RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 CRB1P82279 1406 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 A0A0G2JNG1 304 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 FAM172BPA6NC97 362 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 GLOD5A6NK44 160 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 H0YIN7 160 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 AHCYL1O43865 530 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 GJB3O75712 270 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 STARD3NLO95772 234 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 LDLRP01130 860 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 IGHV4-39P01824 125 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 TUBBP07437 444 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 LDHCP07864 332 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 PNMA6AP0CW24 399 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 VPREB1P12018 145 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 TRIM21P19474 475 aaKnown RBP3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 MCCP23508 829 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 BDNFP23560 247 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 NMBRP28336 390 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 HSD17B4P51659 736 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 DVL1P1P54792 670 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 CD81P60033 236 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 SNRPEP62304 92 aaKnown RBP3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 PPP2R2BQ00005 443 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 ARL16Q0P5N6 197 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 KIR2DS5Q14953 304 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 DLG2Q15700 870 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 DHRS7BQ6IAN0 325 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 SYT10Q6XYQ8 523 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 ZNF852Q6ZMS4 543 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 RPAINQ86UA6 219 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 GBGT1Q8N5D6 347 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 LMNTD1Q8N9Z9 388 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 LMLNQ96KR4 655 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 EPYCQ99645 322 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 KCNK15Q9H427 330 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 PDE7BQ9NP56 450 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 FAM118AQ9NWS6 357 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 TAS2R14Q9NYV8 317 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 RAI14Q9P0K7 980 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 LARSQ9P2J5 1176 aaKnown RBP3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 HACL1Q9UJ83 578 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 RPS6KA6Q9UK32 745 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 PTRH2Q9Y3E5 179 aaKnown RBP3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 JRKLQ9Y4A0 524 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 CHD2O14647 1828 aaKnown RBP3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 TAF1P21675 1872 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 ASTN2O75129 1339 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 TTC21AQ8NDW8 1320 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 ANKRD26Q9UPS8 1709 aa3.13□□□□□ -1.91
HMGB1P41-201ENST00000520234 KDRP35968 1356 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 TMEM2Q9UHN6 1383 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 PTPRUQ92729 1446 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 IGLV5-45A0A087WSX0 123 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 A0A1W2PPI3 338 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 PLK4O00444 970 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 ADAMDEC1O15204 470 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 ATP8B1O43520 1251 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 FGF17O60258 216 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 GPR137BO60478 399 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 PRAMEF11O60813 436 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 WISP2O76076 250 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 CSPG5O95196 566 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 PGM3O95394 542 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 CRYAAP02489 173 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 TFAP2AP05549 437 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 NR2F1P10589 423 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 NNMTP40261 264 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 GTF2A1P52655 376 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 GRAPQ13588 217 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 MELKQ14680 651 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 KIR2DS3Q14952 304 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 NR1D2Q14995 579 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 DUOXA1Q1HG43 343 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 FAM98BQ52LJ0 330 aaKnown RBP3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 FAM76BQ5HYJ3 339 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 SIRPB2Q5JXA9 342 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 GCNT6Q5T4J0 391 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 STXBP5Q5T5C0 1151 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 CFAP58Q5T655 872 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 TMCO3Q6UWJ1 677 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 PLXDC2Q6UX71 529 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 RAD9BQ6WBX8 426 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 RBM43Q6ZSC3 357 aaKnown RBP3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 HAUS6Q7Z4H7 955 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 AACSQ86V21 672 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 LONP2Q86WA8 852 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 PLA2G4DQ86XP0 818 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 DNAAF5Q86Y56 855 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 GUF1Q8N442 669 aaKnown RBP3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 MINDY1Q8N5J2 469 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 SYT2Q8N9I0 419 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 PAPD5Q8NDF8 572 aaKnown RBP3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 APPL2Q8NEU8 664 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 TBC1D16Q8TBP0 767 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 PTPMT1Q8WUK0 201 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 HES6Q96HZ4 224 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 NEUROD6Q96NK8 337 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 INPP4AQ96PE3 977 aaPredicted RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms