RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 CIPCQ9C0C6 399 aa6.53□□□□□ -1.36
CDH12-203ENST00000517378 CLPBQ9H078 707 aa6.53□□□□□ -1.36
CDH12-203ENST00000517378 KCNH6Q9H252 994 aa6.53□□□□□ -1.36
CDH12-203ENST00000517378 TRIT1Q9H3H1 467 aaKnown RBP6.53□□□□□ -1.36
CDH12-203ENST00000517378 SARS2Q9NP81 518 aaKnown RBP6.53□□□□□ -1.36
CDH12-203ENST00000517378 SERHLQ9NQF3 203 aa6.53□□□□□ -1.36
CDH12-203ENST00000517378 PAK1IP1Q9NWT1 392 aaPredicted RBP6.53□□□□□ -1.36
CDH12-203ENST00000517378 OPTCQ9UBM4 332 aa6.53□□□□□ -1.36
CDH12-203ENST00000517378 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.53□□□□□ -1.36
CDH12-203ENST00000517378 UTS2RQ9UKP6 389 aa6.53□□□□□ -1.36
CDH12-203ENST00000517378 TDRKHQ9Y2W6 561 aaKnown RBP6.53□□□□□ -1.36
CDH12-203ENST00000517378 OR51B4Q9Y5P0 310 aa6.53□□□□□ -1.36
CDH12-203ENST00000517378 CORINQ9Y5Q5 1042 aa6.53□□□□□ -1.36
CDH12-203ENST00000517378 HSPE1-MOB4S4R3N1 261 aa6.53□□□□□ -1.36
CDH12-203ENST00000517378 ANKRD12Q6UB98 2062 aa6.53□□□□□ -1.36
CDH12-203ENST00000517378 LOC100130705A0A1B0GUX0 176 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 SERTM1A2A2V5 107 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 FUOMA2VDF0 154 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 K7EPI3 171 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 GFRA2O00451 464 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 WNT9AO14904 365 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 MRPS14O60783 128 aaKnown RBP6.52□□□□□ -1.37
CDH12-203ENST00000517378 UGT2B11O75310 529 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 RECQL5O94762 991 aaPredicted RBP6.52□□□□□ -1.37
CDH12-203ENST00000517378 PRKD3O94806 890 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 PGLSO95336 258 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 GJB5O95377 273 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 SEMG1P04279 462 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 TFPTP0C1Z6 253 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 JUNDP17535 347 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 ACRV1P26436 265 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 IST1P53990 364 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 GP2P55259 537 aaKnown RBP6.52□□□□□ -1.37
CDH12-203ENST00000517378 CRHR2Q13324 411 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 NFATC2Q13469 925 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 AQP6Q13520 282 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 ACOX1Q15067 660 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 PTPRRQ15256 657 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 CTF1Q16619 201 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 CDKN3Q16667 212 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 RTP2Q5QGT7 225 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 HECTD3Q5T447 861 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 CAPN13Q6MZZ7 669 aaPredicted RBP6.52□□□□□ -1.37
CDH12-203ENST00000517378 TMEM179BQ7Z7N9 219 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 SERPINA9Q86WD7 417 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 RGL4Q8IZJ4 473 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 KLHL23Q8NBE8 558 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 BPIFB6Q8NFQ5 453 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 PIH1D2Q8WWB5 315 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 SGCDQ92629 289 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 FAM162AQ96A26 154 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 VMP1Q96GC9 406 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 MYO19Q96H55 970 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 REXO5Q96IC2 774 aaKnown RBP6.52□□□□□ -1.37
CDH12-203ENST00000517378 THUMPD3Q9BV44 507 aaKnown RBP6.52□□□□□ -1.37
CDH12-203ENST00000517378 ADNPQ9H2P0 1102 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 LRTM1Q9HBL6 345 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 C1orf109Q9NX04 203 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 KLHL42Q9P2K6 505 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 INVSQ9Y283 1065 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 OBSL1O75147 1896 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 AGAP14A8MT82 685 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 CFAP99D6REC4 459 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 E9PQ18 207 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 BCAS1O75363 584 aaPredicted RBP6.52□□□□□ -1.37
CDH12-203ENST00000517378 ULK1O75385 1050 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 PRAMEF1O95521 474 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 PRAMEF12O95522 483 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 EFEMP2O95967 443 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 FUCA1P04066 466 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 OCM2P0CE71 109 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 OCMP0CE72 109 aaPredicted RBP6.52□□□□□ -1.37
CDH12-203ENST00000517378 CBSLP0DN79 551 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 CBSP35520 551 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 GGT5P36269 586 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 SLC11A1P49279 550 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 BCAP31P51572 246 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 ARPP19P56211 112 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 CLDN8P56748 225 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 HUNKP57058 714 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 CXCR4P61073 352 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 RELAQ04206 551 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 TRIM32Q13049 653 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 BOP1Q14137 746 aaKnown RBP6.52□□□□□ -1.37
CDH12-203ENST00000517378 KEAP1Q14145 624 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 NR1D2Q14995 579 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 SPCS2Q15005 226 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 PHKG1Q16816 387 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 MEP1AQ16819 746 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 TTLL9Q3SXZ7 439 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 PTRHD1Q6GMV3 140 aaKnown RBP6.52□□□□□ -1.37
CDH12-203ENST00000517378 SLC8B1Q6J4K2 584 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 GALNT18Q6P9A2 607 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 C16orf87Q6PH81 154 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 SPESP1Q6UW49 350 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 FAM43BQ6ZT52 329 aaPredicted RBP6.52□□□□□ -1.37
CDH12-203ENST00000517378 GPR155Q7Z3F1 870 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 DCP2Q8IU60 420 aaKnown RBP6.52□□□□□ -1.37
CDH12-203ENST00000517378 FAM9CQ8IZT9 166 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 ELMOD1Q8N336 334 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms