RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 ESR1P03372 595 aa17.31■□□□□ 0.36
CLK4-211ENST00000522556 ST6GAL1P15907 406 aa17.31■□□□□ 0.36
CLK4-211ENST00000522556 PGGT1BP53609 377 aa17.31■□□□□ 0.36
CLK4-211ENST00000522556 ADARP55265 1226 aaKnown RBP17.31■□□□□ 0.36
CLK4-211ENST00000522556 CXADRP78310 365 aa17.31■□□□□ 0.36
CLK4-211ENST00000522556 CUL1Q13616 776 aa17.31■□□□□ 0.36
CLK4-211ENST00000522556 TMED2Q15363 201 aa17.31■□□□□ 0.36
CLK4-211ENST00000522556 HIF1AQ16665 826 aa17.31■□□□□ 0.36
CLK4-211ENST00000522556 DCAF12Q5T6F0 453 aa17.31■□□□□ 0.36
CLK4-211ENST00000522556 ARMC6Q6NXE6 501 aa17.31■□□□□ 0.36
CLK4-211ENST00000522556 OTOAQ7RTW8 1153 aa17.31■□□□□ 0.36
CLK4-211ENST00000522556 ZNF572Q7Z3I7 529 aaPredicted RBP17.31■□□□□ 0.36
CLK4-211ENST00000522556 TAX1BP1Q86VP1 789 aa17.31■□□□□ 0.36
CLK4-211ENST00000522556 C2orf73Q8N5S3 287 aaPredicted RBP17.31■□□□□ 0.36
CLK4-211ENST00000522556 SIDT2Q8NBJ9 832 aaKnown RBP17.31■□□□□ 0.36
CLK4-211ENST00000522556 NDNQ99608 321 aa17.31■□□□□ 0.36
CLK4-211ENST00000522556 TSSK1BQ9BXA7 367 aa17.31■□□□□ 0.36
CLK4-211ENST00000522556 FBXO8Q9NRD0 319 aa17.31■□□□□ 0.36
CLK4-211ENST00000522556 INTS10Q9NVR2 710 aaKnown RBP17.31■□□□□ 0.36
CLK4-211ENST00000522556 ACTR10Q9NZ32 417 aa17.31■□□□□ 0.36
CLK4-211ENST00000522556 SLC9B1P1A6NJY1 282 aa17.3■□□□□ 0.36
CLK4-211ENST00000522556 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.3■□□□□ 0.36
CLK4-211ENST00000522556 CHRM5P08912 532 aaPredicted RBP17.3■□□□□ 0.36
CLK4-211ENST00000522556 CHRM3P20309 590 aa17.3■□□□□ 0.36
CLK4-211ENST00000522556 PRDX3P30048 256 aaKnown RBP17.3■□□□□ 0.36
CLK4-211ENST00000522556 PKLRP30613 574 aa17.3■□□□□ 0.36
CLK4-211ENST00000522556 CLCN7P51798 805 aa17.3■□□□□ 0.36
CLK4-211ENST00000522556 RAB15P59190 212 aa17.3■□□□□ 0.36
CLK4-211ENST00000522556 TIAL1Q01085 375 aaKnown RBP eCLIP17.3■□□□□ 0.36
CLK4-211ENST00000522556 PLOD1Q02809 727 aaPredicted RBP17.3■□□□□ 0.36
CLK4-211ENST00000522556 GPR19Q15760 415 aa17.3■□□□□ 0.36
CLK4-211ENST00000522556 SPANXN3Q5MJ09 141 aa17.3■□□□□ 0.36
CLK4-211ENST00000522556 RBM20Q5T481 1227 aaKnown RBP17.3■□□□□ 0.36
CLK4-211ENST00000522556 TMEM164Q5U3C3 297 aa17.3■□□□□ 0.36
CLK4-211ENST00000522556 STEAP4Q687X5 459 aa17.3■□□□□ 0.36
CLK4-211ENST00000522556 PDIK1LQ8N165 341 aa17.3■□□□□ 0.36
CLK4-211ENST00000522556 ZBTB2Q8N680 514 aa17.3■□□□□ 0.36
CLK4-211ENST00000522556 LINC01555Q8NAE3 123 aa17.3■□□□□ 0.36
CLK4-211ENST00000522556 C2CD4AQ8NCU7 369 aaPredicted RBP17.3■□□□□ 0.36
CLK4-211ENST00000522556 UBXN4Q92575 508 aa17.3■□□□□ 0.36
CLK4-211ENST00000522556 NKD1Q969G9 470 aa17.3■□□□□ 0.36
CLK4-211ENST00000522556 CERS2Q96G23 380 aa17.3■□□□□ 0.36
CLK4-211ENST00000522556 CD180Q99467 661 aa17.3■□□□□ 0.36
CLK4-211ENST00000522556 ERP44Q9BS26 406 aa17.3■□□□□ 0.36
CLK4-211ENST00000522556 DPH1Q9BZG8 443 aa17.3■□□□□ 0.36
CLK4-211ENST00000522556 TWSG1Q9GZX9 223 aa17.3■□□□□ 0.36
CLK4-211ENST00000522556 ZFYVE26Q68DK2 2539 aa17.3■□□□□ 0.36
CLK4-211ENST00000522556 SPTBP11277 2137 aa17.29■□□□□ 0.36
CLK4-211ENST00000522556 FAM187AA6NFU0 413 aa17.29■□□□□ 0.36
CLK4-211ENST00000522556 F8W8V4 182 aa17.29■□□□□ 0.36
CLK4-211ENST00000522556 POLR1CO15160 346 aaPredicted RBP17.29■□□□□ 0.36
CLK4-211ENST00000522556 RAD1O60671 282 aa17.29■□□□□ 0.36
CLK4-211ENST00000522556 PIAS1O75925 651 aa17.29■□□□□ 0.36
CLK4-211ENST00000522556 URI1O94763 535 aaPredicted RBP17.29■□□□□ 0.36
CLK4-211ENST00000522556 STK17BO94768 372 aa17.29■□□□□ 0.36
CLK4-211ENST00000522556 UGT2B7P16662 529 aa17.29■□□□□ 0.36
CLK4-211ENST00000522556 CDH3P22223 829 aa17.29■□□□□ 0.36
CLK4-211ENST00000522556 CARSP49589 748 aaKnown RBP17.29■□□□□ 0.36
CLK4-211ENST00000522556 ARL4CP56559 192 aa17.29■□□□□ 0.36
CLK4-211ENST00000522556 PDIA2Q13087 525 aaKnown RBP17.29■□□□□ 0.36
CLK4-211ENST00000522556 PRKAA1Q13131 559 aa17.29■□□□□ 0.36
CLK4-211ENST00000522556 TUBB3Q13509 450 aa17.29■□□□□ 0.36
CLK4-211ENST00000522556 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.29■□□□□ 0.36
CLK4-211ENST00000522556 PLEKHS1Q5SXH7 462 aa17.29■□□□□ 0.36
CLK4-211ENST00000522556 ARHGAP40Q5TG30 622 aa17.29■□□□□ 0.36
CLK4-211ENST00000522556 DUPD1Q68J44 220 aa17.29■□□□□ 0.36
CLK4-211ENST00000522556 CEACAM20Q6UY09 585 aa17.29■□□□□ 0.36
CLK4-211ENST00000522556 DCUN1D3Q8IWE4 304 aa17.29■□□□□ 0.36
CLK4-211ENST00000522556 FBXO36Q8NEA4 188 aa17.29■□□□□ 0.36
CLK4-211ENST00000522556 SKA2Q8WVK7 121 aaPredicted RBP17.29■□□□□ 0.36
CLK4-211ENST00000522556 ZNF592Q92610 1267 aa17.29■□□□□ 0.36
CLK4-211ENST00000522556 OR2A14Q96R47 310 aa17.29■□□□□ 0.36
CLK4-211ENST00000522556 GPR21Q99679 349 aa17.29■□□□□ 0.36
CLK4-211ENST00000522556 FAM167BQ9BTA0 163 aa17.29■□□□□ 0.36
CLK4-211ENST00000522556 PITPNM3Q9BZ71 974 aa17.29■□□□□ 0.36
CLK4-211ENST00000522556 B3GNT4Q9C0J1 378 aa17.29■□□□□ 0.36
CLK4-211ENST00000522556 ZC3H7BQ9UGR2 993 aaKnown RBP17.29■□□□□ 0.36
CLK4-211ENST00000522556 CDC23Q9UJX2 597 aa17.29■□□□□ 0.36
CLK4-211ENST00000522556 PILRAQ9UKJ1 303 aa17.29■□□□□ 0.36
CLK4-211ENST00000522556 E7ESA3 106 aa17.28■□□□□ 0.36
CLK4-211ENST00000522556 STMND1H3BQB6 276 aa17.28■□□□□ 0.36
CLK4-211ENST00000522556 HCRTR1O43613 425 aa17.28■□□□□ 0.36
CLK4-211ENST00000522556 C1orf105O95561 183 aa17.28■□□□□ 0.36
CLK4-211ENST00000522556 DLGAP3O95886 979 aa17.28■□□□□ 0.36
CLK4-211ENST00000522556 SHMT2P34897 504 aa17.28■□□□□ 0.36
CLK4-211ENST00000522556 SLC7A5Q01650 507 aa17.28■□□□□ 0.36
CLK4-211ENST00000522556 ZIC1Q15915 447 aa17.28■□□□□ 0.36
CLK4-211ENST00000522556 KYNUQ16719 465 aa17.28■□□□□ 0.36
CLK4-211ENST00000522556 PRAMEF17Q5VTA0 474 aa17.28■□□□□ 0.36
CLK4-211ENST00000522556 UNC5DQ6UXZ4 953 aa17.28■□□□□ 0.36
CLK4-211ENST00000522556 CAPN12Q6ZSI9 719 aa17.28■□□□□ 0.36
CLK4-211ENST00000522556 D2HGDHQ8N465 521 aa17.28■□□□□ 0.36
CLK4-211ENST00000522556 CD200R1Q8TD46 325 aa17.28■□□□□ 0.36
CLK4-211ENST00000522556 DENND1AQ8TEH3 1009 aa17.28■□□□□ 0.36
CLK4-211ENST00000522556 TRAPPC9Q96Q05 1148 aa17.28■□□□□ 0.36
CLK4-211ENST00000522556 AARSD1Q9BTE6 412 aaKnown RBP17.28■□□□□ 0.36
CLK4-211ENST00000522556 ASPSCR1Q9BZE9 553 aa17.28■□□□□ 0.36
CLK4-211ENST00000522556 SOHLH2Q9NX45 425 aa17.28■□□□□ 0.36
CLK4-211ENST00000522556 BTRCQ9Y297 605 aa17.28■□□□□ 0.36
CLK4-211ENST00000522556 KLHL20Q9Y2M5 609 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms