RNA–Protein interactions for RNA: ENST00000517251.1

SCARNA20.6-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 106 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.6-201ENST00000517251 MAGED1Q9Y5V3 778 aaPredicted RBP3.18□□□□□ -1.9
SCARNA20.6-201ENST00000517251 PCDH15Q96QU1 1955 aa3.18□□□□□ -1.9
SCARNA20.6-201ENST00000517251 CEP290O15078 2479 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 PHF3Q92576 2039 aaKnown RBP3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 TNRC18O15417 2968 aaPredicted RBP3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 A0A096LPI6 279 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 A0A0J9YVX5 310 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 GLYATL1P3A0A0U1RQE8 302 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 C1orf232A0A0U1RR37 186 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 C1orf226A1L170 272 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 KLHL33A6NCF5 533 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 CCDC154A6NI56 674 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 ARHGEF33A8MVX0 844 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 FADS2P1A8MWK0 482 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 H0YAE9 185 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 H3BMQ9 156 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 GFYI3L273 518 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 FFAR3O14843 346 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 RAD51BO15315 384 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 INPP4BO15327 924 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 YY2O15391 372 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 TEX28O15482 410 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 GPR42O15529 346 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 HNRNPRO43390 633 aaKnown RBP3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 B4GAT1O43505 415 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 SYNCRIPO60506 623 aaKnown RBP3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 PQBP1O60828 265 aaKnown RBP3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 GPC4O75487 556 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 SLC22A3O75751 556 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 SEC14L2O76054 403 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 KLHL18O94889 574 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 ATE1O95260 518 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 PAPLNO95428 1278 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 CLDN7O95471 211 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 ETHE1O95571 254 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 IGSF6O95976 241 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 OTCP00480 354 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 GNRH1P01148 92 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 URODP06132 367 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 CTSLP07711 333 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 RETP07949 1114 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 ANXA6P08133 673 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 EBLN1P0CF75 366 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 MPC1LP0DKB6 136 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 CBSLP0DN79 551 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 RAP2AP10114 183 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 UMPSP11172 480 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 ITGAMP11215 1152 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 MBL2P11226 248 aaPredicted RBP3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 ATP6V1B1P15313 513 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 IL7RP16871 459 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 ZNF7P17097 686 aaPredicted RBP3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 ITGB6P18564 788 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 LAG3P18627 525 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 ITGALP20701 1170 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 PCMT1P22061 227 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 UGT1A1P22309 533 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 UGT1A4P22310 534 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 FASP25445 335 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 AOAHP28039 575 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 ELK4P28324 431 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 GABRR2P28476 465 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 HOXA9P31269 272 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 CCR7P32248 378 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 UGT1A3P35503 534 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 UGT1A5P35504 534 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 CBSP35520 551 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 TGFBR2P37173 567 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 MMP12P39900 470 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 DCTP40126 519 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 GDF5P43026 501 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 RPS9P46781 194 aaKnown RBP3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 PPP3CCP48454 512 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 PIK3CGP48736 1102 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 TUFMP49411 452 aaKnown RBP3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 PRLHRP49683 370 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 HLCSP50747 726 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 ALDH3A2P51648 485 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 RPS6KA3P51812 740 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 MVDP53602 400 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 IST1P53990 364 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 CCL23P55773 120 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 KCNK10P57789 538 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 GABARAPL2P60520 117 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 PFN3P60673 137 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 RAE1P78406 368 aaKnown RBP3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 HTRA4P83105 476 aaPredicted RBP3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 PTSQ03393 145 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 MESP2Q0VG99 397 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 GRSF1Q12849 480 aaKnown RBP eCLIP3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 MERTKQ12866 999 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 AQP6Q13520 282 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 DOC2BQ14184 412 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 INPP5AQ14642 412 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 CYP51A1Q16850 503 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 UGT8Q16880 541 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 DPY19L1Q2PZI1 675 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 TTLL9Q3SXZ7 439 aa3.17□□□□□ -1.9
SCARNA20.6-201ENST00000517251 FAM174BQ3ZCQ3 159 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms