RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 CCDC8Q9H0W5 538 aaPredicted RBP-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 MARCH7Q9H992 704 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 TBC1D17Q9HA65 648 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 NECTIN3Q9NQS3 549 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 SIRT7Q9NRC8 400 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 SLC6A13Q9NSD5 602 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 PIGVQ9NUD9 493 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 SPATS2LQ9NUQ6 558 aaKnown RBP-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 PIH1D1Q9NWS0 290 aaKnown RBP-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 ARMCX1Q9P291 453 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 MSRB2Q9Y3D2 182 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 HSPG2P98160 4391 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 IGSF9BQ9UPX0 1349 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 ADGRL1O94910 1474 aa-1.43□□□□□ -2.64
SNORA40.16-201ENST00000517238 PDZD2O15018 2839 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 TYW5A2RUC4 315 aaKnown RBP-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 FAM166BA8MTA8 275 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 ANKRD66B4E2M5 251 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 STX16-NPEPL1H3BU86 382 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 OFD1O75665 1012 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 CBX6O95503 412 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 IL1AP01583 271 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 HSPB1P04792 205 aaKnown RBP-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 RHOXF2BP0C7M4 288 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 PECAM1P16284 738 aaPredicted RBP-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 AOC1P19801 751 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 C5AR1P21730 350 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 GPD2P43304 727 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 FNTAP49354 379 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 ARSEP51690 589 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 MAP2K6P52564 334 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 EIF5P55010 431 aaKnown RBP-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 VCPP55072 806 aaKnown RBP-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 TLE3Q04726 772 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 BIRC3Q13489 604 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 ZNF267Q14586 743 aaPredicted RBP-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 SOWAHAQ2M3V2 549 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 HNRNPA1L2Q32P51 320 aaKnown RBP-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 ESCO2Q56NI9 601 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 NHSL2Q5HYW2 709 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 FBXO47Q5MNV8 452 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 NDUFAF5Q5TEU4 345 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 CNNM4Q6P4Q7 775 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 KLC3Q6P597 504 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 EMBQ6PCB8 327 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 ZNF600Q6ZNG1 722 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 C19orf35Q6ZS72 473 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 EPM2AIP1Q7L775 607 aaPredicted RBP-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 LURAP1LQ8IV03 231 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 LAX1Q8IWV1 398 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 ZNF683Q8IZ20 524 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 PCDH20Q8N6Y1 951 aaKnown RBP-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 AGBL3Q8NEM8 1001 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 OR52B6Q8NGF0 335 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 OR6X1Q8NH79 312 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 ROBO4Q8WZ75 1007 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 COA7Q96BR5 231 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 DNAJC1Q96KC8 554 aaKnown RBP-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 MRGPRX1Q96LB2 322 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 SLX1AQ9BQ83 275 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 HDHD5Q9BXW7 423 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 TRIM54Q9BYV2 358 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 SLC32A1Q9H598 525 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 CXorf56Q9H5V9 222 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 PARP11Q9NR21 331 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 MAN2C1Q9NTJ4 1040 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 GRHL1Q9NZI5 618 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 LEF1Q9UJU2 399 aaPredicted RBP-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 MID2Q9UJV3 735 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 GGA2Q9UJY4 613 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 SLC7A7Q9UM01 511 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 CAPN11Q9UMQ6 739 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 DHDHQ9UQ10 334 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 YIPF1Q9Y548 306 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 PAXBP1Q9Y5B6 917 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 COPG1Q9Y678 874 aaKnown RBP-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 CYP46A1Q9Y6A2 500 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 ZNF541Q9H0D2 1346 aa-1.44□□□□□ -2.64
SNORA40.16-201ENST00000517238 ZSWIM8A7E2V4 1837 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 RYR3Q15413 4870 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 CYP3A7-CYP3A51PA0A087WV96 503 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 C7orf66A4D0T2 115 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 K7EQD1 137 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 NKX2-8O15522 239 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 RIPK2O43353 540 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 BUD23O43709 281 aaKnown RBP-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 IGSF3O75054 1194 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 INMTO95050 263 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 ACSL3O95573 720 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 HNF1AP20823 631 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 CYP3A7P24462 503 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 NPY1RP25929 384 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 TTKP33981 857 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 SHMT1P34896 483 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 GRK5P34947 590 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 NSFP46459 744 aaKnown RBP-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 NRIP1P48552 1158 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 RIDAP52758 137 aaKnown RBP-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 PDX1P52945 283 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 FOXL2P58012 376 aa-1.45□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms