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 C1orf94Q6P1W5 598 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 POTEHQ6S545 545 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 CCNI2Q6ZMN8 369 aaPredicted RBP7.39□□□□□ -1.23
HDAC3-216ENST00000523088 LHFPL2Q6ZUX7 228 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 DDX53Q86TM3 631 aaKnown RBP7.39□□□□□ -1.23
HDAC3-216ENST00000523088 MTDHQ86UE4 582 aaKnown RBP7.39□□□□□ -1.23
HDAC3-216ENST00000523088 MON1AQ86VX9 555 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 ZBTB8OSQ8IWT0 167 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 RTL3Q8N8U3 475 aaKnown RBP7.39□□□□□ -1.23
HDAC3-216ENST00000523088 IL17RCQ8NAC3 791 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 KCTD6Q8NC69 237 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 PDPRQ8NCN5 879 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 Q8NFD4 153 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 OR8K5Q8NH50 307 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 DNAJB8Q8NHS0 232 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 TPCN2Q8NHX9 752 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 DTX3LQ8TDB6 740 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 CD300LFQ8TDQ1 290 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 THRSPQ92748 146 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 MTERF3Q96E29 417 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 MRPL48Q96GC5 212 aaKnown RBP7.39□□□□□ -1.23
HDAC3-216ENST00000523088 ABHD17AQ96GS6 310 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 DMRTB1Q96MA1 342 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 RIPOR3Q96MK2 946 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 SERPINB11Q96P15 392 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 ZNF416Q9BWM5 594 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 CDADC1Q9BWV3 514 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 MRPS26Q9BYN8 205 aaKnown RBP7.39□□□□□ -1.23
HDAC3-216ENST00000523088 OSGEPQ9NPF4 335 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 GSN-AS1Q9NRJ2 163 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 KRT84Q9NSB2 600 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 SIRT3Q9NTG7 399 aaPredicted RBP7.39□□□□□ -1.23
HDAC3-216ENST00000523088 TBC1D13Q9NVG8 400 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 PRMT7Q9NVM4 692 aaPredicted RBP7.39□□□□□ -1.23
HDAC3-216ENST00000523088 SMARCAL1Q9NZC9 954 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 NPAP1Q9NZP6 1156 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 RBMX2Q9Y388 322 aaKnown RBP7.39□□□□□ -1.23
HDAC3-216ENST00000523088 KCTD3Q9Y597 815 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 SNX13Q9Y5W8 968 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 CITO14578 2027 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 DENND4AQ7Z401 1863 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 C5orf42Q9H799 3197 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 A0A087WV62 115 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 A0A0J9YYE9 177 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 hCG_1807616A0A1W2PRN6 198 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 TMEM150BA6NC51 233 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 H3BNX3 289 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 EIF3DO15371 548 aaKnown RBP eCLIP7.38□□□□□ -1.23
HDAC3-216ENST00000523088 TBC1D4O60343 1298 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 NOBOXO60393 691 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 CCNT2O60583 730 aaKnown RBP7.38□□□□□ -1.23
HDAC3-216ENST00000523088 JAK2O60674 1132 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 ERAL1O75616 437 aaKnown RBP7.38□□□□□ -1.23
HDAC3-216ENST00000523088 RHOBTB1O94844 696 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 ZWINTO95229 277 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 GLP2RO95838 553 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 IFNA2P01563 188 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 IFNGP01579 166 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 TRBC1P01850 177 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 FBP1P09467 338 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 CD3GP09693 182 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 H2AFB2P0C5Z0 115 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 LINC00614P0C842 121 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 RARAP10276 462 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 CTSAP10619 480 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 ITGA4P13612 1032 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 ATF2P15336 505 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 CYP11B1P15538 503 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 TNNI3P19429 210 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 CYP2A7P20853 494 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 ADH6P28332 368 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 CORO1AP31146 461 aaKnown RBP7.38□□□□□ -1.23
HDAC3-216ENST00000523088 MCM7P33993 719 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 ARL1P40616 181 aaPredicted RBP7.38□□□□□ -1.23
HDAC3-216ENST00000523088 FXR2P51116 673 aaKnown RBP eCLIP7.38□□□□□ -1.23
HDAC3-216ENST00000523088 EFNA5P52803 228 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 SELENOVP59797 346 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 ERVFC1P60507 584 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 ACTR3P61158 418 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 GNG11P61952 73 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 PTSQ03393 145 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 SRSF11Q05519 484 aaKnown RBP7.38□□□□□ -1.23
HDAC3-216ENST00000523088 CTTNQ14247 550 aaKnown RBP7.38□□□□□ -1.23
HDAC3-216ENST00000523088 PDK2Q15119 407 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 CDK10Q15131 360 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 POU4F3Q15319 338 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 USF2Q15853 346 aaPredicted RBP7.38□□□□□ -1.23
HDAC3-216ENST00000523088 FAM187BQ17R55 369 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 BMT2Q1RMZ1 405 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms