RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 NKX3-2P78367 333 aa9.94□□□□□ -0.82
MCF2-209ENST00000520602 TAGAPQ8N103 731 aa9.94□□□□□ -0.82
MCF2-209ENST00000520602 RNF217Q8TC41 542 aa9.94□□□□□ -0.82
MCF2-209ENST00000520602 BADQ92934 168 aa9.94□□□□□ -0.82
MCF2-209ENST00000520602 VN1R3Q9BXE9 311 aa9.94□□□□□ -0.82
MCF2-209ENST00000520602 PNPLA3Q9NST1 481 aa9.94□□□□□ -0.82
MCF2-209ENST00000520602 SLAMF8Q9P0V8 285 aa9.94□□□□□ -0.82
MCF2-209ENST00000520602 ACTR3BQ9P1U1 418 aa9.94□□□□□ -0.82
MCF2-209ENST00000520602 IKZF3Q9UKT9 509 aa9.94□□□□□ -0.82
MCF2-209ENST00000520602 AXIN1O15169 862 aa9.94□□□□□ -0.82
MCF2-209ENST00000520602 SLC6A2P23975 617 aa9.94□□□□□ -0.82
MCF2-209ENST00000520602 VIPR2P41587 438 aa9.94□□□□□ -0.82
MCF2-209ENST00000520602 CRATP43155 626 aa9.94□□□□□ -0.82
MCF2-209ENST00000520602 PSMD8P48556 350 aa9.94□□□□□ -0.82
MCF2-209ENST00000520602 NR1H2P55055 460 aa9.94□□□□□ -0.82
MCF2-209ENST00000520602 CASP9P55211 416 aa9.94□□□□□ -0.82
MCF2-209ENST00000520602 PRKCQQ04759 706 aa9.94□□□□□ -0.82
MCF2-209ENST00000520602 ACVR1Q04771 509 aa9.94□□□□□ -0.82
MCF2-209ENST00000520602 ADRM1Q16186 407 aa9.94□□□□□ -0.82
MCF2-209ENST00000520602 SLC44A4Q53GD3 710 aa9.94□□□□□ -0.82
MCF2-209ENST00000520602 CHSY3Q70JA7 882 aa9.94□□□□□ -0.82
MCF2-209ENST00000520602 DSG4Q86SJ6 1040 aa9.94□□□□□ -0.82
MCF2-209ENST00000520602 PHACTR4Q8IZ21 702 aa9.94□□□□□ -0.82
MCF2-209ENST00000520602 TCAIMQ8N3R3 496 aa9.94□□□□□ -0.82
MCF2-209ENST00000520602 RAB42Q8N4Z0 105 aa9.94□□□□□ -0.82
MCF2-209ENST00000520602 PPP1R16AQ96I34 528 aa9.94□□□□□ -0.82
MCF2-209ENST00000520602 TUBB1Q9H4B7 451 aa9.94□□□□□ -0.82
MCF2-209ENST00000520602 RAD18Q9NS91 495 aa9.94□□□□□ -0.82
MCF2-209ENST00000520602 IL36AQ9UHA7 158 aa9.94□□□□□ -0.82
MCF2-209ENST00000520602 QSOX1O00391 747 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 SAP18O00422 153 aaKnown RBP9.93□□□□□ -0.82
MCF2-209ENST00000520602 WNT9AO14904 365 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 DFNA5O60443 496 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 PFDN1O60925 122 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 RECQL5O94762 991 aaPredicted RBP9.93□□□□□ -0.82
MCF2-209ENST00000520602 FGF19O95750 216 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 PGRP06401 933 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 EPCAMP16422 314 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 RAD23AP54725 363 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 CDH15P55291 814 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 ERVFC1P60507 584 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 CYP4F2P78329 520 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 CYP4F3Q08477 520 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 HTR3DQ70Z44 454 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 PHYKPLQ8IUZ5 450 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 MMAAQ8IVH4 418 aaKnown RBP9.93□□□□□ -0.82
MCF2-209ENST00000520602 FUNDC1Q8IVP5 155 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 AHI1Q8N157 1196 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 MAGED4Q96JG8 741 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 MAELQ96JY0 434 aaKnown RBP9.93□□□□□ -0.82
MCF2-209ENST00000520602 RIBC2Q9H4K1 309 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 CMTM6Q9NX76 183 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 BLOC1S6Q9UL45 172 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 ERVW-1Q9UQF0 538 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 PRKAB1Q9Y478 270 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 OARD1Q9Y530 152 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 ASB1Q9Y576 335 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 A0A087WXM4 84 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 KRT87PA6NCN2 255 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 PRNPP04156 253 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 VIPR1P32241 457 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 RPS9P46781 194 aaKnown RBP9.93□□□□□ -0.82
MCF2-209ENST00000520602 SPINT3P49223 89 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 HK3P52790 923 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 OGFRL1Q5TC84 451 aaPredicted RBP9.93□□□□□ -0.82
MCF2-209ENST00000520602 ZBTB46Q86UZ6 589 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 ADHFE1Q8IWW8 467 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 TRPV3Q8NET8 790 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 BIRC7Q96CA5 298 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 ADI1Q9BV57 179 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 OGDHLQ9ULD0 1010 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 IL6P05231 212 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 ANXA4P09525 319 aaPredicted RBP9.93□□□□□ -0.82
MCF2-209ENST00000520602 ADH5P11766 374 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 BDKRB1P46663 353 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 EEFSECP57772 596 aaKnown RBP9.93□□□□□ -0.82
MCF2-209ENST00000520602 PWP1Q13610 501 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 GPNMBQ14956 572 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 LRRC26Q2I0M4 334 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 FRG2Q64ET8 278 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 OR4F3Q6IEY1 312 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 TMEM26Q6ZUK4 368 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 PGBD3Q8N328 593 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 NUDT8Q8WV74 236 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 NELL1Q92832 810 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 KLK6Q92876 244 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 SLC47A1Q96FL8 570 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 ZNF641Q96N77 438 aaPredicted RBP9.93□□□□□ -0.82
MCF2-209ENST00000520602 FRG2BQ96QU4 278 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 MRPS26Q9BYN8 205 aaKnown RBP9.93□□□□□ -0.82
MCF2-209ENST00000520602 POLR1BQ9H9Y6 1135 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 CLK4Q9HAZ1 481 aaKnown RBP9.93□□□□□ -0.82
MCF2-209ENST00000520602 PADI4Q9UM07 663 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 ITM2BQ9Y287 266 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 F5P12259 2224 aa9.93□□□□□ -0.82
MCF2-209ENST00000520602 SMIM31A0A1B0GVY4 71 aa9.92□□□□□ -0.82
MCF2-209ENST00000520602 FPGTO14772 594 aa9.92□□□□□ -0.82
MCF2-209ENST00000520602 TSPAN6O43657 245 aa9.92□□□□□ -0.82
MCF2-209ENST00000520602 MMP20O60882 483 aa9.92□□□□□ -0.82
MCF2-209ENST00000520602 EBLN1P0CF75 366 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms